KEGG   Cucumis melo (muskmelon): 103493552
Entry
103493552         CDS       T03195                                 
Name
(RefSeq) protein ROOT INITIATION DEFECTIVE 3
  KO
K14829  pre-rRNA-processing protein IPI3
Organism
cmo  Cucumis melo (muskmelon)
Brite
KEGG Orthology (KO) [BR:cmo00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:cmo03009]
    103493552
Ribosome biogenesis [BR:cmo03009]
 Eukaryotic type
  Pre-60S particles
   5-FMC complex
    103493552
SSDB
Motif
Pfam: WD40_Prp19 WD40 WD40_CDC20-Fz WD40_WDHD1_1st Beta-prop_EML_2 Beta-prop_EML Beta-prop_TEP1_2nd EIF3I WDR55 Beta-prop_CAF1B_HIR1 NBCH_WD40 Beta-prop_TEP1_C Beta-prop_DCAF4 WD40_MABP1-WDR62_2nd Beta-prop_WDR90_POC16_2nd ANAPC4_WD40 WDR90_beta-prop_4th Beta-prop_IP5PC_F WD40_MABP1-WDR62_1st Beta-prop_VPS8 Beta-prop_HPS5 Beta-prop_IFT140_1st Beta-prop_RIG_2nd Beta-prop_LRRK2 Beta-prop_Nup120_160 Beta-prop_SCAP Beta-prop_SPT8 Beta-prop_Vps41 Nucleoporin_N WDR54 Beta-prop_DCAF12 Beta-prop_IFT122_1st Beta-prop_WDR19_1st Beta-prop_BBS7 DUF465 DUF6138
Other DBs
NCBI-GeneID: 103493552
NCBI-ProteinID: XP_008452567
UniProt: A0A1S3BU36
LinkDB
Position
7:2261051..2264668
AA seq 447 aa
MVLLVASSSIDSGIGCWDLHTGAEHLRYKSCASPPHGLVCVGEKFLACSQLRDAAATAGS
VLYWSWCKPQVEVKSFPAEPIMALASNNEGTYIVGGGFSGDIYLWEVLSGRLLKKWHAHY
RAVTCLVFSEDDSLLISGSEDGCIRVWSLITVFDDGWQREAKHLYEHSFTGHNLPVTDIV
VGYGGFNAIIISSSVDRTCKVWSLSKGKLLRNIIFPSIIDAIALDPGEHVFYGGGRDGKI
YTAALNAKCPSSSDYGLHILGSLSNQSKSVTSLAYCSSGNLLISGSEDGAIRVWDTRTNN
VIRVFRHSKGPVNNILLVQQQPLPKSQSTSQGSLRKHRPILPPALAKFENSKDEDEYTGV
IIDPSGPPKESMEFSFLSSHVMDNQITELQQQGSAATEMELERLKHDYGKSKQMLQHWRK
MYDNLHQFCVNELLDGNQTKNIEGNST
NT seq 1344 nt   +upstreamnt  +downstreamnt
atggtgctactggttgcttcgtcgtctattgattcagggattggttgctgggaccttcat
accggcgcagaacatctgcgttacaagtcttgtgcttctccgccacatggtcttgtttgt
gtcggtgaaaagtttctcgcgtgctctcagcttcgcgatgctgcagctactgctggctcc
gttctctactggtcttggtgtaagcctcaagttgaagttaagagttttccggctgaacca
ataatggccttggcttccaacaatgagggtacttatattgttggtggtggtttctctgga
gatatatacttatgggaggttttaagtggtagactgcttaaaaaatggcatgctcattat
agggcagttacttgccttgttttctctgaagatgactccctgttaatttctggttctgaa
gacggctgcattagagtttggtcccttataacggtttttgatgatggatggcaaagggaa
gcaaaacatttgtatgagcatagtttcactgggcataatctgcctgttactgacattgtt
gttggctatggaggattcaatgctattataatctcttcctctgtggatcgtacttgtaag
gtgtggagcttatcgaaggggaagttattaagaaatatcatatttccttcaatcattgat
gccattgctttggatcctggtgagcatgtcttttatggtggtggcagagatgggaagatc
tacactgctgcgcttaatgctaaatgcccatccagcagtgactacggattgcatatactt
gggtcattgtcaaatcaaagcaagtcagttacttccttggcatactgctcaagtggtaat
ttgttgatctctggatctgaggatggagcaataagagtttgggatacacgaaccaataat
gttattcgtgttttcagacattcaaaaggtcctgtaaacaatatacttcttgttcaacaa
cagcccctccctaaatcacagtcaacttcccaaggttctttgagaaagcaccggccaatc
ttaccacctgccctcgctaaatttgagaactctaaggacgaggatgaatacactggtgtt
atcattgatccatcaggtcctcccaaggaatctatggagttttctttccttagttctcac
gttatggataatcaaatcacagaacttcagcaacagggttctgctgccacagaaatggag
ttggaaagacttaagcatgattatggaaaatccaagcaaatgctacaacactggagaaaa
atgtacgacaatttacatcaattttgtgttaatgagcttctggacggcaatcaaactaaa
aatatagaaggcaattccacttga

DBGET integrated database retrieval system