Cucumis melo (muskmelon): 103496815
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Entry
103496815 CDS
T03195
Name
(RefSeq) nibrin homolog isoform X1
KO
K10867
nibrin
Organism
cmo
Cucumis melo (muskmelon)
Pathway
cmo03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
cmo00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
103496815
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
cmo03032
]
103496815
03400 DNA repair and recombination proteins [BR:
cmo03400
]
103496815
DNA replication proteins [BR:
cmo03032
]
Eukaryotic type
DNA Replication Termination Factors
MRN complex
103496815
DNA repair and recombination proteins [BR:
cmo03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
MRN(MRX) complex
103496815
BRCA1-C complex
103496815
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
FHA
SRF-TF
BRCT
Nbs1_C
Motif
Other DBs
NCBI-GeneID:
103496815
NCBI-ProteinID:
XP_008457036
UniProt:
A0A1S3C4N6
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Position
6:15752241..15769287
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AA seq
525 aa
AA seq
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MVWGFFPVDPLSGEEKFYIFAPGKYKVGRKGCDLTIAKDKGVSRIHAEILVDAMIPLNSH
NSHLSNICSKVRISDCSKYGTFVRRNSGLKEKLHELSKKEASLCDGDVVSFGSGNATYRF
SFVQLLFYVNRSESFQSQLLRDKVSSIGACTSHDIQECTHVLVEELMPFNEALVDAIVAE
KPFVLTSWVELFAGKTTCNEIPSFDSYQPTMTVEGMHVKVVDPSTRKNCLSGYTFLLGLT
QMQYKYGDRLKMLLQQVGGANVLSIEDFSSDSQDLGNGENDRVVFVMPGGSVEKWDSSSK
VDSYYKITELILISSVLSGTLDRDNLIHPCEPGSSTCSTDETVVAESDLETETSKPVVSN
VQGPDEYLSKSDEYLSRSLVSVDNATTGSLGGHEIVKNSSSDIEMRKDKINESDNRNIDI
IFSQNLIVQHATKASTLVTAENSGITNFKRFRKTQTHSGNSFSNLVPFDKYPYKDNGDGR
EEIAESLKEERRRKETEAIAEDLFHNEKGRRRGMAGSLQELFTRS
NT seq
1578 nt
NT seq
+upstream
nt +downstream
nt
atggtttggggtttcttccccgtcgatcctctttcaggcgaggagaaattctacattttt
gcacctggaaagtataaagtgggtcgtaaaggctgcgatctgactatagcaaaagataaa
ggggtttcccgcatccatgcagaaatacttgtagacgctatgatccctttaaattcccac
aatagtcacttatctaacatttgctctaaagtgaggattagcgattgctccaaatatggg
acatttgttagaaggaattctgggttgaaggagaaacttcatgagctgtcgaaaaaagaa
gcaagcttgtgtgatggagatgtggtttcatttggatctggcaatgcaacctacaggttc
tcctttgtacaactcttgttttacgttaaccggtcagagtccttccaatcccaattgctt
agggacaaggtttcgtccatcggtgcttgtacttctcatgatattcaggagtgtacgcat
gtgcttgtagaggaactaatgccttttaatgaagctctagttgatgccatcgtggctgaa
aaaccttttgttcttactagttgggttgagttatttgcaggaaaaaccacctgcaatgag
attccatcctttgattcctatcaaccaacaatgactgtggaagggatgcatgtcaaagtt
gttgacccaagcactcgtaaaaactgtttgagtggatacacttttttactagggttgaca
cagatgcagtacaagtatggggatcggttgaagatgttattacaacaagttggtggtgcg
aatgttttgtcaatcgaggacttctcttctgatagccaagatttgggtaatggagaaaat
gatcgtgtagtattcgttatgcctggaggatcagttgaaaagtgggattcatcctctaag
gttgattcttattataaaataaccgagttgattttgatatcttctgttttgagtggaaca
ctagacagagacaatttgatacatccctgtgaacctggttcctctacatgctccactgat
gagaccgtggtagcagaatccgatcttgaaacagaaacaagtaaaccagttgtttctaat
gtccaagggccagatgaatatctaagcaaatcagatgaatatttaagtagatcactggtg
tctgttgacaatgctactactggatcattgggtggccatgaaatagtaaaaaatagtagc
agtgacatcgagatgagaaaagacaagatcaatgaatccgacaacagaaacatagacatt
atattcagtcaaaatttaattgtgcagcatgcgacgaaagcctccactttagtaactgca
gaaaacagtgggattacaaacttcaaacgattcagaaaaacacaaactcactctgggaat
agctttagcaatcttgtcccatttgataagtatccttacaaggataatggtgatgggagg
gaggaaattgctgagtccttgaaagaagaaagaaggcggaaggaaacagaagctatagca
gaagatttatttcataatgagaagggacggcgacgtggaatggcgggttctcttcaagag
ctttttactcgttcttaa
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