Cucumis melo (muskmelon): 103495394
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Entry
103495394 CDS
T03195
Name
(RefSeq) SWI/SNF complex component SNF12 homolog
KO
K11650
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D
Organism
cmo
Cucumis melo (muskmelon)
Pathway
cmo03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
cmo00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
103495394
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cmo03021
]
103495394
03036 Chromosome and associated proteins [BR:
cmo03036
]
103495394
Transcription machinery [BR:
cmo03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
103495394
Chromosome and associated proteins [BR:
cmo03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
103495394
PBAF complex
103495394
GBAF(ncBAF) complex
103495394
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SWIB
DUF4785_1st
DUF881
Motif
Other DBs
NCBI-GeneID:
103495394
NCBI-ProteinID:
XP_008455155
UniProt:
A0A1S3BZU6
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Position
1:1568431..1572556
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AA seq
561 aa
AA seq
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MSVNNNSVNSNSAVRNVGATISVNNSSSSNNLGRNVVAPHFGNSGMVPQTRPLNHHGHLL
SQPQPQIHSGSHFSGHFQLSEPQTRTMSHVQYTQAHAQAQAQSAHAHFQAHTQPVQLHSA
NAGSTPSISTPGTGNSKRPTQKPPSRSAGNSYTIATSPFKTMELTPAPRRKKVKLPEKQI
PDKVAALLPESAIYTKLLEVEGRIDAALARKKNDIQESLKNPPRVQKTLRIYVFNTFENQ
NQSGSDQKNVESPSWSLKITGRILEDGQDPVITGAMQNYDSTYPKFSSFFKKITVYLDQS
LYPDNHTILWEAARSPALQEGFEVKRKGDKEFTAVIRLDMNHTPEKFRLSPSLSDVLGIE
TDTRSRIMAALWHYVKANKLQNSSDPSFITCDPGLRKVFGEEKVKFSMVSQKISQHLIPP
QPINLQHRVKISGNSPVGTTCYDVMVDVPFPIEKQMSAFLANLEKPKDIDSCDELISAAV
KKIHEHSRRRSFFLGFSQSPADFINNLISSQTKDLKIVAGDASHHAEKERHSNFYSQSWV
EDAVIRYLNRKPATSEVPRSA
NT seq
1686 nt
NT seq
+upstream
nt +downstream
nt
atgtcggtaaataacaacagtgttaatagcaacagtgcggtgaggaatgttggggcaact
atttcggtgaataatagctctagtagtaacaatttagggaggaatgttgtggccccgcat
tttgggaattcaggcatggttccgcaaacaaggccactgaaccatcatggccatctactc
tctcagccacagcctcaaatacatagcggatcacatttttcaggtcattttcagctgtct
gagccgcagacacgtacaatgtctcatgtacagtacacgcaggctcatgctcaggcacaa
gctcaatctgctcatgcacattttcaagctcatactcaacctgttcagctgcatagtgcc
aatgctgggtcaacaccctctatttcaactcctggaacggggaattctaagaggcccact
cagaagccaccttctaggtctgcagggaattcttacactattgctacttcaccatttaaa
accatggagctgactccagcccctagaagaaagaaggttaagcttcctgagaaacaaata
cctgataaagttgcggctcttctgccagaatctgctatctataccaaattactcgaagtt
gaaggtcgtatagatgctgctctagcaagaaagaaaaatgatattcaagagtctttaaag
aaccctccacgcgttcaaaaaaccctacggatatatgtcttcaatacatttgaaaatcag
aatcaaagtggttctgatcagaaaaacgtagaatccccttcatggtcgcttaagataact
gggaggatcttggaagatggacaagatcctgttatcactggagccatgcaaaattatgat
tctacatacccaaaattttcatctttcttcaagaaaattactgtatacttagatcaaagc
ctttatccagataaccatacaattttatgggaggctgcccgttctcctgctttgcaagag
ggctttgaagtgaagagaaaaggggataaagaatttactgcagtgataagattggacatg
aatcacacccccgaaaagtttcgtctttcgccttctctgtcagatgtgcttggaattgaa
acagacacccgctcaagaattatggctgcactatggcattacgtgaaagctaacaagttg
cagaattcaagcgatccttctttcattacatgtgatccaggtcttagaaaagtgttcggt
gaagagaaggtgaaattttctatggtctctcagaagatatcacaacatttaattcctccc
cagcctataaacttacaacatagagttaagatttcgggaaattcacctgttggaactaca
tgttatgatgtcatggtcgacgtgccttttccaatagagaaacaaatgtctgcgttctta
gcaaaccttgagaagcctaaagatatagattcctgtgatgaattgatttctgctgcagta
aagaagatacatgagcactctcgaaggcgatctttctttcttggcttcagtcagtctcca
gcagattttatcaataacttgatatcttctcaaactaaggatttaaagatcgtagctgga
gatgctagccatcatgcagagaaagaacgtcactctaatttctacagtcaatcatgggtg
gaggatgctgtcattcggtatctaaaccgtaaacctgcaacaagtgaagttcctagaagc
gcataa
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