Cucumis melo (muskmelon): 103492901
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Entry
103492901 CDS
T03195
Name
(RefSeq) sister chromatid cohesion protein SCC2 isoform X1
KO
K06672
cohesin loading factor subunit SCC2
Organism
cmo
Cucumis melo (muskmelon)
Brite
KEGG Orthology (KO) [BR:
cmo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
cmo03036
]
103492901
Chromosome and associated proteins [BR:
cmo03036
]
Eukaryotic type
Sister chromatid cohesion proteins
Adherin complex
103492901
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nipped-B_C
Cohesin_HEAT
PHD
PDS5
PHD_2
zf-RING_2
zf-RING_16
Motif
Other DBs
NCBI-GeneID:
103492901
NCBI-ProteinID:
XP_008451668
UniProt:
A0A1S3BS09
LinkDB
All DBs
Position
7:21081405..21103505
Genome browser
AA seq
1823 aa
AA seq
DB search
MSLPPSAFASASSSASTSSNRGIGLSNTIHSEVAPCLPLPSLPVFFGASDPHLRLFDHPD
ATYATSTADLLPHSKKIADLLLATDVSYLNLREDAQVLQEGSVEPFELYEEVLRHDGDAF
SYTAPGPIMEHVSSSTVPDRKVFEQRLHIRNQVEGDSRTTQSQKMEPETMPTNDTPISSS
RKVKTKKKVRDETSSGRTGSSELQDNTLAKSCEFLEDFCGRAEIVDDDRDESEWLALPLT
DLRMLVNEIMSIRSKKLLHLVPLDKLTRLLKVLDNQIHRAEGLSVEECEHSDSDAVATIF
CALESIHASLAIMAHDQMPKLLYKEEIIERILEFSRRHIMDIMCAYDPSYRALHKVSENG
VFEVNEDEEDGGYGSSTKKRRAVKTTKIRKPALNKVSNAVNTILQKMCTILGLLKDLLLI
ERLPDSCILQLVKTSFSTFLVDNIQLLQLKAIGLICGIFYSYTQHRNYLIDELVQMLFKL
PSTKRALRAYHLPEEEQRQIQMITALLIQLVHYSANLPEALRQASDSHSIFEVSVDSSCP
TKCHEAATEACCLFWTHVLQRFANVKTQDASEVKVMMENMVLDLLTTLNLPEYPASAPIL
EVLCVLLLQNAGLKSKDISARSMAIDFLGMIAARLKRDAVICATDKFWILQELGNKEDVG
DQSYPKDVCSICLDGRVEKYILVCQGCQRLFHADCMGGTGRENEIPNRGWYCQICHCRKQ
LQVLQSYCKSQCKNDSEKRKDWSDKGSNALWLVSNIEIVQQLLLNYLQEVGSTDDFHLFV
RWFYLCLWYKDDPKSEQKFIYYLSRLKSMAIVRDGGNTSSLLTRDSVKKITLALGQNNSF
SRGFDKILHMLLASLRENSPVIRAKALRAVSIIVEADPEVLGDERVQLAVEGRFCDSAIS
VREAALELVGRHIASHPDLGFKYFEKISERIKDTGVSVRKRAIKIIRDMCTSNANFSEFT
RACIEIISRVGDDESSIQDLVCKTFYEFWFEEPSCSQTQFFGDDSSVPLEIANKTEQIVE
ILRKMPNHQLLVTIIKRNLALDFLPQSTKAVGINPVSLTSVRKRCELMCKCLLERILQKV
TSQVEERSNMDTEVRALPYVLVLHAFCVVDPMLCAPASNPSQFVVTLQPYLKSQVDNRVV
AQLLESIIFIIDAVLPLLRKLSPNVAEDLEQDLKHMIVRHSFLTVVHACIKCLCSLSKIA
GKGAWVVEYLIQMFFKRLDSQGIDNKQLVGRSLFCLGLLIRYGSPLLSNSSNKNVDITKS
LSLLKMYLQTEDLVIRVRALQALGFVLIARPEFMLQEGVGKIIEESLSSGSDVRLKMQAL
QNMYDYLLDAEGQMGTDEAGDGAGPDTVESGQSVPVAAGAGDTNICGGIVQLYWERILGR
SLDLNGQVRQIALKIVEVVLRQGLVHPITCVPYLIALETDPHEANAKLAHHLLMNMNEKY
PTFFESRLGDGLQMSFIFIQTISRGSDNANKKIQSKGSSNLKSRSDSSSLTQARLGVSRI
YKLIRANRVSRNNFISSIVRKFDNPRMNDSMIPFLMYCAEILALLPFTFPDEPLYLIYAI
NRIIQVRGGALQEEIKALSVHLLQRNTQNVTYENGMIQPPQPGLFSDNIVLSDMNGSVEL
DQPRPFCNFTLMDLNQQIPPESAAHHELNNNNSTLEGKLHNISSMDSFSISKDDLQKIQT
MSLSSIALQLLLKLKRHLKIVYCLNDARCQSFNPNEPPKPGEFLSKQNVPYDISETCTTL
PTSYQEFMQRYQDFKNTLRDDAFDYSTYTANIKRKRPTVRKGRKSTIGGDDDDNDDDEDW
SGGKRLSNSGRKSSYSMRGSRQR
NT seq
5472 nt
NT seq
+upstream
nt +downstream
nt
atgagtttgccgccctctgcttttgcttctgcttcttcctctgcctctacctcctccaac
