Cucumis melo (muskmelon): 103492825
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Entry
103492825 CDS
T03195
Name
(RefSeq) DNA mismatch repair protein PMS1 isoform X1
KO
K10858
DNA mismatch repair protein PMS2
Organism
cmo
Cucumis melo (muskmelon)
Pathway
cmo03430
Mismatch repair
cmo03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
cmo00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
103492825
03460 Fanconi anemia pathway
103492825
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cmo03400
]
103492825
DNA repair and recombination proteins [BR:
cmo03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
MutL homologs
103492825
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
DNA_mis_repair
MutL_C
HATPase_c_3
HATPase_c
Motif
Other DBs
NCBI-GeneID:
103492825
NCBI-ProteinID:
XP_008451591
UniProt:
A0A1S3BSM9
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Position
1:32754377..32761045
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AA seq
921 aa
AA seq
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MEVGNAVDSPTIKPINKGIVHRICAGQVILDLSSAVKELVENSLDAGATSIEISLKDYGE
EWFQVIDNGSGISPTNFRVLALKHHTSKLSDFPDLQSLTTYGFRGEALSSLCSLGTLTVE
TKTKNESVATHLTFDHSGLLVAEKKTARQVGTTVMVKKLFSNLPVRSKEFSRNIRKEYGK
LISLLNAYAVIARGVRFLCTNSAGKNAKSVVFKTQGSGSIKDNIITVFGMNTFNCLESVS
ILLSDDCKVEGFVSKSGQGSGRNMGDRQFFFVNNRPVDMPKVSKLVNELYKGANSRQYPI
AILNFTLPSKACDVNVTPDKRKIFFSDETHILQTLREELLKIYSPTNACYSVNKVEEPTV
QVDSLELCSDNGKLCMSLEHFSSDGGDLRDASSHQPLADDDDSFNKIKEVEQSSHSTEVL
NSDVEENVTRKDFALRMHGTKKADALLNDHDQHKRTYLSNKKDVHVTPSSPFLCVTGTDT
SRVQSSLDKFVTINKRKIETSSAPLSEVPVLRNQFLNNQRKKSCPDITSKDIKCTNGNCR
VFDDFSVGNDEDSSIQIKTDRVFSKVGLPPSSADHSDDGEATEEDTGEAIAKVHSSVIES
TASPTKDLEIISEDLPLPVCSIQPSGLLKESSSPQLKLCSTFHFDFHELKKRRIQRQLRY
KLNGYTCERKKLKCHYAAATVKLSQPDNEDRKARALEAAARELDKLFRKKDFGRMKVIGQ
FNLGFIIGKLDQDLFIVDQHAADEKYNFERLSQSTILNQQPLLRPLGLELSAEEEVVVSI
HMDVFRKNGFTIEEDPHALPGNRFRLKAVPFSKNITFGVEDVKDLISTLADSEGECSIIG
CYRMDTADSVCPSRVRAMLASRACRSSVMIGDPLGRNEMQKILEHLAELKSPWNCPHGRP
TMRHLVDLTTVKRSEEQEADC
NT seq
2766 nt
NT seq
+upstream
nt +downstream
nt
atggaggtcggaaatgccgtcgattcccctactattaagcccattaacaaaggtatcgtc
caccgaatttgcgctggccaagtgattcttgacctttcttccgccgtcaaggagttagtg
gagaacagcttggacgccggagccactagcatcgagatttccttgaaagattacggagaa
gaatggttccaggtcatcgataatgggtccggcatttctcccaccaatttcagggttctt
gctcttaagcatcatacgtcgaaattatcagattttcctgatcttcaatctttaactacc
tatggtttcagaggagaggcattgagttctctttgttctcttgggactttgaccgttgaa
actaagacaaagaatgagtctgttgcaacccacttaacttttgatcattcaggactacta
gttgctgagaagaaaactgcacgccaagttggaaccactgtcatggttaagaagttattc
tccaatttacctgtgcgcagcaaagagttcagccgtaatattcgaaaggaatatggcaag
ctcatttcattattgaatgcctatgctgtcatagcaagaggagttagatttttatgcact
aattctgctggaaaaaatgcgaagtctgtggtattcaaaactcagggaagtggttccatt
aaggacaacatcataacagtatttggtatgaataccttcaactgcttggagtctgtatct
atattattatcagatgattgcaaagttgaaggatttgtatcaaagagtggacagggaagt
gggaggaatatgggagatcgacaattctttttcgtaaataatcgacctgtggatatgcct
aaagtgagcaaacttgtaaatgagttatataaaggtgcaaactcccggcaatatccaatt
gcaatattgaatttcactcttccaagtaaagcttgtgatgtcaacgtaactcccgataag
agaaaaatatttttctctgatgaaactcacattttgcaaacattgagagaggaattactg
aagatctattctccaactaatgcctgttattctgtgaacaaagttgaagaacctactgta
caagttgatagccttgagctgtgttctgataatgggaaattgtgtatgtcattggaacat
ttctcatctgatgggggtgatctcagagatgcttcttctcatcagcctttggctgatgat
gatgattctttcaataaaattaaagaggtggaacaatcctcacattctactgaggtgtta
aatagtgatgttgaggaaaatgtaaccagaaaggactttgctcttagaatgcatggcacg
aaaaaggctgatgctcttttaaatgatcatgatcagcataagagaacttatctcagtaac
aagaaagatgtacacgttactccttcctctccatttttgtgtgttactggaacagataca
agccgtgttcaatcttcacttgacaagtttgtaactataaacaagagaaaaattgaaact
tcgtctgcaccactgtctgaagtgcccgttttaagaaaccaatttcttaataatcaacgg
aagaaaagctgtcccgatatcacttccaaggatataaaatgcactaatggaaactgccgt
gtgtttgatgatttttcagtcgggaatgatgaagacagctcaattcaaattaaaacagat
agagtcttcagtaaagttggtcttccaccatcctctgcagaccatagtgatgatggagaa
gcaacagaggaagatacaggggaagccatagccaaggtgcattcttctgtgatagaatct
actgcttcacccaccaaggatcttgagattatttctgaggatctcccactgcccgtctgc
tcaatacaaccttctggtttgctgaaagaaagctccagtcctcaattgaagttatgttca
acgtttcattttgactttcatgagttgaagaaaagaaggattcagaggcagttgagatac
aaattgaatggatatacatgtgaacgaaagaagttgaaatgccactatgctgctgctact
gtgaagctttcccaacctgataatgaagacaggaaagcaagagctttagaagcagctgct
agggaattggacaagcttttcagaaagaaggattttggtagaatgaaggtgattggacaa
ttcaaccttggatttatcattgggaagttagatcaagatctatttattgttgatcagcat
gcagctgatgagaagtacaattttgagcgactgtcacaatcgacaattttgaaccaacag
cctttactgcggccgttggggttggaactatctgctgaagaagaagttgtcgtttcgatt
cacatggatgtattcaggaaaaatggatttactatagaggaagatccacatgctctacct
ggcaatcgattcagattaaaagctgtcccttttagtaaaaacataacatttggagttgaa
gatgtaaaggacctgatttctacacttgccgatagtgaaggtgagtgttccataattggc
tgttatcggatggacactgctgattcagtctgcccttcccgagttcgagcaatgctggca
tctcgggcatgtagatcttctgttatgattggtgatccactaggaagaaatgaaatgcag
aagatattggagcatttggcagagctgaaatctccttggaactgccctcatggaaggcca
accatgagacacttggtggatcttacaacagttaaaaggtcagaagaacaggaggctgac
tgttga
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