Cucumis melo (muskmelon): 103494321
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Entry
103494321 CDS
T03195
Name
(RefSeq) putative DEAD-box ATP-dependent RNA helicase 29 isoform X1
KO
K14808
ATP-dependent RNA helicase DDX54/DBP10 [EC:
5.6.2.7
]
Organism
cmo
Cucumis melo (muskmelon)
Brite
KEGG Orthology (KO) [BR:
cmo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
cmo03009
]
103494321
Enzymes [BR:
cmo01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
103494321
Ribosome biogenesis [BR:
cmo03009
]
Eukaryotic type
Pre-60S particles
Helicases
103494321
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
DBP10CT
ResIII
P-loop_SecA
Motif
Other DBs
NCBI-GeneID:
103494321
NCBI-ProteinID:
XP_016901387
UniProt:
A0A1S4DZG9
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All DBs
Position
2:21142279..21171985
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AA seq
790 aa
AA seq
DB search
MGKQDELLHVSSKAELKRKEKQQKKAKSGGFESLGLSPNVFRGIKRKGYRVPTPIQRKTM
PLILSGADVVAMARTGSGKTAAFLVPMLERLKQHEPQGGVRALILSPTRDLALQTLKFTK
ELGKFTDLRISLLVGGDSMETQFEELAQSPDIIIATPGRLMHHLAEVDDMTLRTVEYVVF
DEADCLFDMGFAEQLHKILAQLSENRQTLLFSATLPSVLAEFAKAGLRDPQLVRLDLDTK
ISPDLKLVFFTLRQEEKNAALLYLIREKISADQQSLIFVSTRHHVEFLNVLFREEGVEPS
VCYGEMDQDARKIHISRFRARKTMFLIVTDVAARGIDIPLLDNVINWDFPPKPKIFVHRV
GRAARAGRTGTAFSFVTSEDLPNLLDLHLFLSKPIRAAPTEEEVLLDKEGVFSKIDHAIA
SGETVYGRLPQTVIDLASDRIRETIDSSADLISLQKTCSNAFRMYSKSKPLPSKESIRRA
KDLPREGLHPIFKNALEGGELMALAFSERLKTFRPKQTILEAEGETIKSRHRQGSSQWVD
VMKRKRAIHEEVINIVHQQRFAKHVEEDLPLENISPKDKQKKGPRGLKRRKTTSFKDEEF
YINSVPTNHHTEAGLTVKGDQGFGSNRLDNAVLDLVADDSSGMQKNKSVYHWDKRGKKYV
KLNNGDRVTASGKIKTESGAKVKANQTGIYKKWKERSHNKISLKGISNGEHDGDAKNTGG
NQQFSGNKRRFGQGKNKHSVPNAHVRPEVKNLEQIRKERQKKANKIQHMKNNKPTRGKKS
GKRGSGRKAK
NT seq
2373 nt
NT seq
+upstream
nt +downstream
nt
atggggaagcaggacgaacttctccatgttagttccaaagcggagcttaagcgaaaagag
aagcagcagaagaaggcaaagtctggcgggttcgagtccttaggtctcagtcccaatgtc
ttcaggggaatcaagcgcaagggttacagagtgcccactccaattcagaggaaaaccatg
cccctcattctttctggggccgatgtcgtggccatggcacgcactggttccggtaaaact
gctgcctttttggtgcctatgttggagcgccttaaacagcacgaacctcagggtggtgtt
cgggctcttattttgtctcctacaagggacttggcgcttcaaactcttaagtttactaag
gagcttggaaaattcacggatcttcgaattagtttattggtaggcggtgatagtatggaa
acccagtttgaagaattggctcaaagtcctgatattataattgctactcctggaaggctg
atgcatcatttggccgaggttgatgacatgaccttgcgcacagtggaatatgtagttttt
gatgaagctgattgtctctttgacatgggttttgctgagcagttgcataaaatccttgca
caactgagtgagaaccgtcagaccttgctttttagtgcgaccttaccaagtgttcttgca
gagtttgcgaaggctggtcttcgtgatccccagcttgtgcgccttgatttagacactaag
attagccccgatctaaagcttgtcttttttactttgcgtcaagaagagaaaaatgcagca
ttgttgtatttgatcagagagaaaatcagtgcggatcaacaaagtttgatttttgtatcc
actaggcatcatgtggagttcttaaatgttttgttcagagaggaaggtgttgagccgtct
gtctgttatggtgaaatggaccaagatgctcgcaagattcatatatcaagatttagggca
agaaaaacaatgttcttaatagtgactgatgttgcagctaggggcattgacatcccattg
cttgataatgttatcaactgggacttccctccaaaacccaaaatcttcgtacaccgagtt
ggacgagctgcaagggctggtcgaactggtacagcattttcatttgtgacttctgaagat
ctccctaaccttttagatcttcatctttttctctcaaaacctataagagctgcacctact
gaggaggaggtcttacttgataaggagggggtattctctaaaatagaccatgcaattgca
agtggagaaactgtatatggacgtctccctcagacagtaattgatcttgcttctgataga
attagagaaacaattgattcttctgcagacttgatttctctgcagaaaacttgttcaaat
gcatttcgtatgtattcaaagtcaaaacctctaccttcaaaagagtctatcagaagagca
aaagacttacctcgtgaagggttgcatccaatctttaaaaatgctcttgaaggtggtgaa
ttaatggcattggccttctcagagcgtttaaaaacattcagacccaagcagacaatactg
gaggctgaaggagaaactatcaagtcaaggcatagacagggttctagccaatgggttgat
gtaatgaagagaaaaagagctattcatgaggaggtcattaacatagttcatcagcaacgg
tttgctaaacatgtggaggaggatctcccattggaaaacatttctccaaaggataaacag
aagaaaggacctcgaggattaaagagaagaaagactacaagtttcaaggacgaggagttt
tacataaattcagtaccaacaaatcatcatacagaagcagggttaacggtgaagggtgat
caaggctttgggtctaacaggttggataatgcggttctggatctagtagctgatgatagt
tctggaatgcagaaaaataaatctgtataccattgggacaagaggggcaagaaatatgtg
aagttaaacaatggggatagggtcacagccagtggaaagataaagacagaaagcggtgca
aaagtaaaagctaaccagaccggcatatacaaaaaatggaaagaacgatcacataataag
atctctctcaaaggaattagtaatggagaacacgatggggatgccaaaaacactggtggg
aatcaacaattttcgggaaataaaagaaggtttggccagggaaaaaacaagcattcagtg
cctaatgcgcatgtgcggcctgaagttaaaaatcttgagcaaattcgaaaggaacgacag
aaaaaggcaaataaaattcaacacatgaagaacaacaaacctacgaggggtaagaaatcc
ggtaaaaggggaagcggaagaaaggctaagtag
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