Cucumis melo (muskmelon): 103492766
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Entry
103492766 CDS
T03195
Name
(RefSeq) BRCT domain-containing protein At4g02110 isoform X1
KO
K10728
topoisomerase (DNA) II binding protein 1
Organism
cmo
Cucumis melo (muskmelon)
Pathway
cmo03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
cmo00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
103492766
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
cmo03032
]
103492766
03400 DNA repair and recombination proteins [BR:
cmo03400
]
103492766
DNA replication proteins [BR:
cmo03032
]
Eukaryotic type
DNA Replication Initiation Factors
Other initiation factors
103492766
DNA repair and recombination proteins [BR:
cmo03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
BRCA1-B complex
103492766
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BRCT
PTCB-BRCT
BRCT_2
RTT107_BRCT_5
PHD
Motif
Other DBs
NCBI-GeneID:
103492766
NCBI-ProteinID:
XP_008451492
UniProt:
A0A1S3BRK5
LinkDB
All DBs
Position
1:33357681..33364740
Genome browser
AA seq
1376 aa
AA seq
DB search
MEIDYSCQPFSGVHFVLFGFNSVDEKQVRSKLIDGGGVDVGQYGPSCSHVIVDKNKIVYD
DPVCVAARNDGKLLVTGLWVDHRYDSGLLADATSVLYRPLRELNGIPGAKSLIMCLTGYQ
RQDRDDVMTMVGLIGAQFSKPLVANKVTHLICYKFEGDKYELAKRLRTIKLVNHRWLEDC
LREWMLLPESNYNMSGYDMEMLEAEAKDSEEESNSGITKQKHFARRNTKSPDNIKFGLHS
TSEISNTVPASKTLDGRTNFADTKSMLTVPTTNTEFIPSGKFDKHDAVREPICQEVDVFS
TPWDSMSFDMHATTSESLKQEVKNEVVTSPSNAARSPQLCATSYSRRTSLKSPLPLFSGE
RLERADASCKIATGEIKDTSGVDVSLEKMEQVTYATFSGHEQNSSRGTGLFGKGDSNARL
PLKSISDVSYDVPRSHSMSENTKSCTLNNPSADEKFLGLEMSRVSLNHDDSGKRCAKILQ
HSRASTDISSPIKKPFTCDLPFSNSVRSPTEYVAEGSLKTPRTPFQISGKDLSPDKPNEL
SHDCGISGDLVGKTKETNRQQNGVLAASESDSGTKATKTKSASPSSLSSSVIQNNDLHSK
PRRIKMFAKKSLGSRPKLGSGSHRGSILLNKTTSLNDSVSSSCGNGENLFSSSPQDVSIG
VKKVVETADKGDLSHKYEVMDEDDKTSDPENKEADFEHQMIDTENFMEVPHISDDDKVAK
QISAGVKCNNSASMLEDTIPSGPLQEMIERKAPLSIGNAQLDELRLEDEKSKMNVGDRGP
TEDKMLINSSKAKSKQGKVCKAPPRKKNGKTGKRPQLVAAGLNTEVHTIPDNISEKVNVP
CEAMDEDDKTSDLENKEADFEQQMIDTDKLNEVPLISDDHKLAKEIASGVKCNNSTRVLD
DTIPSGTLEEVLEPKATVSIENVQLDELSLEYEKSKLNVGDRGPTEEKMLKNSSKAKPKQ
GKVSKAPSRKKNEKTGKKPQLVAAGLNTEVHTIPDYKSEKENVPCDVGDKTSHIVEHCDK
ITVESNTKQRKVTKKSSEISANSSMEIEEVLREVKPEPVCFILSGHRLERKEFQKVIKHL
KGRVCRDSHQWSYQATHFIAPDPVRRTEKFFSAAASGRWILKSDYLTDSSQAGKLLNEEP
YEWYKKGLTEDGAINLEAPRKWRLLREKTGHGAFYGLRIIIYGECIAPPLDTLKRAVKAG
DGTILATSPPYTKFLESGVDFAVVGPGMPRADTWVQEFLNNEIPCVAADYLVEYVCKPGY
SLDKHVLYNTHAWAERSFSNLRSKAEEVAEDASSQDDCSDNDIACQECGSRDRGEVMLIC
GNEDGSSGCGIGMHTDCCNPPLLDIPEGDWFCSDCINSRNSNSSNKRKKGVSVKRK
NT seq
4131 nt
NT seq
+upstream
nt +downstream
nt
atggaaattgattattcctgccaaccgttctcaggtgttcacttcgttctctttggattc
aatagcgttgatgagaaacaggttcggtctaagctaattgatggcggaggggttgatgtt
ggtcagtatggcccgagctgctctcatgtgatcgtggacaagaataagattgtttatgac
gatccggtttgtgttgctgctcgaaatgatggcaagttgcttgtcacggggctatgggtt
gatcatagatatgattctgggttgcttgctgatgctacttcggtattgtaccgaccgtta
agggaactgaatggtatcccaggggctaaaagtttgatcatgtgcttgactgggtaccag
cgacaggatagagatgatgttatgacaatggttggcttgataggtgctcaattctctaag
ccattggtggcaaacaaggttacccacctcatatgttacaaatttgaaggggacaaatat
gagcttgctaaaagactaaggaccatcaagcttgtcaatcatcgttggctggaagactgc
ttgagagaatggatgctacttccagaatctaattacaacatgagtggatatgacatggag
atgcttgaagctgaggctaaggattctgaagaggaatctaacagcggcatcaccaaacaa
aaacattttgcaaggagaaacaccaagagtcctgacaacataaaatttggtttacattca
accagtgaaatatctaatacagtgccagcttcaaagacattggatgggcggacaaacttt
gctgatactaagagcatgttgacagttcccactaccaacactgaatttattccttctgga
