Cucumis melo (muskmelon): 103496534
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Entry
103496534 CDS
T03195
Name
(RefSeq) uncharacterized protein LOC103496534 isoform X2
KO
K14404
cleavage and polyadenylation specificity factor subunit 4
Organism
cmo
Cucumis melo (muskmelon)
Pathway
cmo03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
cmo00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
103496534
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cmo03021
]
103496534
03019 Messenger RNA biogenesis [BR:
cmo03019
]
103496534
Transcription machinery [BR:
cmo03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
103496534
Messenger RNA biogenesis [BR:
cmo03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
103496534
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NUFIP1
FKBP15
Motif
Other DBs
NCBI-GeneID:
103496534
NCBI-ProteinID:
XP_008456637
UniProt:
A0A1S3C3B2
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All DBs
Position
3:22053474..22059072
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AA seq
599 aa
AA seq
DB search
MIRPPVPSSQQVPNSSLANSGNGFQNQAPFCNPNPHFNNLPGNPVPTMPPPMFQPGLMMN
LQNPLMGLPNNPLGASPFAPGHMGFANSASNFPAQGQFNLMPNVNQMNMNSCLPLAQFFG
QNMPNLVQQLGQNMGLNNGQFCLPFQNMNQHVIPGQMMNMSQVPSHTSYGGPNQQAVPMP
FQNPGFSTAQPFGVNQGMHPVNQNPQNFIPQAMGGAGSNQFPASVQPLQGNSTMPINSST
QPQQARNLQSPAFAGTQGNSSISDGGNGLNSISNNSAHRNFMRNSKKGFQKNQTHHMKNE
KKRFGFPGGQKEKGFHNERRNKFCGTNSTDQVKEQKRSLSLVYTDQEIRQWREARRKNYP
SSTNIQKKLTEKQTNCTLVNQEAQLLRQELKEILAKQAELGVEVAEIPPEYLSYSEKHDN
RKQRGGPSTLGEEADGASIEKEKSQNRLNKRGRLKKKNRPRKKGKFEKHLSNKPPLKKRE
PTLLQKLLKADVRKDKSQLLQALRFMVMNSFFKEWPNKPLKFPSVTVKENEGETNVVDET
PLSTGNFNLQETNNNSLVENNGTHDINSDNENDIEDSDNDEKLKGDGTQVLEEEGEIID
NT seq
1800 nt
NT seq
+upstream
nt +downstream
nt
atgattcgtcctcctgtcccttcttcacaacaggtacccaattcatctctcgcgaattcc
ggcaatgggtttcaaaatcaggcccccttctgcaatccaaacccccattttaacaatctc
cctggaaaccctgttcccaccatgccacctcccatgtttcagccgggattaatgatgaat
ttgcaaaaccctctcatggggttgcctaataatcctcttggtgcttccccttttgctcct
ggccatatgggttttgcaaattctgcttctaattttccagctcaggggcagttcaatttg
atgccgaatgtgaatcagatgaatatgaactcttgtttgcctctagcgcagttttttggg
cagaacatgccgaatttggttcagcaattgggtcagaatatgggtttaaataatgggcag
ttttgtttgccgtttcagaatatgaatcaacatgtaattcctggacagatgatgaatatg
tctcaagttccttctcatacttcatatggtggtccaaatcaacaagctgttccaatgcct
ttccagaatcctgggttctctacggcccagcctttcggtgtcaatcagggaatgcaccct
gttaaccagaatccccagaacttcattccacaagcaatgggcggtgctggatcaaatcaa
tttccggcttcggttcaaccgctacaagggaattcgaccatgccgattaactcttccact
caaccacaacaagctaggaacctgcagtcacctgctttcgctgggacacagggtaattct
tcaataagtgatggaggaaatggattgaattcaatttcgaataattcagctcacaggaat
ttcatgaggaactcaaaaaaaggatttcagaagaatcaaactcatcatatgaaaaatgag
aagaaaaggtttgggtttcctggcggacagaaagagaaaggttttcacaacgagaggagg
aacaaattttgtggcaccaactccacagatcaagtgaaagaacagaagagatctctctct
ttggtctacacggatcaagaaattcggcaatggcgcgaggcacgccggaagaattaccca
tcatcaaccaacatacagaagaaactcactgaaaagcaaaccaactgcacattggtcaat
caggaggctcagcttttgcgacaagaactgaaagagattttagcgaagcaggctgaatta
ggagtggaagttgccgaaataccaccagagtatctctcctactcagagaaacatgacaat
cgaaaacaacgtggaggtccatcgacattaggagaggaagccgatggggcctcaatagag
aaagaaaaatctcaaaacaggttaaacaagaggggaagattgaagaaaaagaatcgcccg
agaaagaagggaaaatttgagaagcatttgtcaaacaagccaccattaaagaaaagagaa
ccaacattattgcagaagctcttgaaagcagatgtgaggaaagacaaaagccagttgtta
caagctttgagattcatggtgatgaattctttcttcaaagaatggcccaataaacccttg
aagtttccttcagtgacggtcaaagaaaatgaaggtgagaccaatgtggttgacgagacc
cctctgtctactgggaatttcaatctccaagagaccaacaacaattcattggttgaaaac
aatggtactcatgacatcaacagtgataacgaaaatgacattgaagacagcgacaacgac
gagaagctcaaaggagatggaacacaggtacttgaagaggaaggagaaattattgactaa
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