Cucumis melo (muskmelon): 103494620
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Entry
103494620 CDS
T03195
Name
(RefSeq) putative RNA polymerase II subunit B1 CTD phosphatase RPAP2 homolog
KO
K20827
RNA polymerase II-associated protein 2 [EC:
3.1.3.16
]
Organism
cmo
Cucumis melo (muskmelon)
Brite
KEGG Orthology (KO) [BR:
cmo00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
cmo01009
]
103494620
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cmo03021
]
103494620
Enzymes [BR:
cmo01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.3 Phosphoric-monoester hydrolases
3.1.3.16 protein-serine/threonine phosphatase
103494620
Protein phosphatases and associated proteins [BR:
cmo01009
]
HAD phosphatases
Fcp/Scp phosphatases
103494620
Transcription machinery [BR:
cmo03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Others
103494620
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RPAP2_Rtr1
Motif
Other DBs
NCBI-GeneID:
103494620
NCBI-ProteinID:
XP_008454119
UniProt:
A0A1S3BXZ9
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All DBs
Position
7:27940918..27946475
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AA seq
661 aa
AA seq
DB search
MAKNQSALIKDTVYKLQLALYEGIQNENQLFAAGSLMSRSDYEDVVTERSIANLCGYPLC
HSNLPSDNTRRGRYRISLKEHKVYDLEETYKYCSSACLINSRAFSGRLQDERCSVMNPAK
LKDILKLFENMSLDSKENVGNNCDSGLEIQEKIESSIGEVPIEEWMGPSNAIEGYVPHRD
HKIMTLPSKDGKESKDGSTAKIKPLGGGKDFFSDFSFTSTIITDEEYSVSKISSSLKEMA
LDTNSKIQTGEFCGKESNDQFTILETSHARAPPKNSVGHKARGSKERTKVSATEESTNNL
SDAPSTSNNRSTNFNLVTEEPKGGFNDLRGTEIKSSLKQPGKKNLRRSVTWADEKIDDTS
MNLPEVGEKGKTKECSRITSNLVNFDNDNEDLLRVESAEACAMALSQAAEAITSGQSEVS
EAVSEAGIIILPHPSDANEEASTDPVKASEPHSFSEKSNKLGVLHSDLFDPSESWYDAPP
EGFSLTLSSFATMWMAIFAWVTSSSLAYIYGKDDKFHEEFQYIDGKEYPSKIVSADGRSS
EIKQTLAGCLTRAIPGLASELKLSTPVSRLEYGMAHLLDTMTFLDALPAFRMKQWQVIVL
LFIEALSVCRIPSLASHMSSSRNLYHKVLDRAQIQSDEYEIMKDHILPLGLTAQLSVEND
A
NT seq
1986 nt
NT seq
+upstream
nt +downstream
nt
atggcaaagaatcaatctgctttgattaaagatacagtatataaattgcaacttgcactc
tatgagggcattcaaaatgagaatcagctatttgcagctgggtctctgatgtctcggagt
gactatgaagatgtggtgactgagcggtctattgcaaacctctgtggatatccattatgc
cattctaatttgccgtctgataacactaggagaggccggtacagaatttcattgaaagaa
cataaggtgtatgatttagaagagacatataagtactgctcttctgcttgcctcattaac
agccgtgccttttctgggagattgcaagatgagagatgttcggttatgaaccccgcgaaa
cttaaagatattcttaagctgtttgagaatatgagtttggattctaaggaaaatgtgggg
aataattgtgattcgggacttgaaattcaggagaagatagaaagcagtattggagaagtt
cccattgaagagtggatgggtccatcaaatgcaattgaaggttatgtgccgcacagagat
cataagatcatgactttgcccagcaaggatggaaaagaatccaaggatggttctacagct
aaaattaagccattgggtggtggaaaggatttcttcagcgacttctccttcacaagtact
ataatcacagatgaagagtatagtgtttcaaagatatcatctagtttgaaagagatggct
cttgatactaattcaaagatacaaacaggagaattctgtggtaaagaatcaaatgaccaa
tttaccattttggaaacctcacatgctcgagctcccccaaaaaacagtgttgggcataag
gcaagaggatccaaagaaagaactaaagtatcagccaccgaagaaagtactaataatttg
tctgatgctccttcaacttcaaataaccgcagcactaatttcaatttagtgacagaagaa
ccaaaaggtggattcaatgatcttaggggaactgagataaaatcctcccttaaacaacct
ggcaagaaaaacctgcggcgctctgttacttgggcagatgaaaagattgatgacaccagt
atgaaccttccagaggtcggagaaaaggggaagacaaaggaatgttccagaatcacaagc
aatttggtaaatttcgacaatgataatgaggacctactacgggttgaatctgctgaagcc
tgtgcaatggcactgagccaggcagccgaagcaattacttctgggcaaagtgaggtctct
gaggcagtgtctgaagctggaattattatattgccacatccaagtgacgctaatgaagaa
gcatctactgatcctgtcaaggcatcagaaccacattcattttcagagaagtcaaacaaa
cttggggtattacattctgatctgtttgatcccagtgaatcttggtatgatgcgcctcct
gagggtttcagcctaactttatcttcttttgcaaccatgtggatggcaatctttgcatgg
gtaacctcatcttccttggcctacatttatggaaaagatgataagttccatgaggaattt
caatatattgatgggaaggagtatccaagtaaaattgtctctgctgatggccgatcttct
gaaatcaagcaaacacttgctggatgtctaacacgggcaatacctggacttgcttctgaa
cttaagctatcgaccccagtatcacgtttggagtatgggatggcacacttgttagacacc
atgactttccttgatgctcttccagcattcagaatgaagcagtggcaagtaattgttctc
ttatttattgaagctttatctgtttgccggattccttcacttgcctcccacatgtcaagt
agtagaaatctgtatcataaggtgcttgatcgtgctcagatacaatccgacgaatacgag
ataatgaaagatcatatattacctcttggtctaacagctcaactttcagttgagaatgat
gcctaa
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