KEGG   Cucumis melo (muskmelon): 103492411
Entry
103492411         CDS       T03195                                 
Name
(RefSeq) TATA-box-binding protein isoform X1
  KO
K03120  transcription initiation factor TFIID TATA-box-binding protein
Organism
cmo  Cucumis melo (muskmelon)
Pathway
cmo03022  Basal transcription factors
Brite
KEGG Orthology (KO) [BR:cmo00001]
 09120 Genetic Information Processing
  09121 Transcription
   03022 Basal transcription factors
    103492411
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:cmo03000]
    103492411
   03021 Transcription machinery [BR:cmo03021]
    103492411
Transcription factors [BR:cmo03000]
 Eukaryotic type
  beta-Scaffold factors with minor groove contacts
   TATA-binding proteins
    103492411
Transcription machinery [BR:cmo03021]
 Eukaryotic type
  RNA polymerase II system
   Basal transcription factors
    TFIID
     103492411
  RNA polymerase III system
    TFIIIB
     103492411
  RNA polymerase I system
    SL1/TIF-1B
     103492411
SSDB
Motif
Pfam: TBP DUF3378 DUF4295
Other DBs
NCBI-GeneID: 103492411
NCBI-ProteinID: XP_008450995
UniProt: A0A1S3BPX8
LinkDB
Position
2:2951136..2957736
AA seq 200 aa
MADQGLEGAQPVDLKKHPSGIVPTLQNIVSTVNLDCKLDLKAIALQARNAEYNPKRFAAV
IMRIREPKTTALIFASGKMVCTGAKSEQQSKLAARKYARIIQKLGFPAKFKDFKIQNIVG
SCDVKFPIRLEGLAYSHGAFSSYEPELFPGLIYRMKQPKIVLLIFVSGKIVLTGAKVREE
TYTAFENIYPVLTEFRKNQQ
NT seq 603 nt   +upstreamnt  +downstreamnt
atggcagatcaaggcttggaaggagcccaacctgttgatcttaaaaagcatccttctggg
attgtacctactcttcagaacattgtgtccacagttaatctggactgcaagttggatctg
aaggccattgctctacaagctcgcaatgctgaatataatcccaagcgttttgctgctgtt
atcatgagaataagggagccaaaaaccacagcattgatatttgcatcgggaaagatggtc
tgtactggagctaagagtgaacaacaatccaaattagctgcaagaaagtatgcccgtatt
atccaaaaacttggttttcctgctaagtttaaggattttaagattcagaatattgttggt
tcatgtgatgttaagttcccaataaggctcgagggtcttgcttattcacacggagccttt
tcaagttacgaaccagagttatttcctggattgatatatcggatgaaacaaccaaagatt
gttcttctcattttcgtctctggcaaaatagttctaactggggccaaggtgagagaggaa
acatatacggcttttgagaacatataccccgtgcttacagagttcaggaaaaaccagcaa
tga

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