cgcggcatcggcttgtctaatactatacactctgaagttgctccttgcttgcctttgcca
tcacttccggtcttctttggcgcctctgaccctcaccttcgcctcttcgatcaccccgac
gctacctatgctacttccaccgctgatcttctccctcactctaagaagatcgctgatctg
cttcttgctactgatgtctcttacttaaatctcagagaagatgctcaggttcttcaagaa
gggtctgtggagccttttgaactctatgaggaagttctacgtcatgatggtgatgccttc
agttatactgctccaggtcctattatggagcatgtctccagcagtacagtacctgatagg
aaagtttttgagcaaagactacatattagaaatcaagttgaaggagactctagaacaact
caaagtcaaaagatggaacctgaaactatgcctactaatgatacgccaatctcatcttct
agaaaagtaaaaactaagaagaaagtccgagatgaaacttcttctggtagaactggctct
tctgagcttcaagacaacacccttgcaaaatcttgtgagttcttagaggacttttgtggt
agagctgaaattgtcgatgatgatcgtgatgaatcagagtggctggctcttcctcttact
gatcttcgaatgcttgtcaatgaaataatgtccatacgttcgaagaaacttcttcatttg
gttcctctagataagctgacgaggctgttgaaggttttagataatcagattcatagagca
gaaggattgtctgttgaagaatgtgaacattcagattcagatgcggttgcaaccatcttt
tgtgctttggagtccatacatgcatctctggcaataatggctcacgaccaaatgccaaag
ttgctttacaaagaagagatcattgagagaattctagagttctcccgacgtcacataatg
gatattatgtgtgcttatgatccttcttatcgtgcattgcataaagtcagtgaaaatggt
gtgtttgaagtcaatgaagatgaagaagatggtggctatggttcatcgactaagaaacgt
cgtgctgttaagactactaaaattaggaagcctgcactcaacaaggtatctaatgctgtt
aatactattcttcagaagatgtgcaccattctcggtttacttaaggatttgttgttaata
gagaggttaccagatagctgtattcttcaattagtgaaaacaagcttttctacttttttg
gtggacaatattcagctcctgcaacttaaggcaattggtttaatttgtgggatattttat
tcatatacacaacatcgtaactatttgatagatgaattagttcagatgctcttcaaattg
ccatccacgaaacgagctttaagggcgtatcatctaccagaagaagaacaacgtcaaatt
caaatgattactgccttgttgattcagttagtacattatagtgcaaacctccctgaagct
ttgaggcaagcatcagatagtcattccatctttgaagtttcagttgacagtagttgccca
accaaatgccatgaagcagctacagaggcatgctgtcttttctggactcatgtacttcag
cggtttgctaatgtgaagactcaagatgcatctgaagtgaaagtaatgatggaaaatatg
gttttggatctactcacaacattaaatttacctgaatatcctgcatcagctcctattttg
gaggttctttgtgtgttattacttcaaaatgccggactgaaatctaaagacatctctgct
cgttctatggccattgattttcttggcatgattgctgcaaggttgaaacgtgatgcagtc
atttgtgccacagacaagttttggatattgcaagagttgggaaataaagaggatgttggt
gatcagagttaccctaaagatgtctgttctatttgcttggatggcagggtcgaaaagtat
atccttgtctgtcaaggttgtcagaggttatttcatgcagattgcatgggaggaactgga
agggaaaatgaaattcctaatcggggctggtactgccaaatttgtcattgcagaaaacaa
cttcaagtcttacaatcatattgcaaatcccagtgcaagaatgatagtgagaagcggaaa
gattggtcagataaaggttccaatgctttgtggcttgtttcaaacattgaaattgttcag
cagttgcttctgaattacctccaggaagttggttccacagatgattttcatctatttgtt
cgctggttctatctctgcctgtggtacaaagatgatccaaaatctgagcagaaatttatt
tactatctctctagactgaaatctatggcaatagtgagggatggcggcaatacttcctcc
ttattgactagggattcagttaagaaaattactctcgcactaggacaaaataattctttc
tctagaggttttgataagattcttcacatgcttctggcaagtttaagggaaaattctcca
gtaattagggccaaggctttacgagcggtcagtataattgttgaagctgatccagaggta
ttgggagacgaacgtgtgcaactggctgtggaaggaaggttttgtgattctgcgatatct
gtcagggaagcagctttggaacttgttggcagacatattgcctcacatcctgatcttggt
tttaagtattttgaaaagatttctgagagaatcaaagataccggagttagtgtgaggaaa
