Cucumis melo (muskmelon): 103496328
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Entry
103496328 CDS
T03195
Name
(RefSeq) transcription initiation factor TFIID subunit 2
KO
K03128
transcription initiation factor TFIID subunit 2
Organism
cmo
Cucumis melo (muskmelon)
Pathway
cmo03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
cmo00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
103496328
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
cmo01002
]
103496328
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cmo03021
]
103496328
03036 Chromosome and associated proteins [BR:
cmo03036
]
103496328
Peptidases and inhibitors [BR:
cmo01002
]
Metallo peptidases
Family M1
103496328
Transcription machinery [BR:
cmo03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
103496328
Coactivators
SAGA/TFTC/STAGA complex
103496328
Chromosome and associated proteins [BR:
cmo03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
TFTC complex
103496328
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peptidase_M1
HEAT_2
Peptidase_M1_N
Motif
Other DBs
NCBI-GeneID:
103496328
NCBI-ProteinID:
XP_008456406
UniProt:
A0A1S3C357
LinkDB
All DBs
Position
12:complement(27457271..27479063)
Genome browser
AA seq
1361 aa
AA seq
DB search
MAKPRKPKNTDDAKPPDNSGAVVRHQKLCLSIDIDNRRVYGFTELEIAVPDIGIVGLHAE
NLGILSVSVDGDPTEFEYYPRPQHVESERSFKAVASPSSAADAAGSIYMSSIEKELVPNL
LINCCKAFKSGSEQQDQPFLENGVQPADEDKQNVRLVRIDYWVEKSEVGIHFYNRLAHTD
NQIRRARCWFPCMDDGLQRCKYDLEFTVSQNLVAVSNGILLYQVLSKDNPPRKTYVYRVD
IPVNARWISLAVGPFEILADHQNVLISHMCSPVNSLKLKHTVDFFHGAFSCYKDYLSVDF
PFGSYKQIFIEPEIAVSSACLGVSMCIFSSHLLFDEKIIDQTIDTRIKLAYALARQWFGI
YITPEAPNDEWLLDGLAGFLTDLFIKKNLGNNEARYQRYKANCAVCRADDSGLTTLSSSA
ACKDLHGTQCIGIYGKIRSWKSVAILQMLEKQMGPESFRKILQNIVSHAKDTGSASQLLS
TKEFRQLANKIGNLERPFLKEFFPRWVESCGCPLLRMGFSYNKRKNMVEMAVSRECTATP
ATSVENRDSDAGWPGMMSIRIYELDGVFDHPVLPMTGESWQLLEIQCHSKLAARRLQKTK
KGSKPDGSDDNADIPALDIRSSVESPLLWLRADPEMEYLAEIHFHQPVQMWINQLEKDKD
VIAQAQAIATLEMLPQPSFSIVNALNNFLRDPKAFWRVRIEAALAMAKTASEDTDWAGLL
NLIKFFKSQRFDADTGLPKPNEFRDFPEYFVLEAIPHAVAMVRGTDQKSPREAVEFVLQL
LKYNDNNGNPYSDVFWLAALVQSVGELEFGQQSILFLASLLKRIDRLLQFDRLMPSYNGI
LTISCIRTLTQIALKLSGLLSLDRIIELIRPFRDFNSIWQVRIEATRSLLDLEYHCNGID
ATLLLFIKYLEEENSLRGQAKLAVHVMRLCQIMRRSGSNDVVNNDTLVALLLLLEGNMAF
NNVCLRHYLFCILQVLAGRPPTLYGVPREYKTLHMGDTGTCSEQKRMLTSLIPEFNPPEQ
SSVSAVAPMPCIPASLSSEPLHAPTPRPDSLAVPELSKEGGEIAEVPKQAMAIVEAPREA
ASVSSSHERKLPVVKIKVRSSAATSRADADNLTTERSHAVPRETDVGPSSSVSVDAPPRN
IAEATSISNRILEEVNSCHDHGSHMTASIGSAKLASYGDELGKEFQCTADSSSRAFGHFQ
PEDPSSSSIIQDNNIDADAQKYASLQTLSLPQNDHGLASSHSRHGKKEKKKDKEKKRKRE
SHKEHRNDPEYIERKRLKKEKKQKEKEMAKLLNEEVKPQPLAMPRIKEPPTKSTPMQLET
NEPSGSRLIIGVQSKPEASEGTTSAAPKLRIKFKNRTLNNS
NT seq
4086 nt
NT seq
+upstream
nt +downstream
nt
atggccaagcctcgcaagcccaaaaacaccgacgacgccaagccacctgataactccgga
gctgtagttcgtcaccagaagctctgtctttccatcgacattgataatcgtcgcgtttat
gggttcaccgagttggaaattgcggttcctgatattggtatagttgggttgcacgcggag
aatcttgggattttgagtgtttcagtggatggtgacccaactgaatttgagtattatccg
cggcctcagcatgtggaaagtgagaggagttttaaagcagttgcgtcgccgagctctgct
gcagatgctgcagggtcaatttatatgtcttcaatcgagaaggaattggttcctaatttg
ttgataaactgctgcaaggctttcaagagtggaagcgagcagcaagaccagccatttctg
gagaatggagtgcaacctgcggacgaggacaagcagaatgtaaggctggttcgtattgat
tactgggtagagaaatcagaggtaggtattcacttctataatcgtctggctcacactgac
aaccaaataaggcgtgcaaggtgctggttcccttgtatggatgatggtctacaacgatgc
aagtatgacctcgagtttactgtctctcaaaatcttgtggctgtcagtaatggaattttg
ttgtaccaggtcttgagcaaagacaatcctccccgcaaaacttatgtgtatagggtagac
atccctgtcaatgcacgttggatatcacttgccgttggaccatttgaaatccttgctgat
