Cucumis melo (muskmelon): 103495570
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Entry
103495570 CDS
T03195
Name
(RefSeq) ERAD-associated E3 ubiquitin-protein ligase HRD1B-like
KO
K10601
E3 ubiquitin-protein ligase synoviolin [EC:
2.3.2.27
]
Organism
cmo
Cucumis melo (muskmelon)
Pathway
cmo04120
Ubiquitin mediated proteolysis
cmo04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
cmo00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
103495570
04120 Ubiquitin mediated proteolysis
103495570
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
cmo04121
]
103495570
Enzymes [BR:
cmo01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
103495570
Ubiquitin system [BR:
cmo04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
103495570
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_2
zf-rbx1
zf-C3HC4
zf-RING_UBOX
zf-C3HC4_2
zf-C3HC4_3
zf-ANAPC11
zf-RING_11
zf-RING_16
FlxA
zf-RING_5
Motif
Other DBs
NCBI-GeneID:
103495570
NCBI-ProteinID:
XP_008455400
UniProt:
A0A1S4E231
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All DBs
Position
5:complement(27668056..27676622)
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AA seq
558 aa
AA seq
DB search
MMKLQTYAGISFIATIMVIYHAFNSRGQFYPALVYLSTSKINLVLLLNMGLVIMCILWQL
TKKIFLGSLREAEVERLNEQSWKELMEILFAITIFRQDFSVAFLGMVTALLLIKALHWLA
QKRVEYMETTPSVPLLSHIRIVSFLGFLFVLDSLFFYNSIDSLIQTRKASVSLFFSFEYM
ILATTAVSTFVKYIFYVSDVLMEGQWERKPVYTFYLELIRDLLHLSMYLCFFLVIFMTYG
VPLHLIRELYEIFRNFRIRIADYIRYRKITSNMNDRFPDATPEELNSSDATCIICREEMT
VAKKLVCGHLFHVHCLRSWLERQHTCPTCRALVVPPEGSSTTSGHHGVQSDANQQGTGTT
SSSAQGTSGTGVTNDNLSHHQARVRAAAAAASIYEKSYVYPCASTLVWSLGYAVVPQVER
PLFDSNNTETNGEQSPNGHPQYFSFPGGPSNLSFTQFPQNIFVPFQPREGTGNNIEELGS
SLNVSGSQLEAQEKFLQQQIEFLQNQLQLLRKPKVEESSRGASETDKKGKSLAISPAPSA
SLSSSDSHPPGETERVVR
NT seq
1677 nt
NT seq
+upstream
nt +downstream
nt
atgatgaagctgcaaacatatgcggggattagttttattgcaaccataatggttatctat
catgccttcaacagtagagggcagttctacccagcattggtctatttatcgacctccaag
ataaatctagtacttcttctcaatatgggtttagtcatcatgtgcattttgtggcagcta
acaaaaaaaatatttctgggttctcttagagaagcagaagttgagaggctcaacgagcaa
tcatggaaggagttgatggaaatcctatttgccatcactatttttcggcaagatttttct
gttgcattcctgggtatggtcacggctctgttgttgatcaaagctctccattggctggct
cagaagagagttgaatacatggaaaccactccatcggtgccattgttgtctcatatccgg
attgtttctttcttaggcttcctctttgttctcgatagtctgtttttttataactcgata
gattctctgatacagacaaggaaggcctcggtttccctcttcttttcatttgagtatatg
attcttgcgacaacagctgtgtcaacgtttgtgaaatatatcttctatgtcagtgatgtg
ctcatggagggacaatgggaaaggaaaccagtctatacattttacttggaacttattcga
gacttacttcacttgtcgatgtacttgtgtttctttcttgtgattttcatgacttatggt
gtgcctttgcacttgatccgagagctttatgagatctttaggaatttcaggattcgcatt
gcagattacatccgttatagaaagattacttcaaacatgaatgatcgttttcctgatgca
acgcctgaagaactcaattcaagtgatgcaacatgcattatttgtcgtgaagagatgaca
gttgcaaagaaactagtatgtggacatctttttcatgtccattgtctccgatcttggttg
gagcgacaacatacttgtcccacttgtagagcccttgttgtaccacccgaaggttcaagt
acaacaagcggtcatcatggagtgcagtctgatgctaaccaacaaggaacaggaaccaca
agttcatctgcacaaggtacaagtggcacaggcgttactaacgataatttaagtcatcat
caggctagagttcgagctgctgccgctgctgcttcaatatatgagaaatcgtatgtttat
ccttgtgcgagcacattagtatggtctcttggatatgcagtagttcctcaagttgaaaga
cctttgtttgactctaacaatacagaaacaaatggagagcaatctcccaatggacatcca
cagtacttttcatttcctggcggcccttcaaacctgtccttcactcaatttccccaaaat
atctttgttccttttcagccacgagagggcactggaaacaatatagaggaattggggagt
agtctaaatgtatcaggctcacagcttgaagctcaagaaaaatttcttcaacaacagatt
gagttccttcagaatcaactgcaacttctccgtaaaccaaaagttgaggaaagctcaaga
ggagctagcgagacagataagaaagggaaaagtttagctatctcaccagcgccatcggcg
tcattgtcttcatcagattctcatccacctggagaaacggaaagggtggtaagatag
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