Cucumis melo (muskmelon): 103494104
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Entry
103494104 CDS
T03195
Name
(RefSeq) uncharacterized protein LOC103494104
KO
K03136
transcription initiation factor TFIIE subunit alpha
Organism
cmo
Cucumis melo (muskmelon)
Pathway
cmo03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
cmo00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
103494104
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cmo03021
]
103494104
Transcription machinery [BR:
cmo03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIE
103494104
Prokaryotic type
Archaeal type
TFE
103494104
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TFIIE_alpha
wHTH-PRTase_assc
Zn_Ribbon_TF
GntR
Dimerisation
MerR
CggR_N
Motif
Other DBs
NCBI-GeneID:
103494104
NCBI-ProteinID:
XP_008453364
UniProt:
A0A1S3BW39
LinkDB
All DBs
Position
2:23772623..23778737
Genome browser
AA seq
475 aa
AA seq
DB search
MSIEPFNRLVKLAARAFYDDITTKGDNQPKTGRSDNRGIAVVVLDALTRRQWVREEDLAK
NLKLHSKQLRRTLRFLEEEKLITRDHRRETAKGAKIFSAAVAATADGQHQTKEGDEKIKM
HTHSYCSLDYAQIYDVVRYRMHRMKKKLKDELEDKNTVQEYICPNCSRRYTALDALRLIS
FEDEYFHCENCNGELVAESDKLAAVQGGDGDDNARKRRHEKLKDMLQKMEAQLKPLVEQL
TRVKDLPVPEFGTLLAWEARASAAARGVNGDLNGNDPSKSSQGYGGTPMPFVGETKVEVA
FSGAEGKGVDVKSESKNTGLKVLPPWMIKQGMNLTKEQRGEVKDESKTDAGSASAQFSDD
KKSLANDDDKTNIQDEYVKAYYAAILKKQQELEEAAKGQQELSSTEVTESVANTNSSRRV
GMKAKREEDDDDDDIEWEEAPIGGNANENYKVDLNVEASALVEDEEEDDVDWEEG
NT seq
1428 nt
NT seq
+upstream
nt +downstream
nt
atgagtatcgaaccttttaacaggttggtgaagctagctgcgagagctttctacgatgac
attaccactaaaggggataatcaacccaagaccggtcggagtgataataggggaattgcg
gttgttgttcttgatgctcttaccagacggcaatgggttcgggaagaagatttggcaaag
aacttaaaactacattcaaagcaattacgccgaaccctaaggtttttagaagaggaaaaa
ctgattacccgagatcatagaagggagacagccaagggagcaaagatatttagtgctgcg
gttgctgccacagccgatggtcaacaccaaacgaaggagggggatgaaaagattaagatg
cacacacactcttattgctcactagactatgcacagatctatgatgtggttagatacaga
atgcaccgcatgaagaagaaactgaaagatgaactggaggacaagaacacagttcaagag
tatatatgccccaattgttcaagaaggtacactgctttggatgctcttcgattaatctct
tttgaggatgaatacttccattgtgaaaattgcaatggagagctagttgcagagagtgac
aaactggctgctgtccaaggaggggatggagatgataatgccaggaagcgtcggcatgaa
aagttgaaggacatgctccaaaagatggaggcccagcttaaacctctagtggaacaactc
acccgagtcaaagatttgcctgttccagaatttggaactcttttagcatgggaagctcgt
gccagtgcagctgcacggggtgtaaatggtgatcttaatggcaatgatccctcaaaatca
tcacaaggttatgggggcacacctatgccttttgttggtgagaccaaggttgaagttgcc
ttttctggggctgagggtaaaggagtggacgttaaatctgaatccaagaacacaggtctg
aaagttttacctccttggatgatcaagcaaggaatgaacctcacgaaggaacaacgcgga
gaggtcaaagacgagtcaaagacagatgctggttcagcttctgctcagttttctgatgat
aaaaagtcattggctaatgatgatgataaaacaaatatacaggatgagtatgttaaagct
tattatgctgctatactgaagaagcaacaagagcttgaagaagctgctaagggacaacag
gaattatccagtacagaggttactgaaagcgtggctaacacaaattctagtcgccgggtg
ggaatgaaggccaagcgtgaagaggatgatgatgatgatgatattgagtgggaggaggct
ccaataggtggtaatgcaaatgaaaattacaaggttgacttgaacgttgaagcatcagct
ttggtagaagatgaagaagaagatgatgtggattgggaggaaggttga
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integrated database retrieval system
