Cucumis melo (muskmelon): 103492361
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Entry
103492361 CDS
T03195
Name
(RefSeq) protein CTR9 homolog
KO
K15176
RNA polymerase-associated protein CTR9
Organism
cmo
Cucumis melo (muskmelon)
Brite
KEGG Orthology (KO) [BR:
cmo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cmo03021
]
103492361
Transcription machinery [BR:
cmo03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
PAF1 complex
103492361
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_1
TPR_2
TPR_12
TPR_8
TPR_19
TPR_16
TPR_14
TPR_17
TPR_CcmH_CycH
TPR_11
TPR_6
TPR_9
TPR_7
ARM_TT21_C
TPR_10
ANAPC3
ARM_TT21_5th
TPR_Slam
NatA_aux_su
Fis1_TPR_C
Motif
Other DBs
NCBI-GeneID:
103492361
NCBI-ProteinID:
XP_008450914
UniProt:
A0A1S3BQD3
LinkDB
All DBs
Position
2:2495269..2509096
Genome browser
AA seq
1077 aa
AA seq
DB search
MACVYIPVQNSEEEVRVALDQLPRDASDILDILKAEQAPLDLWLIIAREYFKQGKLEQFR
QILEEGSSPEIDEYYADVRYERIAILNALGAYYSYLGKIETKQREKEEHFILATQYYNKA
SRIDMHEPSTWVGKGQLLLTKGEVEQAFAAFKIVLDGDRDNVPALLGQACVEFNRGHYSE
SLELYKRALQVYPDCPAAVRLGIGLCRYQLKQYGKAQQAFERVLQLDPENVEALVALAII
DLNTNEAGRIRNGMEKMQRAFEIYPFCAMALNYLANHFFFTGQHFLVEQLTETALAITNH
GPTKSHSFYNLARSYHSKGDYEKAGLYYMASAKEANKPREFVFPYYGLGQVQLKMGDLRS
ALSNFEKVLEVYPDNCETLKVLGHIYVQLGQAEKAQESLRKATKIDPRDAQAFLDLGELL
ISTDEGAALDAFKTASILLRKGGQEVPIEVLNNLGVLHFEREEFELAERIFKEALGDGIW
LDFIDGKVRCPAIEASASVLQYKNVELFYQLEREGRAIVLPWKKVTSLFNLARLLEQLHR
IEVSSVLYRLILFKYPDYVDAYLRLASIAKARNYVQLSIELVNDALKVNDKCSNALSMLG
ELELKNDDWVRAKETFRAAGEATDGKDSYATLSLGNWNYFAALRNEKRNPKLEATHLEKS
KELYTRVLVQHPANLYAANGAGVILAEKGQFDVSKDIFTQVQEAASGNIFVQMPDVWINL
AHVYFAQGNFSLAVKMYQNCLRKFYYNTDYQILLYLARTYYEAEQWQDCKKTLLRAIHLA
PSNYTLRFDAGVAMQKFSASTLQKTKRTADEVRSTVAELENAVRVFSQLSAASNLHFHGF
DEKKIDTHVGYCKHLLEAAGVHLKAAEHEEQQIRQRQELARQVALAEDARRKADEQRKFQ
LERRKLEDEEKRMMQQEQHFKRVKEQWKSTTPAKRRERSEIDDDEAGNSEKRRRKGGKRR
KKDRKGKSHYETEEADNDMMDDQELYNEDNNIGYRESRSQVNDQVDDFEGNDQDALAEAG
LEDSDAEDEAGAPSSNAARRRATWSDSEEDEPIDTQRESRLQRENSAGLEDSDGEIR
NT seq
3234 nt
NT seq
+upstream
nt +downstream
nt
atggcttgtgtgtacataccggtacagaactcggaggaggaggtcagggtagctctcgat
caactccctagggacgcttccgacattctcgacatacttaaagcggagcaagcgccgtta
gatctttggctaatcatcgcgagggaatacttcaagcaaggaaaactagaacaattccgc
caaattctggaggaagggtccagtccagaaattgatgaatactatgctgatgttagatat
gaaagaattgcaatcttaaatgccttgggtgcttactacagctatcttggaaaaattgag
acaaaacaacgagaaaaagaagaacatttcattttggctacacaatattacaacaaagca
tccagaattgatatgcatgaaccttcaacttgggttggaaaaggtcagcttttattgacc
aaaggggaagtagaacaggcatttgctgcattcaagattgttttagatggagatcgtgac
aatgttcctgcccttctaggacaagcatgtgttgaattcaaccgtggacattattctgaa
tcattagagctatacaagagggccttgcaagtgtatcctgattgccctgctgctgtaaga
cttggcataggcctttgccgctaccaattgaaacaatatggaaaagctcagcaagcattt
