KEGG   Cucumis melo (muskmelon): 103494470
Entry
103494470         CDS       T03195                                 
Name
(RefSeq) pre-mRNA-splicing factor 38
  KO
K12849  pre-mRNA-splicing factor 38A
Organism
cmo  Cucumis melo (muskmelon)
Pathway
cmo03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:cmo00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    103494470
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:cmo03041]
    103494470
Spliceosome [BR:cmo03041]
 Complex B
  U4/U6.U5 tri-snRNP components
   U4/U6.U5 tri-snRNP related factors
    103494470
 Complex C
   U4/U6.U5 tri-SnRNP related factors
    103494470
SSDB
Motif
Pfam: PRP38 PRP38_assoc HIND
Other DBs
NCBI-GeneID: 103494470
NCBI-ProteinID: XP_008453888
UniProt: A0A1S3BXB0
LinkDB
Position
5:26320134..26323601
AA seq 397 aa
MANRTDPAAKSIRGTNPQNLVEKILRSKIYQNTYWKEQCFGLTAETLVDKAMELDHLGGT
YGGNRKPTPFMCLVMKMLQIQPEKEIVIEFIKNEDYKYVRVLGAFYLRLTGTDVDVYRYL
EPLYNDYRKLRRKLSDGCFSLSHVDEVIDELLTKDYSCDIALPRVKKRWTLESSGSLPPR
KSALEDDFEEEEEKEEAEPINDSLEDDIHEKNYYRGRSPVRERDRDRRRDSHRHRDRDYD
RDRDYDRDYDRDRGRGRERDRDRERDRDRERDRDRDRERERDRDRDRYRLRDEKEYGRDR
DREREGRERERRDRDRGRRRSHSRSRSRSKDREDGEYRKRHSRSSVSPRRRDGVEDREEP
KKKKEKKEKKEGGAGEEDPEIAEWNRIRASLGLAPLK
NT seq 1194 nt   +upstreamnt  +downstreamnt
atggctaatcggacagacccagctgcgaaaagcattaggggaacgaacccgcagaaccta
gtggagaagattcttcgctccaagatttaccagaacacttactggaaggaacaatgtttt
gggttaacggcggagacattggttgataaagccatggagctcgaccacctcggcggtaca
tatggtggcaaccgcaagcccacgccgttcatgtgtcttgtcatgaagatgctccagatt
cagccggagaaggaaatcgtgatcgagttcattaagaatgaagactacaaatatgttcgg
gttcttggtgccttttacttgcgtctcactgggactgatgttgatgtatatcgttacctg
gaacctttgtacaacgactatcggaaattgaggagaaaattatctgatggatgtttttct
ttatcgcacgtggatgaagtcattgatgaacttcttactaaagattattcatgtgacatt
gctctgccgcgtgtcaaaaagagatggactcttgaatcttctggttcattgcctccaagg
aaaagtgctttagaagatgactttgaggaggaggaagaaaaggaggaggcggagccaatt
aatgattctttagaagatgatattcatgaaaagaattattatcgtgggagaagtccggtg
cgggagagagacagagacagaaggcgtgatagtcatagacacagggaccgagattatgat
agagaccgagactatgacagagactatgacagagatcggggacgtggaagggaaagagat
agagatcgagaaagggatcgagacagggaacgggacagagatagagacagagagagagag
agggatagggatagggatcgctatcgcctaagggatgagaaggaatatggtagagatcga
gatagggaaagggaaggcagggaacgggagagacgagatagagaccgtggtagaagaagg
agccattcaagaagccgaagtaggagtaaagaccgagaagatggggagtaccggaagaga
cacagccgtagcagtgttagtcctagaagaagggatggagtggaggatagggaggagccg
aagaagaagaaagaaaagaaggagaaaaaggaaggtggggcaggtgaggaagatccagag
attgcagaatggaataggattcgagcttctcttggactggcacctctcaagtag

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