aagtttgataagcacgatgcggtcagagaacctatttgtcaggaagttgatgtttttagt
actccttgggattccatgtcttttgacatgcatgcgacaacttctgaatctttgaagcag
gaggtgaaaaatgaggtagtgacaagtccatcaaatgcagcgaggtccccgcaactgtgt
gctaccagttactctaggagaacctcattgaagtcgccacttccactgttttctggagaa
agattggaaagagctgatgcctcttgtaaaattgcaacaggtgaaataaaagatactagt
ggtgttgatgtatctttagaaaagatggagcaagtaacttatgctactttctctggccat
gaacaaaattcttcgaggggaactggtttatttggtaaaggagattcaaatgctagattg
ccactgaaaagcatttcagatgtatcttatgacgtccctcgatctcattcgatgagtgag
aacacaaaatcttgcaccttgaataacccctctgcagatgaaaaatttttaggattggaa
atgagtcgtgtttctttaaaccatgatgattctggtaagcgttgtgctaagatcttgcag
catagtagggctagtactgacatctctagtcctattaagaaaccatttacatgtgaccta
cctttcagcaacagtgttcgctctccaactgaatatgttgctgaaggcagcttgaagact
cctcgaacccccttccagatatcaggaaaagacctgtcacctgacaagcccaacgagtta
agtcatgattgtggaatttctggagatttggttggaaaaactaaagaaacaaacaggcag
cagaatggtgttttggctgcatctgaaagtgatagtggtaccaaggctacaaaaacgaaa
tcagcctcgccaagtagtttgagttcttctgttattcaaaataatgacttgcattccaaa
ccacgaagaatcaagatgtttgccaaaaagagcttgggttcgagaccaaagttgggcagt
ggcagtcataggggttctattctcttgaataaaaccacttccttgaacgattcggtttct
tcatcttgcgggaatggtgaaaacctcttcagctcatcacctcaggatgtcagtattgga
gtgaaaaaggttgtggagactgcagataagggggacttatctcataaatatgaagtcatg
gatgaagatgacaaaacttctgatccagaaaataaagaagctgattttgagcatcaaatg
attgatacggaaaatttcatggaagttccacatataagtgatgatgataaggtagcaaag
cagatttcagctggagtgaaatgtaacaatagtgctagtatgcttgaggatacgattcct
tcaggtccactacaagaaatgattgaacgcaaagcacccctttccatcggaaatgcacag
ctggatgaattaagactagaagatgagaaatcaaaaatgaatgtgggggatagaggtcca
acagaggacaaaatgttgataaactcttctaaagcaaaatctaaacaaggcaaggtatgt
aaggcacctccgcgtaagaaaaatgggaagactgggaagagacctcaattggttgctgca
gggcttaatactgaagtccatacaatacccgataatatttcagagaaggtaaatgtacca
tgtgaagccatggatgaagatgacaaaacttctgatctagaaaataaagaagcagatttt
gagcagcaaatgatagatacagacaaattaaatgaagttccgctgataagtgatgatcat
aagctagcaaaagaaattgcatctggagtgaaatgtaacaatagcactagagtgcttgat
gatacaattccttcaggtacactggaagaagtgcttgaacccaaagcaacagtttccatc
gaaaatgtgcagctggatgaattaagtctggaatatgagaaatcaaaattgaatgtgggg
gatagaggtccaacggaggaaaagatgttgaaaaactcctctaaagcaaaacctaaacaa
ggtaaagtttctaaagctccttcccgtaagaaaaatgagaagactgggaagaaacctcag
ttggttgctgcagggcttaatactgaagtccatacaatacccgattataagtcagagaag
gagaacgtaccatgtgatgttggtgacaaaactagtcatattgtcgagcattgtgacaaa
attacagtcgagtctaatacaaagcaaagaaaggtcactaaaaaatcttctgagatcagt
gccaattcttccatggaaattgaggaagttttgagagaagtaaaacctgaacccgtgtgt
tttatcttgagtggacatcgtcttgaaaggaaggagtttcagaaagtaatcaagcatttg
aagggaagggtttgcagagactctcatcaatggtcatatcaggctacacatttcatagcc
cccgatccagtccgtagaactgaaaagtttttttcggctgcagcatctggaaggtggatt
ctcaaatctgattatctaacagatagtagtcaagctggaaaactcttgaatgaggagcct
tatgaatggtacaaaaaaggcctcactgaagacggtgcaatcaacttggaagctcctagg
aaatggcggctcttaagggagaaaacaggtcatggtgcgttctatggattgcgtattatc
atatatggggaatgcattgctccacctctggatactctcaagcgtgctgtgaaggctgga
gatggaacaatactagccacatctccaccttatactaaattcctcgagtctggagttgat
tttgctgtcgttggtcctggcatgccacgtgctgatacatgggtacaagagttcttaaac
aatgaaataccctgtgtagcggctgattacttggttgagtatgtgtgcaaacctggttat
tctctcgataaacatgttttgtacaatactcatgcatgggcggaaagatcttttagcaat
cttcggagtaaagcagaagaagttgctgaagacgctagctcacaggatgattgttctgat
aatgatatagcctgccaagagtgcggatcccgcgatagaggtgaagttatgctcatttgc
ggtaatgaagatggttctagtggttgtggaataggcatgcatacagattgctgcaatcct
ccattactggatattccagagggtgattggttttgttcagactgtattaacagtagaaac
agcaattcttcgaataaaaggaaaaagggagtctcagtcaagagaaagtga
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