Cucumis melo (muskmelon): 103495880
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Entry
103495880 CDS
T03195
Name
(RefSeq) transcription initiation factor IIB-2
KO
K03124
transcription initiation factor TFIIB
Organism
cmo
Cucumis melo (muskmelon)
Pathway
cmo03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
cmo00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
103495880
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cmo03021
]
103495880
Transcription machinery [BR:
cmo03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIB
103495880
Prokaryotic type
Archaeal type
TFB
103495880
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TFIIB
Zn_Ribbon_TF
Cyclin_N
Ribosomal_S27e
zf_Tbcl_2
DUF7573
Zn_ribbon_8
Motif
Other DBs
NCBI-GeneID:
103495880
NCBI-ProteinID:
XP_008455781
UniProt:
A0A1S3C1T7
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All DBs
Position
8:complement(13644395..13651071)
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AA seq
312 aa
AA seq
DB search
MSDAFCSDCKRQTEVVFDHSAGDTVCSECGLVLESHSIDETSEWRTFANESGDNDPVRVG
GPTNPLLADGGLSTVIAKPNGTTGEFLSSSLGRWQNRGSNPDRGLILAFKTIATMSDRLG
LVATIKDRANEIYKRVEDQKSSRGRNQDALLAACLYIACRQEDKPRTVKEICSVANGATK
KEIGRAKEYIVKQLGLETGQSVEMGTIHAGDFMRRFCSNLGMNNQAVKAAQEAVQKSEEF
DIRRSPISIAAAVIYIITQLSDDKKPLKDISVATGVAEGTIRNSYKDLYPHVSKILPGWY
AKEEDLKNLCSP
NT seq
939 nt
NT seq
+upstream
nt +downstream
nt
atgtctgatgcgttctgctctgactgcaagcgtcagactgaggttgtttttgaccattcc
gccggagatacggtgtgttccgagtgtggtcttgtccttgaatcccactccatcgatgag
acctccgagtggaggacttttgccaatgagtctggggataacgacccggttcgtgttggt
ggacccacaaatcctcttttggctgatggtggactttccacggtgattgcgaagcctaat
ggtaccactggggagttcttgtcctcgtctttgggtcggtggcagaatcgtggctccaat
ccagatcgagggttgattcttgctttcaagaccattgctactatgtctgataggttgggc
cttgttgcaaccataaaggatcgggccaatgagatatataaaagagtagaagatcaaaaa
tctagtagaggaagaaatcaagatgctttattggctgcttgcttatatattgcttgtcga
caagaagataaaccccgcacagtcaaggaaatttgctctgttgccaatggggcaacaaag
aaggagattgggcgagcaaaagaatacattgtgaaacagttggggttggagacgggtcag
tctgtagagatgggaacaattcatgctggagactttatgaggcgtttttgttcaaatctt
gggatgaataatcaagctgttaaagctgcccaagaagctgtacagaaatctgaagagttt
gatattaggagaagcccaatttccattgcagcagcagttatttatattattactcagctt
tcagatgataagaagcctctgaaagatatatcggtagctaccggtgttgcggaaggaaca
atcagaaattcatataaagatctctatccacatgtgtcgaagatattaccgggttggtat
gctaaagaggaggatcttaagaacctctgcagtccttaa
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