cgagccatcaaaatcattcgagatatgtgcacttcaaatgcaaatttctcagagtttact
agggcatgcatagagatcatttctcgagttggtgatgatgagtcaagtattcaggatctt
gtttgcaagacattctatgagttctggtttgaggagccttcctgttcacaaactcagttc
tttggtgatgatagctcagttccattagagatagccaataaaactgagcaaattgttgaa
atattgaggaaaatgccaaatcatcaacttcttgtgactattattaagagaaacttagcc
ctcgattttttaccacaatcaactaaggctgttggtatcaaccctgtttccctcacatca
gttcgcaagcgatgcgagttgatgtgtaagtgcttactggaaaggatattgcagaaagtt
acctctcaggtggaggagcgaagtaacatggacacagaagtgcgggcacttccatatgta
ttggtcttgcacgccttttgtgttgtggatccaatgctctgtgcacctgcatccaaccca
tcccagtttgtggtcactctccaaccttacctcaagagccaggttgataatcgagtggtt
gcccagttactcgagagtatcatattcataattgatgcagtcttgcccttgcttcgaaaa
ttatctccaaatgttgctgaagatctagaacaagacttgaaacacatgattgttaggcac
tccttcttgacagttgtacatgcttgcatcaagtgtctttgctctttaagtaagatagca
ggtaaaggtgcatgggtcgtggagtatcttattcagatgttttttaaacgtttggattct
caagggatcgataacaaacagctagtaggacgctcactcttctgtcttggattacttatt
cgttatggtagtcctttgttgagcaattctagcaataagaatgttgatattacaaagagc
ctcagcttgttaaagatgtacctgcagacggaggatttggttattagggttagagcgctg
caggctttgggatttgttcttattgcgaggcctgaatttatgcttcaagaaggtgttggg
aaaattatagaggaatcattgtcatctggttctgatgttcgtcttaagatgcaagcattg
caaaatatgtatgattaccttcttgacgcggaaggtcaaatgggaacagatgaagctggt
gatggagctggccctgacactgtggagagtggccaaagtgtacctgttgctgctggtgcc
ggagataccaacatttgtggtggtattgttcagttgtattgggaaaggattctgggacga
agcttagatttaaatggccaagttcgtcaaattgccctcaagatcgtggaagtggtgctt
cgccaaggtcttgtccatccaattacttgtgttccgtatcttatcgcgcttgaaacagac
ccccatgaggcaaatgcaaagctggctcaccacttattgatgaatatgaatgagaagtac
ccaacattttttgagagccgcctgggggatggtcttcaaatgtcattcattttcattcaa
actatcagccgtggttctgacaatgcaaataaaaaaattcaatccaagggctctagcaat
ttgaaaagtagatctgacagtagttcattgactcaagcaagacttggagtttctcgaatt
tacaagctcatacgggccaaccgtgtttcaaggaacaattttatatcttccattgtgcga
aagtttgacaacccacggatgaacgactctatgatacctttccttatgtactgtgcagaa
atacttgcattgttaccatttacattccccgatgagcccttatatttgatttatgctatt
aatcgaataatacaagtaagaggaggagcacttcaagaagagatcaaagcattgagtgtt
catttgttacaacggaatacccagaatgttacatacgaaaatggaatgattcagcctcca
caacctgggttattttctgataatatagttttatcagatatgaatgggtcagtggagctt
gatcaacctcgtcctttttgcaatttcacgttgatggatctgaatcagcaaatcccacca
gagtcagctgcccatcatgaattgaataataataattctacattggagggaaaactccat
aacatttcctctatggattcgtttagtatctcaaaagacgatcttcagaagattcagacc
atgagcctgtcatctattgcactgcagcttcttctgaagctaaagagacatctaaaaatc
gtgtactgcctgaacgatgctcgatgccagtctttcaatccaaatgaaccaccgaaacct
ggagagtttctgtccaagcagaatgttccttacgacatcagcgaaacatgcacaactttg
ccaacgtcttatcaagaattcatgcaacgatatcaggatttcaagaatacgcttagggat
gatgcattcgattactccacttacactgcaaacattaaaaggaagcgtcctactgtaaga
aaaggacggaagtctacaattggtggtgatgatgatgacaatgacgatgatgaggattgg
agtggaggcaagagattgagcaacagtgggaggaaaagtagctatagcatgagagggagt
aggcaacgatga
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integrated database retrieval system
