Cucumis melo (muskmelon): 103494470
Help
Entry
103494470 CDS
T03195
Name
(RefSeq) pre-mRNA-splicing factor 38
KO
K12849
pre-mRNA-splicing factor 38A
Organism
cmo
Cucumis melo (muskmelon)
Pathway
cmo03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
cmo00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
103494470
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
cmo03041
]
103494470
Spliceosome [BR:
cmo03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-snRNP related factors
103494470
Complex C
U4/U6.U5 tri-SnRNP related factors
103494470
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PRP38
PRP38_assoc
HIND
Motif
Other DBs
NCBI-GeneID:
103494470
NCBI-ProteinID:
XP_008453888
UniProt:
A0A1S3BXB0
LinkDB
All DBs
Position
5:26320134..26323601
Genome browser
AA seq
397 aa
AA seq
DB search
MANRTDPAAKSIRGTNPQNLVEKILRSKIYQNTYWKEQCFGLTAETLVDKAMELDHLGGT
YGGNRKPTPFMCLVMKMLQIQPEKEIVIEFIKNEDYKYVRVLGAFYLRLTGTDVDVYRYL
EPLYNDYRKLRRKLSDGCFSLSHVDEVIDELLTKDYSCDIALPRVKKRWTLESSGSLPPR
KSALEDDFEEEEEKEEAEPINDSLEDDIHEKNYYRGRSPVRERDRDRRRDSHRHRDRDYD
RDRDYDRDYDRDRGRGRERDRDRERDRDRERDRDRDRERERDRDRDRYRLRDEKEYGRDR
DREREGRERERRDRDRGRRRSHSRSRSRSKDREDGEYRKRHSRSSVSPRRRDGVEDREEP
KKKKEKKEKKEGGAGEEDPEIAEWNRIRASLGLAPLK
NT seq
1194 nt
NT seq
+upstream
nt +downstream
nt
atggctaatcggacagacccagctgcgaaaagcattaggggaacgaacccgcagaaccta
gtggagaagattcttcgctccaagatttaccagaacacttactggaaggaacaatgtttt
gggttaacggcggagacattggttgataaagccatggagctcgaccacctcggcggtaca
tatggtggcaaccgcaagcccacgccgttcatgtgtcttgtcatgaagatgctccagatt
cagccggagaaggaaatcgtgatcgagttcattaagaatgaagactacaaatatgttcgg
gttcttggtgccttttacttgcgtctcactgggactgatgttgatgtatatcgttacctg
gaacctttgtacaacgactatcggaaattgaggagaaaattatctgatggatgtttttct
ttatcgcacgtggatgaagtcattgatgaacttcttactaaagattattcatgtgacatt
gctctgccgcgtgtcaaaaagagatggactcttgaatcttctggttcattgcctccaagg
aaaagtgctttagaagatgactttgaggaggaggaagaaaaggaggaggcggagccaatt
aatgattctttagaagatgatattcatgaaaagaattattatcgtgggagaagtccggtg
cgggagagagacagagacagaaggcgtgatagtcatagacacagggaccgagattatgat
agagaccgagactatgacagagactatgacagagatcggggacgtggaagggaaagagat
agagatcgagaaagggatcgagacagggaacgggacagagatagagacagagagagagag
agggatagggatagggatcgctatcgcctaagggatgagaaggaatatggtagagatcga
gatagggaaagggaaggcagggaacgggagagacgagatagagaccgtggtagaagaagg
agccattcaagaagccgaagtaggagtaaagaccgagaagatggggagtaccggaagaga
cacagccgtagcagtgttagtcctagaagaagggatggagtggaggatagggaggagccg
aagaagaagaaagaaaagaaggagaaaaaggaaggtggggcaggtgaggaagatccagag
attgcagaatggaataggattcgagcttctcttggactggcacctctcaagtag
DBGET
integrated database retrieval system