KEGG   Cucumis melo (muskmelon): 103493011
Entry
103493011         CDS       T03195                                 
Name
(RefSeq) protein PAT1 homolog 2-like
  KO
K12617  DNA topoisomerase 2-associated protein PAT1
Organism
cmo  Cucumis melo (muskmelon)
Pathway
cmo03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:cmo00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    103493011
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:cmo03019]
    103493011
Messenger RNA biogenesis [BR:cmo03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    P-body specific factors
     103493011
  mRNA degradation factors
   5'-3' decay
    Decapping complex
     103493011
SSDB
Motif
Pfam: TFIIA
Other DBs
NCBI-GeneID: 103493011
NCBI-ProteinID: XP_008451848
UniProt: A0A1S3BSF1
LinkDB
Position
7:complement(23276759..23286861)
AA seq 808 aa
MEQSDVNDLRDSAENSSANSLFDASRYEFFGQNVVGEVELGGLEEDEDVPLFGSTDEEYR
LFVREESAGLGSLSEMDDLASTFAKLNKVVTGPRHPGVIGDRGSGSFSRESSSATDWAQD
GDFCNWLEQHVFDPECAQEEKRWSSQPQSSVRLPDPKPLYRTSSYPQQQPTQHHFSSEPI
IVPKSSFTSFPPPGSRSQHGSPRHLKNIQSLADGSQLPFSAPNITSLSKSNLQLAGMHHG
LHYGGNMHQYTTPGLSFSSRPQNQWINNAGLLHGDHSNLFNSILQQQLSHQNGLLSPQLL
SAHQQLQQHRMHHPVQPSLAHFAALQSQLYNAHSPSSHRAMLGLSDVREQKPKSQRGKHN
MRSSQQGSETGSQKSDSGSIQFRSKHMTADEIESILKMQHAATHSNDPYIDDYYHQARVA
KKAAGSRLKNAFCPSRLRELPSRSRSGSDQHSHSAPDSLGKIPLASIRRPRPLLEVDPPL
SGSCDGGSEQTISERPLEQEPMLAARITIEDGLCLLLDIDDIDRLLQHNKPQDGGVQLRR
RRQMLLEGLAASLQLVDPLGKSSHGVGPSPKDDIVFLRLVSLPKGRKLLSKLLKLLFPGS
ELARIVCMAIFRHLRFLFGGLPSDPGAAETTSNLSKTVSTCVNGMDLRALSACLVAVVCS
SEQPPLRPLGSSAGDGASIVLKSILERATELLTDPHAASNCSMPNRALWQASFDEFFSLL
TKYCVSKYETIVQSLFSQTPSSTDVIGSEAARAISREMPVELLRASLPHTNEPQRKLLMD
FAQRSMPVSGFSAHGGSSGQMNSESVRG
NT seq 2427 nt   +upstreamnt  +downstreamnt
atggaacaatctgatgtcaacgatttgagggactctgcggagaattcctctgccaattca
ctctttgatgcttcacgatatgagttttttggtcaaaatgtcgtgggagaagtggagctg
ggtggtttagaagaagatgaagatgtccctttatttggatctacagatgaagagtatcgt
ttgtttgttcgggaagagagcgcagggttgggatctttatcggaaatggatgatttggca
agtacttttgcaaagttgaacaaagttgttactggaccaagacatccaggagtcattgga
gatcgaggatctggttctttttctcgagaaagttcatctgcaactgattgggcacaagat
ggagacttttgtaattggttagagcagcatgtatttgacccagaatgtgctcaggaggag
aagagatggtcatcccaacctcaatcttctgttcgtcttccagatccgaaacctttgtat
agaacatcctcttaccctcagcagcaacctacacaacaccacttctctagtgaaccaatt
atagtaccaaaatcttctttcacatcctttcctcctccaggaagtaggtcccaacatggt
tcacctcgtcacttaaaaaatattcaatctcttgcggatggaagtcagttacctttctct
gcaccaaatatcacttctttatccaagtctaatttgcagttggctggtatgcatcatggc
ttgcattatgggggcaacatgcaccagtacaccactcccggcctttcttttagtagcagg
ccacaaaatcagtggattaacaacgctggtctattacatggggaccactcaaatctcttc
aacagtatattgcaacagcaactatctcatcaaaatggccttctgtcccctcagttactg
tcagctcatcagcagctgcaacaacacaggatgcaccatccagttcaaccttctttggcg
cattttgcagctcttcagtctcagctttataatgcccattcaccatcctcgcacagagca
atgcttggattgtctgatgtgagggagcagaaacccaagtcccagagagggaagcataac
atgcgttcttctcagcaaggttctgaaaccggtagtcaaaagagtgatagtggatccatc
cagttcagatctaagcatatgacagctgatgagattgagagtatcctgaagatgcagcat
gctgccacccacagtaatgatccatacatagatgactactatcaccaggctcgtgttgcc
aaaaaagctgctggttcaagattaaaaaatgcattttgtccgtctcgattaagagaactt
ccatctcgatctcgtagtggttcagatcagcattctcattctgcacctgattcattggga
aaaataccccttgcttctattcgtagacctcggcccctacttgaagttgatcctccgttg
tcaggttcatgtgatggtggttctgaacagacaatatctgagaggcctctggagcaggaa
ccgatgcttgctgctagaatcaccattgaagatggtctctgtcttctccttgatatagat
gatattgataggcttttacaacataataaaccacaagatggtggagtccagcttagacga
aggcggcagatgttgctggaaggtttggcagcatcacttcagcttgttgatccacttgga
aaaagtagccatggcgttggcccatctccaaaagatgatatcgtgttcttgcgtttggtt
tctcttcccaaaggtcgaaagcttctttctaaacttctgaagctgcttttccctggtagt
gagcttgcacgaattgtctgtatggctatcttccgtcacttacggttcttgtttggtgga
cttccatctgatcctggagcagctgagacaacatctaatctttccaagactgtttctacc
tgtgttaatggtatggaccttcgtgcactaagtgcttgtcttgttgctgttgtctgttcc
tcagagcagccaccactacgcccccttggaagttctgctggagatggggcctctattgtt
ctgaagtccattcttgaaagagctaccgaactattaactgatcctcatgctgctagtaac
tgtagcatgcctaaccgtgcactctggcaggcatcctttgatgaattcttcagtcttctt
accaagtactgtgtgagtaaatatgagactatagtgcagtcattattttcgcagacgcca
tcgagcaccgatgttatagggtcagaggcagccagagccatcagccgtgaaatgcctgtg
gagcttcttcgtgctagtcttccccacacaaatgaaccccagaggaagcttttaatggat
tttgcccagcgttccatgccagtttctggattcagtgcccatggtggaagtagtgggcaa
atgaattcagaatcagttaggggttag

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