Cucumis melo (muskmelon): 103494479
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Entry
103494479 CDS
T03195
Name
(RefSeq) splicing factor-like protein 1
KO
K13095
splicing factor 1
Organism
cmo
Cucumis melo (muskmelon)
Pathway
cmo03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
cmo00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
103494479
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
cmo03041
]
103494479
Spliceosome [BR:
cmo03041
]
Complex A
Other components
Complex A specific factors
103494479
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
SF1-HH
KH-I_KHDC4-BBP
RRM_1
KH_1
KH_12
eIF3g
PHD_4
KH_PNO1_2nd
RRM_5
zf-CCHC
DUF6319
RapA_C
DUF7227
Motif
Other DBs
NCBI-GeneID:
103494479
NCBI-ProteinID:
XP_008453901
UniProt:
A0A1S3BY50
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Position
7:26810177..26814949
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AA seq
778 aa
AA seq
DB search
MDSINSNPNPNSAIETLVPYPPDYSTPEDHDRDPNSLLKEMDKGENTGFSSGNGHAENQP
ADGVNHGPKVEIIQKPLLSENGFTNTHSGTDKDFSGGEEETTSRRRRRSRWDPQPESNEQ
SGGESGSGTRKRKSRWADDDPKPVIQLPDFMGGIEFDPEIQALNSRLLEISRMLQSGMPL
DDRPEGARSPSPEPIYDNMGIRINTREYRAREKLNTERQEIISQIIKKNPAFKPPADYRP
PKLQKKLYIPMKEYPGYNFIGLIIGPRGNTQKRMEKQTGAKIVIRGKGSVKEGRLQQKRD
LKHDPAENEDLHVLVEAETQESLEAAAEMVEKLLQPVDEVLNEHKRQQLRELAALNGTIR
DEEFCRLCGEAGHRQYACPSRTSTFKSDVLCKICGDGGHPTIDCPVKGTTGKKMDDEYQN
FLAELGGTIPESATKQTPTLAIGSGTSGTNPPWANNTTSASNTPQTSVGANGVKPAKEYD
DTNLYIGYLPPTFDDDGLIRLFSTFGDIVMAKVIKDRVSGLSKGYGFVKYSDVQMANNAI
ASMNGYRLEGRTIAVRVAGKPPQPTVPPCPPASTVPTYPVSSQPVGVYPSQQFMPGGPLG
NVPPPTSYSATPVPWGPPVPSPYASYPPPPPGSNVYPAVQGQGMPPYGVQYSQVQTAPPG
APSQPVTSGEAQQSFPPGLPSENPTSQPLQTTAYGNTLYSMPPSAQPSYPPSYGYSAYYS
AVSTHPLPLSTSTTDQPQPPSGAAPWATNPPMPPPMPSAEKTSSGADAEYEKFMADMK
NT seq
2337 nt
NT seq
+upstream
nt +downstream
nt
atggactctatcaactcaaaccctaaccctaattccgccattgaaacccttgttccttat
cctcccgattattctactcccgaagaccacgatcgcgaccccaactccttattaaaagaa
atggataagggtgaaaacacggggtttagttctggaaacgggcatgcggaaaaccaacca
gctgacggtgttaatcatgggccaaaggtggagattattcagaagccgctgttgtcggag
aatggatttacgaacactcatagtggtaccgataaggatttctccggtggtgaagaggag
actaccagcaggcgacgacgtcggagccgatgggacccgcagcctgagagtaatgaacag
agtggtggggaatctgggagtggtacgcggaagaggaagtctcgttgggctgacgatgat
cccaaacctgtaattcaacttcctgattttatgggaggtattgagttcgaccctgaaatt
caagctttgaatagtaggcttttagaaattagtagaatgcttcaatctggtatgccgttg
gatgatcggcctgaaggtgctcgttctccttcgccggagccaatttatgacaatatggga
ataagaatcaatactagggagtatcgtgctcgagaaaaattgaacacagagagacaagag
attatttctcaaataatcaagaagaaccctgcttttaagcctccggcagattataggccg
cctaagcttcagaagaagctttatataccgatgaaggaatacccaggttacaattttatt
gggctgattattggtcctagaggtaatacacagaagaggatggagaaacaaactggcgca
aaaattgtaattaggggaaaagggtctgtaaaagaaggtagattgcaacagaagagggat
ttaaagcatgatcctgcagagaacgaggatttgcatgttctagttgaggctgaaacgcag
gaatcactagaagctgcggcggaaatggtagagaagcttttgcagcctgttgacgaagtt
ttgaatgagcataagaggcagcaacttagggaacttgctgccttgaatggaaccataagg
gatgaagaattctgtaggttgtgtggcgaggctgggcatcgtcagtatgcttgcccttcg
cggacgtcgacattcaagagtgatgtactctgtaaaatatgtggtgatggtgggcatcca
acaattgattgtccagtgaagggcacaactgggaaaaagatggatgatgaatatcaaaat
ttcttggcagagttaggaggtacaattcccgaatcagcaaccaagcagacccctacattg
gcaataggttctggcacttcaggaaccaaccctccttgggctaacaatacaaccagcgct
agcaacacaccacaaacaagcgtcggtgcgaatggagtgaagcctgctaaggaatatgac
gatacaaacttgtatataggttacttgcctcctacttttgatgatgatggtttgattaga
ttgttttcaacatttggcgatattgtgatggctaaggtcattaaggatagggtttccgga
ttgagcaaaggttatggatttgtgaagtattctgatgttcagatggctaataatgcaatt
gccagcatgaatggttatcgtcttgaaggccgaacaattgctgttagagttgctgggaag
ccaccacagcctactgtgcctccttgccctccagcgtcgactgtgcccacttatcccgtt
tcaagccagcctgttggtgtctatccgtcccagcagtttatgccgggtggtcctcttggg
aatgttcctccacctacaagttattctgctaccccagttccatggggtcctccagttcct
tctccgtatgcttcttaccctcctccacctcccggttctaacgtctatccggctgttcag
ggtcagggtatgcctccttacggcgtccagtattctcaggttcagacagctccccctggt
gctccatctcaacctgtgacttcaggtgaagcacaacagagttttcccccaggattgcca
tctgaaaatcctactagccagccattacaaactacggcatatgggaacactttatattcg
atgccaccgagtgctcaaccttcttacccgccttcgtatggttattcggcttattatagt
gcggtctctactcatccgttgcccctgtctacgtcaactacggaccaacctcaaccaccc
agcggggctgctccttgggctacaaatcctccaatgcctcctcccatgccttctgctgag
aagacgtcgtcaggtgcagatgctgagtacgaaaagtttatggcagatatgaaatga
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