Cucumis melo (muskmelon): 103492732
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Entry
103492732 CDS
T03195
Name
(RefSeq) protein TRANSPORT INHIBITOR RESPONSE 1
KO
K14485
transport inhibitor response 1
Organism
cmo
Cucumis melo (muskmelon)
Pathway
cmo04075
Plant hormone signal transduction
Brite
KEGG Orthology (KO) [BR:
cmo00001
]
09130 Environmental Information Processing
09132 Signal transduction
04075 Plant hormone signal transduction
103492732
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
cmo04121
]
103492732
Ubiquitin system [BR:
cmo04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Target recognizing subunit (F-box)
103492732
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Gene cluster
GFIT
Motif
Pfam:
Transp_inhibit
F-box_5
LRR_At5g56370
F-box-like
LRR_At1g61320_AtMIF1
F-box
LRR_NXF1-5
LRR_8
Motif
Other DBs
NCBI-GeneID:
103492732
NCBI-ProteinID:
XP_008451438
UniProt:
A0A1S3BRJ6
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Position
1:31936153..31939955
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AA seq
584 aa
AA seq
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MLRMASTFPEDVLEHVFSFIQCHKDRNSISMVCKSWYEIERCCRKRVFVGNCYAVSPQTV
IRRFPDVRSVELKGKPHFADFSLVPDGWGGYVYPWILAMASAYPLLEEIRLKRMVVTDES
LELISKSFKNFKVLVLMTCEGFSTDGLAAIAANCRNLKVLDLRESDVEDLNGHWLSHFPD
TYTSLVSLNIACLGSEVSVSALERLVDRCPNLRTLRLNRPVPLDRHANLLRRAPQLVEFG
AGCYMADLRSEVFSSLTGAFTSCTELKSLSGFWDVVPAYLPSVYPTCSRLTSLNLSYATI
QCDDLTKLISQCHNLQKLWVLDFIEDSGLEAVADTCKDLRELRVFPSEPYGQEPNVSLTE
QGLVSVSEGCPKLQSVLYFCRQMTNAALVTIARNRPNMTRFRLCILEPRTPDYLTDQPLD
VGFGAIVEYCKDLQRFSLSGLLTDRCFEYIGTYGKKLEMLSVAFAGDSDLGLHHVLSGCD
SLRKLEIRDCPFGDKALLANAAKLETMRSLWMSSCSVSFGACKLLAQKFPQLNVEVIDER
GPPNTRPESCPVERLYIYRSVAGRRLDMPGFVWTMDGDAPLKLT
NT seq
1755 nt
NT seq
+upstream
nt +downstream
nt
atgctgagaatggcgagtacgtttccagaagatgtgttggagcatgtgttttcgtttata
cagtgtcataaagacaggaactcgatttctatggtgtgtaaatcttggtatgagattgag
agatgttgtaggaagagggtttttgttgggaactgctatgcggtgagtcctcagactgta
atcaggcggtttccggatgtgagatctgtggagttgaaagggaagccgcactttgcggat
tttagtttggtgcctgatggttggggtgggtatgtttatccatggatcctggctatggct
tctgcgtatcctttgttggaggagatcaggttgaagagaatggtggttacggatgagagt
ttggagctcatttccaagtcttttaagaattttaaggttcttgtgttgatgacttgtgaa
gggttcagtactgatgggcttgcggccattgctgctaattgcaggaatttgaaagtattg
gacttacgagagagtgatgtggaagatctgaatgggcattggctcagccattttcctgat
acatatacgtcattggtatctctcaatattgcttgtttggggtctgaggtgagtgtatca
gcactggagcgtctagtggacaggtgtccaaacttaaggacactgcgtctcaatcgtcca
gttccccttgataggcatgccaacctacttcgtcgtgcccctcagctggttgagtttggt
gctggatgctatatggctgacttgagatctgaagttttttcgagcttaactggggcattt
acaagctgcacagaattgaagagtctgtcaggattttgggatgttgtccctgcatacctt
ccttctgtttatccaacatgctctcggctaacatccttaaacttaagctatgctacaatt
caatgtgacgatcttacaaagcttatcagtcaatgtcataatttacagaagctttgggtg
ctggacttcattgaggattctggccttgaagctgttgcagatacctgcaaagatcttaga
gaattaagagtgtttccatccgaaccgtatgggcaggaaccaaatgtgtctttgacagaa
cagggcctcgtctctgtatctgaaggttgcccaaagctccaatctgttctgtacttttgt
cgtcaaatgacaaatgctgccttagtgaccattgccaggaatcgtccaaacatgaccaga
tttcgtctatgtattctggagccacggactcccgattaccttacggatcagccacttgat
gtaggttttggggcaattgttgagtattgcaaagatctccagcgcttttccctttctggc
cttcttacggatcgatgtttcgaatatatagggacttatggtaaaaagctagagatgtta
tctgtggcatttgcaggcgatagtgatttaggtcttcatcatgtgttgtctggatgtgat
agtcttcgcaagctggagatcagggactgtccttttggtgataaagctcttttagccaat
gctgcaaagctcgagacaatgcgatccctttggatgtcttcttgctcagtgagttttgga
gcatgcaaattgttagctcagaagtttccccaactcaatgtcgaagttatagatgagagg
ggtcctccaaataccaggcccgaaagttgtcctgtggagaggttatatatataccgaagt
gtcgctgggcgtcggttagatatgcctggttttgtgtggacaatggacggagatgctcct
ctaaagcttacttga
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