Cucumis melo (muskmelon): 103493470
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Entry
103493470 CDS
T03195
Name
(RefSeq) autophagy-related protein 18b isoform X1
KO
K17908
autophagy-related protein 18
Organism
cmo
Cucumis melo (muskmelon)
Pathway
cmo04136
Autophagy - other
Brite
KEGG Orthology (KO) [BR:
cmo00001
]
09140 Cellular Processes
09141 Transport and catabolism
04136 Autophagy - other
103493470
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cmo04131
]
103493470
03029 Mitochondrial biogenesis [BR:
cmo03029
]
103493470
Membrane trafficking [BR:
cmo04131
]
Autophagy
Autophagosome formation proteins
Atg18-Atg2 complex
103493470
Mitochondrial biogenesis [BR:
cmo03029
]
Mitochondrial quality control factors
Mitophagy factors
Autophagy-related proteins
103493470
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PROPPIN
WD40_Prp19
WD40_WDHD1_1st
Beta-prop_EML_2
Beta-prop_WDR90_POC16_2nd
WD40_CDC20-Fz
Beta-prop_Vps41
BCAS3_WD40
WD40_MABP1-WDR62_1st
Motif
Other DBs
NCBI-GeneID:
103493470
NCBI-ProteinID:
XP_008452439
UniProt:
A0A1S3BUM5
LinkDB
All DBs
Position
5:complement(25440354..25448996)
Genome browser
AA seq
370 aa
AA seq
DB search
MANQPSSYPILCASFNQDASLFAIGTRDGFRIFDSNSGRLCYERVLGAFNIVEMLFSSNL
VAIVGAGEQPSLSPRRLCLFNTMSGNALRELNFLTSILAVRMNRKRLVVLLQDKTYIYDI
NSLTILDTIDTVPNSKGTCAFSPSLDGCFLAIPASITKGSLLLYNVMELQLHCEIDAHRA
PLATMVLSSNGMYIATASEQGTMIRVHLVSEATKSYSFRRGSYPSTIFSLSFGPCSQVPE
ILVATSSSGSVHVFPLGFAINQRSSRRSGGFLGSIMPDSISDALDPAHHHIVHNAAPAGI
KSYAVIRKVDRVSNTSSSEIVSCQATLAIITYNGYFQEYTLSLNNHNEFSRSLDREFNLM
TVITDNDIRL
NT seq
1113 nt
NT seq
+upstream
nt +downstream
nt
atggcaaatcaaccgtcttcgtaccccatcctatgtgcttccttcaatcaggatgctagt
ttatttgcaataggcacaagagatggtttccgaatatttgattccaatagtggaaggcta
tgctatgaacgagttcttggtgcattcaatattgttgagatgctgtttagctctaatctt
gttgccattgttggagctggtgaacagccatctttatccccacgtcgtctttgcttgttt
aatacaatgagtggaaatgctcttagagaactgaattttttaacttcaatactagctgtt
cgcatgaataggaaaagacttgttgtactactgcaagataagacatacatatatgacata
aatagtctcacaatcttggacacgattgatacggtaccaaattcaaaaggaacctgtgca
ttctcccccagtttggatggttgcttcttagctattccagccagcatcaccaagggatct
ctgttgctgtacaatgtcatggagcttcagttgcactgcgagattgatgctcatcgtgca
ccactagccacaatggttctttcttcaaatgggatgtacatagcaacagcatcagaacaa
ggaactatgattagagttcatctggtatctgaagcaacaaagtcgtatagttttcgcaga
ggatcatatccatcaactatattttccttgtcctttggtccatgttctcaagttccagaa
attttggtggcaactagttcttctggttctgttcatgtttttcctcttggatttgctata
aaccaaagaagcagcagaaggtcaggtggttttcttggatcgataatgcccgactcaata
agtgatgcactagatccagcgcatcatcacatagttcataatgctgcaccagcaggaatc
aaaagctatgcagtgatacgcaaggtcgacagggtttctaacacttcaagttctgaaatt
gtatcttgccaggccacattagcaatcatcacctacaatggttacttccaggagtacacc
ttaagtctcaacaaccacaatgaattctcaagaagtctggatcgcgaattcaatcttatg
actgtgataactgataacgacattaggttatga
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integrated database retrieval system
