Cucumis melo (muskmelon): 103492782
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Entry
103492782 CDS
T03195
Name
(RefSeq) syntaxin-42 isoform X1
KO
K08489
syntaxin 16
Organism
cmo
Cucumis melo (muskmelon)
Pathway
cmo04130
SNARE interactions in vesicular transport
Brite
KEGG Orthology (KO) [BR:
cmo00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04130 SNARE interactions in vesicular transport
103492782
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cmo04131
]
103492782
Membrane trafficking [BR:
cmo04131
]
SNARE
Syntaxin (Qa)
Stx-TGN / EE
103492782
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GFIT
Motif
Pfam:
SNARE
Prominin
EF-G-binding_N
ZSWIM1-3_C
MCPsignal
Syntaxin_2
DGKD_4H
GlutR_dimer
Motif
Other DBs
NCBI-GeneID:
103492782
NCBI-ProteinID:
XP_008451520
UniProt:
A0A1S3BSG2
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Position
1:33225019..33229147
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AA seq
320 aa
AA seq
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MATRNRTAQFRRHRDAVKSVRAPLSSSAAGSSGPVIEMVSSSLLRSKRSSSYAPLSTEDP
GPSSSDAFMVGLPPAWVDDSEEITVNIQKIRRKMAELVKAHSKALMPSFADGKEDEHTIE
ALTLEITNLLKTSEKRLKKISSTGSSEDINIRKNVQRSLATELQNLSMDLRRRQSMYLKH
LQQQKEGHDGIDLEINLNGNRTFQEDDGYDEFGTNENQTMTLDGQHIQGREKEIKQVVKS
VNELAQIMKDLSTLVIDQGTIVDRIDHNIQNVAVSVEEGLKQLQKAEKTQKNGGMVKCAT
VLVIMCFIMLVLLILKEIIM
NT seq
963 nt
NT seq
+upstream
nt +downstream
nt
atggcgacgaggaatcgaactgcacagtttagaaggcacagggatgccgtgaagagtgtc
cgtgcgcctctatcctcttcggcagctggctccagtggaccggttattgagatggtcagt
tcgtctcttcttcgttcgaagcgctcttcttcatatgctcccctcagcactgaagatcca
ggaccttcgagcagcgatgcatttatggttggtctacctccagcttgggtggatgattct
gaagaaataactgttaatatacagaaaattcgtaggaagatggcagagctagtcaaggct
cattccaaagctttaatgccttcttttgctgatggcaaagaagacgagcatacgattgaa
gcacttacgctagagattaccaatcttttgaaaacctccgagaagaggttaaagaaaatt
tctagtactgggtcttccgaggatattaacatcagaaaaaacgtccagcgttctcttgct
acagagcttcagaatctttcgatggatcttcgtagaagacaatcaatgtatttgaaacat
ctgcaacagcaaaaggagggacatgatggaattgatttggagataaatttgaatggaaac
cgaactttccaggaggatgacggatatgatgaatttggaacaaatgaaaaccaaacgatg
acattagatgggcagcacattcagggaagggagaaagagattaaacaggttgtaaaatcc
gtaaatgagcttgcccaaattatgaaggatctctcaactcttgtcatagaccagggtacc
attgtcgatagaattgaccacaatattcagaatgttgctgtttcagttgaagagggcttg
aaacaacttcaaaaggcagagaagacacagaaaaatggaggaatggtgaaatgtgcaaca
gtgcttgttattatgtgtttcataatgctggttcttttgatactaaaggagataattatg
taa
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