Cucumis melo (muskmelon): 103495147
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Entry
103495147 CDS
T03195
Name
(RefSeq) DEAD-box ATP-dependent RNA helicase 18
KO
K14809
ATP-dependent RNA helicase DDX55/SPB4 [EC:
5.6.2.7
]
Organism
cmo
Cucumis melo (muskmelon)
Brite
KEGG Orthology (KO) [BR:
cmo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
cmo03009
]
103495147
Enzymes [BR:
cmo01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
103495147
Ribosome biogenesis [BR:
cmo03009
]
Eukaryotic type
Pre-60S particles
Helicases
103495147
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Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
CTE_SPB4
ResIII
Motif
Other DBs
NCBI-GeneID:
103495147
NCBI-ProteinID:
XP_008454834
UniProt:
A0A1S3BZH6
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Position
10:16675601..16679795
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AA seq
587 aa
AA seq
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MDGDDVNRALTTTRFSDLQPPLSPPVIDALTQSGFQFCTPVQAATIPLLCSHKDVAVDAA
TGSGKTLAFVVPVVEILRRCSSRPKPHHVMGIIISPTRELSSQIYEVARPFVSTLSNFKA
VLLVGGADVKVDMKVIEEEGANLLIGTPGRLFDIMDRFENLDFRNFEVLILDEADRLLDM
GFQKQITSIISRLPKLRRTGLFSATQTEAVEELSKAGLRNPIRVEVKAETKPGSLSSTQL
ASSKTPSSLHIEYLECEADKKSTQLVDILIKNKSKKIIVYFMTCACVDYWGVVLPQLTDL
KGLFLIPLHGKMKQTAREKALASFVSLSSGVLLCTDVAARGLDIPGVDCIVQYDPPQDPN
VFVHRVGRTARLGREGNAIVFLLPKEEAYIEFLSIRRVPIQERIYCSDASDIVQQIRMAA
KRDRDVMEKGVKAFVSFIRAYKEHHCSFIFRWKELEIGKLAMGYGLLQLPLMPEVKHHSL
STEGFVPVEDINFGEVKYKDKSREKQRKKNLQAKKEAQKQLAKPEPKKTPNVAAPILRKK
TARQRRATQTAEDEDELAREYRLLKKLKKGTIDETEYAKLTGTEELL
NT seq
1764 nt
NT seq
+upstream
nt +downstream
nt
atggacggggacgatgttaaccgagccttaaccaccacacgcttctccgatctccaacct
cccctctctccacctgttatcgatgcgttgactcaatctggttttcaattctgtactcca
gtccaagccgccacaattccgttgctatgcagccacaaggacgtcgccgttgatgccgcc
actggttccggaaaaacccttgcgtttgtagtaccggttgtcgaaatcctccgccgatgt
tctagtcgccccaagcctcaccatgtaatgggtattataatttcgccaacgagggagctt
tcctcacaaatttacgaggttgctcgtcctttcgtttctactttgtcgaatttcaaagcg
gttctactcgttggaggagctgatgtgaaagtagacatgaaggttatagaagaagaaggt
gccaacttgttgattgggactccaggaaggttatttgatataatggatcgtttcgagaac
ttggatttccggaactttgaggttctgatattggatgaggcagataggctcctggacatg
ggattccagaagcagataacttcaattatatctcgtttgcctaagcttcgtaggactggt
ctcttttcggctacacaaactgaggcagttgaagagctttcaaaagcagggctaagaaat
cctatcagggtcgaagtaaaggcggaaacaaagcctggttcattgtcatcaacacaactt
gcctcttcaaagactccatccagtcttcatattgagtatttggaatgtgaagcagacaag
aagtccacccaacttgtcgatattcttattaagaacaaatctaaaaaaatcatagtttac
ttcatgacttgtgcatgtgttgactactggggagttgttctgcctcagcttactgatttg
aaaggtttattcttgatccctctgcatgggaaaatgaaacagactgccagggagaaagca
ctagcctcatttgtatccctttcaagtggtgttcttctatgcacagatgttgcagcccgt
ggactcgacattcctggtgttgattgtatagttcagtatgatcctcctcaagatcctaat
gtctttgtacatagagttggtcggactgctcgattgggtagagaaggaaatgccattgtt
tttcttttgccgaaggaagaagcttatatagaatttctttccataagaagggttcctata
caagagagaatttattgtagtgatgcatctgacatagttcaacagatacgaatggcagca
aaaagggatcgtgatgtcatggagaagggcgttaaggcatttgtttcttttatacgtgct
tataaagaacaccactgctctttcattttcaggtggaaagaacttgaaatagggaagttg
gccatgggttatggtctgttgcagctgcctttgatgcctgaggtgaagcaccactcgctt
tcgactgagggttttgttccagttgaagatattaactttggggaggtcaaatacaaagac
aagtctcgggaaaaacaacggaagaaaaaccttcaagctaagaaggaagcacaaaagcaa
ctggcaaaacctgaacccaaaaagacccccaatgtcgcagctcccatcttgagaaagaaa
acagcccgacagagacgtgctacacagacagctgaagacgaggatgagttggcacgcgaa
tatcgattgttgaaaaagctcaaaaagggaaccattgatgaaaccgaatatgcaaaacta
actgggacagaggagctactatga
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