Cucumis melo (muskmelon): 103493306
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Entry
103493306 CDS
T03195
Name
(RefSeq) chloride channel protein CLC-c isoform X1
KO
K05016
chloride channel 7
Organism
cmo
Cucumis melo (muskmelon)
Brite
KEGG Orthology (KO) [BR:
cmo00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
cmo01009
]
103493306
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cmo04131
]
103493306
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
cmo04040
]
103493306
Protein phosphatases and associated proteins [BR:
cmo01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
103493306
Membrane trafficking [BR:
cmo04131
]
Endosome - Lysosome transport
Others
Lysosomal membrane proteins
103493306
Ion channels [BR:
cmo04040
]
Chloride channels
Chloride channel (CLC)
103493306
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Voltage_CLC
CBS
Motif
Other DBs
NCBI-GeneID:
103493306
NCBI-ProteinID:
XP_008452224
UniProt:
A0A1S3BUH5
LinkDB
All DBs
Position
6:18590195..18598146
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AA seq
789 aa
AA seq
DB search
MSTAKLLRHIPDPIDENHDNNREIDPSDRLVGSPFAEDRDSVSLTLGEPLLRTSTARIST
TSQLAIVGSNICPIESLDYEIIENELFKQDWRSRRKIEIFQYIILKWALCLCIGLITGLV
GFFNNIAVENIAGHKLLLTNNLMLKEKYFQAFVVYVGSNSVLAVAAAILCAYIAPAAAGS
GIPEVKAYLNGIDAYSILAPSTLFVKIFGSIFAVAGGFVVGKEGPMVHTGACIASLLGQG
GSRKYRLTWKWLRYFKNDRDRRDLITCGAAAGVAAAFRAPVGGVLFALEEAASWWRSALL
WRTFFTTAVVAVVLRSFMEFCRGGQCGLFGEGGLIMFKINTENSTYGTPDLIAIVLLGVI
GGVFGSLYNYLVDKVLRTYSIINERGPGTKLILVVAVSILTTCVSFGLPWLSQCLPCPTD
LDDQCPTVGRSGNYKNFQCPPGHYNDLASLFFNTNDDAIRNLFTSANDKHFQLSSLFVFF
VSIYCLGIITYGIAVPSGLFIPVILAGASYGRIVGRLFGSVATLDVSLYALLGAASFLGG
TMRMTVSLCVILLELTNNLLMLPLLMLVLLISKSVADIFNKGVYDQIVKMKGLPFMEAHA
EPFMRQLVAGGVASGPLITFSGIEKVDNIVHALKMTNHNGFPVIDEPPFSDSSELCGLVL
RSHLLVLLREKKFTKKKVSLRSEIWRGFKAHDFAKPGSGKGVKLEDLEFNEEELEMFVDL
HPITNTSPYTVVESMSLAKAAILFHALGLRHLLVVPKTPGRPPIAGILTRHDFMPEHILG
LYPHLNPHK
NT seq
2370 nt
NT seq
+upstream
nt +downstream
nt
atgtctacagcaaagcttcttcgccatatccctgaccccatcgatgaaaatcatgacaac
aaccgtgaaattgacccctctgacaggcttgtcggatcgcccttcgccgaagatagagat
tctgtttcccttactcttggcgagccactcttgcgtactagtaccgccaggatcagtact
acctcccagcttgccattgttggttctaatatctgtcctattgagagcctcgactacgag
attattgagaatgaacttttcaagcaggattggaggtccagaagaaaaattgagatattt
cagtatatcattctcaaatgggcgttgtgcctttgcattggtttaattacagggcttgtt
ggcttcttcaataacatagctgttgagaacattgctggtcacaaacttctcttaacaaat
aatctcatgctcaaggaaaagtactttcaggcatttgtagtatacgttggttccaatagt
gtgttagctgttgctgctgcaatcctctgtgcctatattgcccctgctgctgcaggttct
ggcatacctgaggtgaaagcatacctcaacggtatagatgcttattctatattggctcca
agcaccttatttgtgaagatttttggttccatatttgctgttgccgggggatttgttgtg
ggtaaggaagggcccatggttcatactggtgcatgcattgcctcattactgggacaagga
ggctctcgcaaatatcggttgacttggaagtggctcagatattttaaaaatgatagggac
aggcgggatttaatcacttgtggtgcagcagctggtgtagcagctgcctttcgggctcca
gtgggtggcgttctctttgcacttgaagaggcagcttcatggtggaggagtgctcttctc
tggaggacctttttcacgactgctgtagtagctgttgtcttaaggagtttcatggaattt
tgccgagggggacaatgtgggttatttggcgaagggggtctcatcatgttcaagatcaat
actgaaaactccacttatggtaccccagatcttattgcaattgttttacttggagttatt
ggcggtgtgtttggaagcctttacaactacctcgtggataaggttctccgaacctacagc
atcataaatgagagaggtcccggcacgaaacttatccttgttgttgccgtttccatattg
acaacttgtgtctcatttggtcttccttggttatcacaatgtttaccatgcccaactgac
ttggatgatcaatgcccaaccgttggtcgctcaggaaactacaagaacttccaatgccca
cctggccattataatgatcttgcttctttatttttcaataccaatgatgatgccatccga
aacctgttcacatctgctaatgacaagcactttcagctctcctcactatttgtcttcttt
gtttctatctattgtcttggcattattacttatggcattgctgtgccttctgggctcttc
attcctgttattctggccggggcctcttatggtcgcattgtagggagattatttggttca
gttgctactcttgatgtcagtctctatgcccttctcggagctgcatccttccttggtggc
actatgagaatgactgtttctctctgtgtcatactccttgagcttactaataaccttttg
atgctcccattactaatgttggttcttctaatttcaaagtcggtggcagatatttttaat
aaaggtgtctatgatcagattgtgaagatgaaaggactaccttttatggaagcccatgca
gaaccatttatgaggcaattggtcgctggtggtgtggcttctggtcccttaattacgttt
tctgggatcgaaaaggtcgataacattgtccatgctttgaaaatgacaaaccacaatggg
tttcctgtaattgatgaaccgcctttctcagatagttcagagctttgtgggcttgttctg
aggtctcatctacttgttttgcttagagaaaaaaaatttactaagaaaaaggtgtcactt
agatcagaaatttggaggggcttcaaagcacatgattttgcaaaaccaggttctggcaaa
ggggtgaaactggaagatttggaattcaacgaggaggagctggaaatgtttgttgatctt
catcccattacaaacacgtcaccctacacagttgtagaatcaatgtcactagccaaagcc
gcaattctctttcatgcactgggcttgaggcacttgttggtggttccaaagacacctggg
aggcctcctattgctggaattcttacacgacacgacttcatgccggagcatattctggga
ctttacccgcatctcaacccccacaagtag
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