Cucumis melo (muskmelon): 103494994
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Entry
103494994 CDS
T03195
Name
(RefSeq) double-strand break repair protein MRE11 isoform X1
KO
K10865
double-strand break repair protein MRE11
Organism
cmo
Cucumis melo (muskmelon)
Pathway
cmo03440
Homologous recombination
cmo03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
cmo00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
103494994
03450 Non-homologous end-joining
103494994
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
cmo03032
]
103494994
03400 DNA repair and recombination proteins [BR:
cmo03400
]
103494994
DNA replication proteins [BR:
cmo03032
]
Eukaryotic type
DNA Replication Termination Factors
MRN complex
103494994
DNA repair and recombination proteins [BR:
cmo03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
MRN(MRX) complex
103494994
BRCA1-C complex
103494994
NHEJ (non-homologous end-joining)
MRX complex
103494994
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Mre11_DNA_bind
Metallophos
TAF1D
BFN_dom
Motif
Other DBs
NCBI-GeneID:
103494994
NCBI-ProteinID:
XP_050939267
LinkDB
All DBs
Position
4:complement(8676891..8685692)
Genome browser
AA seq
718 aa
AA seq
DB search
MGELSREEMKNTLRVLVATDCHLGYLEKDEIRRHDSFKAFEEICSIAEQKQVDFLLLGGD
LFHENKPSRSTLVKAIEILRRHCLNDKPVQFQVVSDQTINFPNTFGHVNYEDPHFNVGLP
VFSIHGNHDDPAGVDNLSAVDILSACNLVNYFGKMVLGGSGVGQITLCPILIRKGSTSVA
LYGLGNIRDERLNRMFQTPHAVQWMRPEAQEGCQVTDWFNILVLHQNRVKANPKNAINEH
FLPRFLDFIVWGHEHECLVDPLEVPGMGFHITQPGSSVATSLIDGESKPKHVLLLEIKGN
QYRPTKIPLTSVRPFEYTEIVLKDEPDIDSNDQNSIIEHLDKVVQNLIEKSSKRVVNRSE
LKLPLVRIKVDYSGFMTINPQRFGQKYVGKVANPQDILIFSKASRKGRNEVKIDDSERLR
PEELNQQNIEALVAENNLKMEILPVNDLDVALHNFVNKDDKMAFYSCVQYNLEETRNKIA
HDADSLKFEEEDLILKVGECLEDRVKERNIHSKNDTVFTSSIQFSKDFGSKSSTAVGSAV
SFSDDEDTVKASGSKSTRGRKVSSSAAEDTSTKTSTRGRGRGRGRGSSSSLKQTTLDAAL
GFRQSQRSATAAVQSTVNTDAMNSASSGEPRENEVEEINDSSENDESLPSKGRKRTAPRG
RGRGSTQSKRGRKSDNSLVKRTFVGRDNGDDSEDEDNARKLLNKSQPRVTRNYGALRR
NT seq
2157 nt
NT seq
+upstream
nt +downstream
nt
atgggggagttgtctcgggaggagatgaaaaatacacttcgagtacttgtcgcaacagat
tgtcatctgggctatttggagaaggatgagatcaggcgacatgattcattcaaggcattt
gaagagatatgctcaattgcagaacaaaagcaggtggactttttacttcttggcggtgac
cttttccatgagaacaagccatcacgatccacattagtgaaggcaatagagatcctgcgg
cgtcattgccttaatgataaaccggtgcagttccaagttgttagcgaccaaaccatcaat
tttccaaacacatttggccatgtcaactacgaagatcctcattttaatgttggtttacca
gtattcagtattcatggaaaccatgacgatcctgctggagtggacaacctttctgccgtt
gatattctctctgcatgcaatcttgtgaactacttcgggaaaatggttcttggtggttct
ggtgtcggtcagatcacgctctgccccattcttatcagaaagggttcaacatctgtagct
ctttatggtctcggaaatattagagatgaaaggctgaacaggatgttccagacaccacat
gctgttcagtggatgcggccagaagcacaggaaggctgtcaagtgacagactggttcaat
attctggtacttcatcaaaacagagtcaaggcaaatcctaaaaatgcaataaatgagcat
tttttacctcgcttcctggacttcattgtttggggacatgaacacgaatgtttggttgac
cctctggaagttcctgggatggggtttcacatcacacaaccaggttcctcagttgcaaca
tcactgattgatggtgaatcaaaaccaaaacatgttcttttgttggaaattaagggtaat
caatatcggccaaccaagataccgttgacgtctgtaaggccatttgagtacacagagatt
gtattgaaggacgaacctgacatcgactctaatgatcaaaactcaattatcgaacacttg
gacaaagtggttcaaaatttgattgagaaatctagcaaaagggttgtaaacagatcagag
ctcaagcttccattagttcgcataaaggtggattattctgggtttatgacaataaatcct
caaagatttggtcagaaatatgttgggaaggtagcaaatcctcaagacatccttatattc
tcaaaagcttcaaggaaaggccgcaatgaagtgaaaatagacgattcagaaaggcttcgt
ccagaagaactgaatcaacaaaatatagaggctttagttgctgaaaataatctgaaaatg
gagatccttcctgtcaatgatttggatgttgcgttgcacaattttgtaaataaagatgac
aaaatggcattttattcctgcgtgcaatacaatctagaagaaacacgaaataaaattgct
catgatgcggattctttgaagtttgaagaagaagatttaattcttaaagttggcgagtgc
ttggaggatcgagtcaaagagaggaacatccattccaagaatgatacggtattcacatca
tcaattcagttttcaaaagatttcggtagtaaaagttccacggcagttgggtctgccgtt
tcttttagtgatgacgaggatacagtaaaagcgtctggatcaaaatccactagaggtcgt
aaagtatcatctagtgcagctgaagacacttcaactaaaacttccacacgaggaagagga
aggggtagagggaggggcagcagcagtagccttaagcagacaactcttgatgcagctctt
ggatttcgccaatcacaaagatctgccactgctgctgttcaaagcacagtcaacacagat
gctatgaattctgcttctagtggagaaccaagggaaaatgaagttgaagaaattaacgac
agttcggaaaatgatgaaagtcttcccagcaaaggaagaaagcgcactgctccgaggggt
agagggagaggatccactcaatctaaacggggaaggaaatctgacaactctttagttaag
cgaacgttcgtaggtagagataacggcgatgacagtgaagatgaagacaacgctagaaag
ctattaaataagtctcagcctcgggtgacaagaaattatggtgcactgagaaggtaa
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