gagagagtgttacagttggatccagaaaatgttgaggctcttgttgctctagcaatcatt
gatctgaacacgaatgaagctggtcgaatcagaaatggaatggaaaagatgcagagggca
tttgaaatataccctttttgtgcaatggctctgaattacttggctaatcactttttcttt
actggtcaacactttttggtggagcaattgactgaaactgcacttgccattaccaaccat
ggacctacaaagtctcattctttttataatcttgctcgatcttaccacagcaagggagac
tatgaaaaagctggcttgtactacatggcatctgctaaggaagctaataaaccccgcgag
tttgtatttccttattatggtttgggtcaggttcaactgaagatgggagatcttagaagt
gcattatcaaattttgagaaggttttggaggtttatcctgacaactgtgagacattgaaa
gtactcggtcatatttatgttcagcttggacaggctgagaaggcccaggagtctttaagg
aaagctacaaaaattgatccacgtgatgcacaggctttcttagatctcggagaattgctg
atttcaactgatgaaggcgctgctttggatgccttcaaaactgctagcattttgttaaga
aagggaggtcaagaagtcccaattgaagtgctcaacaatcttggggttcttcactttgaa
agagaagagtttgagcttgctgagcgaattttcaaggaggctttaggtgatggaatttgg
ctagattttattgatggtaaagtgagatgccctgctattgaagcaagtgcgtctgttctt
caatacaagaacgtggaattattttatcaactggagagggaaggccgtgcaattgtacta
ccatggaagaaagtcacaagtctatttaaccttgctcgattactagagcaattgcataga
attgaagtttcaagtgtactctacaggttgattttgtttaagtatccagactatgtagac
gcttatttgaggcttgcatccattgcaaaagctagaaattatgttcaattaagcattgaa
ttggttaatgatgctctgaaggtgaatgacaagtgctcaaatgccttgtctatgctaggt
gagcttgagttaaaaaatgatgactgggttagggcaaaagaaactttccgagctgccggt
gaagctaccgatggaaaggattcttatgccactctttctctggggaactggaactacttt
gctgctcttcgaaatgagaaaagaaatcccaagttggaggctactcatttggaaaaatcc
aaggaactatatacgagggttctggtacaacatccagctaatttgtatgctgctaatggc
gctggggtaatcttggctgaaaaaggtcaatttgatgtttcaaaagatattttcacacaa
gttcaagaagctgcaagtggcaacatttttgttcagatgccagatgtgtggatcaatttg
gcacatgtctattttgctcaaggaaatttttcattagctgttaaaatgtatcaaaattgc
ttgcggaagttttattacaatacggattatcaaattcttctatatctagctcgtacgtat
tatgaagctgagcagtggcaagactgcaaaaagactctactaagagctatccacttggca
ccttcaaattacactttaagatttgatgctggtgtagcaatgcagaagttttcagcttca
acactacaaaagacaaaaaggacagcagatgaggttcgctcaacggtagcggagctggaa
aatgctgttcgtgtttttagtcagttatctgctgcttccaacctccactttcatggcttt
gatgagaagaagattgatactcatgttggttattgtaagcacttactggaggctgcagga
gttcacctcaaagcggcagaacatgaagagcagcagatccgtcaaagacaagaacttgca
cgccaggttgcattggcagaggatgcccgtcgtaaggcagatgagcaaaggaaatttcaa
ttggagaggagaaaactggaagatgaggaaaaaaggatgatgcaacaggagcagcatttt
aaacgtgtgaaggagcaatggaagagcaccacacctgctaaacgaagagagaggtcagag
attgatgatgatgaagctggtaatagtgagaagaggagaaggaaaggaggaaagaggaga
aagaaggacaggaaggggaaatcgcattatgagacagaggaggccgacaatgatatgatg
gatgatcaagaactatacaatgaagacaataatataggttatagggagtcgaggagccaa
gtgaatgatcaggtcgatgattttgaagggaatgatcaggatgctcttgctgaagctggg
ctcgaagattctgacgctgaggatgaagcgggtgcaccttcgtccaatgctgccagacga
agagccacatggtcagattctgaagaggatgagcctatagatacacagcgagagtcaaga
cttcaaagagaaaactccgcaggacttgaggatagtgatggagaaatcagatga
DBGET
integrated database retrieval system