caccaaaatgtactgatatcacacatgtgctcgcctgttaattctttaaagctcaagcat
acggtggatttttttcatggtgcattcagctgctataaggattacctctcggtggacttc
ccatttgggtcatataaacaaatcttcatagagccggagattgcagtatcatcagcatgt
ttgggagtttccatgtgtatatttagttctcatcttttgtttgatgagaaaatcattgat
cagaccattgatacgaggattaaacttgcttatgctctggcaagacagtggtttggcatt
tatattacacctgaagccccaaatgatgagtggttgttggatggtcttgctggttttttg
actgatttatttattaagaagaacttgggaaataatgaggcacgctaccagagatacaag
gcaaattgtgctgtttgtagagcagatgatagtggtttgaccaccttgagttcctccgct
gcttgtaaagatttgcatgggacccaatgtattggtatatatggaaaaataagatcatgg
aagtctgtggcaatccttcaaatgttggaaaagcagatggggcctgaatctttccgcaag
attctacaaaatattgtttctcatgctaaagatactggttctgcgtcacaattactcagc
acgaaagagtttcgtcaattagccaataagattggaaacctagagcgaccatttcttaaa
gagttctttcctcgatgggttgaatcttgtggttgtccactgctgaggatggggttttcc
tacaacaagcggaaaaatatggttgaaatggcggtttcacgggaatgcacagctacacca
gccacaagtgtagaaaatcgggacagtgatgctggatggcctggcatgatgagtatcagg
atttatgaacttgatggtgtctttgatcatccagttcttccaatgactggagagtcttgg
caactactagaaatacaatgccactccaaacttgctgctaggcgcctccagaaaactaaa
aaagggtcaaaacctgatggttctgacgacaatgctgatatacctgcactcgacattcgc
tctagtgtggaatctcctttgttatggttgagagcagaccctgagatggaataccttgct
gaaattcattttcatcagcctgttcagatgtggatcaatcaattagagaaggacaaggat
gtcattgcccaagcacaagcaattgcgacattagagatgttgcctcaaccgtctttttct
attgttaatgctcttaacaatttcctaagagaccccaaggccttctggagagtaagaatt
gaagcagcattggcaatggccaaaacagcctcagaggatactgattgggctggtttgctt
aatttgattaaattttttaaaagtcagaggtttgatgctgatactggactccccaagcca
aatgaatttcgtgattttcctgaatattttgttcttgaggccattcctcatgctgttgct
atggtcaggggcaccgaccaaaaaagccctagagaagccgttgagtttgttttgcaactt
ttgaagtacaatgacaacaatgggaatccttactctgatgttttctggttggctgcacta
gtccagtcagttggtgagcttgaatttggacaacagagcattctctttttagcatcgctt
cttaaaaggattgatagacttctgcagtttgacaggctgatgcctagctataatgggata
ttgactattagctgcatcagaaccttgacccagattgcactgaaactatctggacttctc
tctcttgatcgtatcatcgaactgataagaccttttcgagattttaattccatatggcaa
gttcgaattgaggcaacccgatcacttctcgatcttgagtaccactgcaacggaattgat
gcaacattgttattgtttattaaatatctagaagaagagaattccttgcgagggcaagcg
aagctggcggtccatgttatgcgtttatgtcagataatgagaagatctggttcaaatgat
gtagtcaataatgacacccttgttgctttgctcctcctattggaaggcaatatggcgttt
aacaatgtctgtcttcgtcactacttgttctgtattttacaagtccttgcagggaggccc
ccaacactttatggagttccaagagaatataaaacattgcatatgggagacacgggaact
tgcagtgaacagaaaaggatgttaacttctctcattcctgaattcaatccgccagagcaa
tcatcagtctctgcagttgcgcctatgccatgtattccagcaagtctttcatcagagccg
cttcatgctcccactccgaggcctgacagcttggcagttcccgagctttccaaggaagga
ggagaaattgcagaggttcctaagcaagctatggcaatagtagaagctccgagagaagca
gcctctgtttccagtagtcatgagaggaagttgccagtcgttaagatcaaagtcagatca
tctgctgctacaagtagagcagatgccgataatctaaccactgaaagatcgcatgctgtg
cctcgtgaaacagatgttggtcctagtagttctgtttctgttgatgcacccccaagaaat
attgctgaggctacaagtatcagcaaccgtattctggaggaggtaaactcctgtcatgat
cacgggtctcatatgacagccagcattggcagtgcaaaacttgcaagttatggtgatgaa
cttgggaaggaattccagtgcactgctgattccagcagtcgagcttttggacattttcag
ccagaagatccttcatcatcgagcatcatacaagataacaatattgatgctgatgcacag
aagtatgcaagtcttcagacgctttctttaccacagaatgatcatggcttagcctcttcg
cactctcgccatgggaaaaaggaaaagaagaaagataaagaaaagaaacgtaagcgagaa
agtcataaagaacatcgcaatgatcctgaatacatcgagcgcaagcgactaaagaaagag
aagaaacaaaaagaaaaagagatggcaaagctattgaatgaagaggtgaagccacagcca
cttgcaatgcctcgtataaaagaaccaccaacgaagtcaactcccatgcaattggaaaca
aatgaacctagtggatcaagattaatcataggagttcaaagtaagccggaggcatcagaa
ggtacgacttctgctgcccccaaacttagaattaaatttaaaaaccgaacgttgaacaat
tcataa
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integrated database retrieval system
