Cucumis melo (muskmelon): 103492842
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Entry
103492842 CDS
T03195
Name
(RefSeq) autophagy-related protein 18a
KO
K22991
WD repeat-containing protein 45
Organism
cmo
Cucumis melo (muskmelon)
Brite
KEGG Orthology (KO) [BR:
cmo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cmo04131
]
103492842
Membrane trafficking [BR:
cmo04131
]
Autophagy
Other autophagy associated proteins
Others
103492842
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PROPPIN
Beta-prop_THOC3
BCAS3_WD40
Beta-prop_IFT122_1st
Beta-prop_WDR5
WD40
WD40_Prp19
WD40_CDC20-Fz
Beta-prop_EML_2
Beta-prop_WDR3_1st
WD40_WDHD1_1st
Beta-prop_WDR36-Utp21_1st
Beta-prop_WDR36-Utp21_2nd
Beta-prop_WDR90_POC16_2nd
ANAPC4_WD40
Beta-prop_WDR3_2nd
CFAP251_N
Beta-prop_RSE1_2nd
Beta-prop_Vps41
Beta-prop_IFT140_2nd
Beta-prop_EML
WDR55
Beta-prop_WDR19_1st
Beta-prop_HPS5
Nucleoporin_N
Beta-prop_TEP1_2nd
PEP5_VPS11_N
WD40_Gbeta
Izumo-Ig
Beta-prop_IFT80_2nd
Motif
Other DBs
NCBI-GeneID:
103492842
NCBI-ProteinID:
XP_008451609
UniProt:
A0A1S3BRA9
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Position
1:32480803..32483351
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AA seq
410 aa
AA seq
DB search
METLSAFPSPPWPNPNPNPNPNPPSAVADSSSSERFDSDSVSSVDPTGLSPAVEPPASQP
SLLHLSFNQDHGCFAAGTDRGFRIYNCDPFREIFRRDFDRGGGVGVVEMLFRCNILALVG
GGPDPQYPPNKVMIWDDHQSRCIGELSFRSAVRGVRLQRDRIIVILEQKVFVYNFADLKL
LHQIETIANPKGLCAVSQLSTSLVLVCPGLQKGQVRVEHYASRRTKFIMAHDSRIACFAL
TTNGQLLATASTKGTLVRIFNTFDGNLLQEVRRGADRAEIYSLAFSSTAQWLAVSSDKGT
VHVFSLKVNSGSLGNDMTHQNDSSLSVAPSGSSFSFIKGVLPKYFKSEWSVAQFRLHEGS
QYVVAFGHQKNTVVILGMDGSFYRCQFDSVNGGEMTQLEYHNFLMPEEAF
NT seq
1233 nt
NT seq
+upstream
nt +downstream
nt
atggaaaccctctccgctttcccttcccctccatggcccaatcccaatcccaatcccaat
cctaaccctccctccgccgtcgccgactcctcctcctccgaacgcttcgattccgattcc
gtttcatcggtggacccgacgggtttgtccccggcggttgaacctcctgcttcgcagcct
tctctgctacatctctccttcaatcaagatcatggctgctttgccgccgggactgaccgt
gggtttcggatctacaattgcgatcccttcagagagattttccggagggattttgaccgt
ggaggtggtgttggtgttgttgagatgctttttcgatgtaatattttggctcttgttggt
ggtggacccgaccctcagtatccgcctaataaggttatgatttgggatgatcatcagagc
cggtgtattggggagctttcgtttaggtctgctgttcgtggtgttcgtttacagagagac
aggattattgttattttggaacagaaggtttttgtttacaattttgcggatttgaagttg
ctgcatcagattgaaactattgccaaccctaagggtctttgtgctgtttcccagttgagt
acttcgcttgttcttgtttgccctggattacagaaggggcaggttagggttgagcattat
gcctctcgacggactaagtttattatggctcatgactcgaggattgcttgctttgcactt
acgaccaatgggcagttgcttgctacagctagtaccaagggaactttggttcggatattc
aacacatttgatggaaatttacttcaagaggtaaggagaggggcagatagagcagagata
tacagtttggctttctcatcgactgctcaatggctggcagtctccagtgacaagggcacc
gttcatgtgttcagccttaaagtcaattctggatctcttgggaatgatatgactcatcag
aacgattcttctctttctgtggcaccatccggttcctcattttccttcatcaaaggtgtc
ttgccaaaatatttcaagtcggagtggtcagtcgctcagtttcgcttgcatgaaggctct
cagtatgtcgttgcttttggtcaccagaagaatacggttgtaatccttggaatggatgga
agcttctaccgatgccaatttgattcggtgaatggaggagagatgacccagcttgaatat
cacaactttctaatgccggaggaagccttctag
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