Cucumis melo (muskmelon): 103496945
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Entry
103496945 CDS
T03195
Name
(RefSeq) U3 small nucleolar RNA-associated protein 20
KO
K14772
U3 small nucleolar RNA-associated protein 20
Organism
cmo
Cucumis melo (muskmelon)
Brite
KEGG Orthology (KO) [BR:
cmo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
cmo03009
]
103496945
Ribosome biogenesis [BR:
cmo03009
]
Eukaryotic type
90S particles
U3 small nucleolar RNA-associated proteins
103496945
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UTP20_N
UTP20
UTP20_C
DUF7194
RYDR_ITPR
HEAT_EF3_N
Motif
Other DBs
NCBI-GeneID:
103496945
NCBI-ProteinID:
XP_050940397
LinkDB
All DBs
Position
5:9623749..9645771
Genome browser
AA seq
2678 aa
AA seq
DB search
MATASHAQAVKSLNKSPGRRRFVFQTFSQRVQEIDIDVYRSLDKVKSEPSEGSSFFRDCL
IEWRELNTAEDFISCYEEIIPLVQTLPLVILHKESIFSNLLSRVQIKARLSLEPILRLIA
ALARDLLEDFLPFLSQLADALVSLLEGGAAREPEIIEQIFTSWSYIMMYLQKYLTRNITD
LLRVTVSLRYYSKDYIQDFMAEATSFLLRNAPVDQLKNGIKRIILEVVKKPLATREYGTS
ALLFHTMRGTSSRFHSRAELVFRFLISGPTFEIGRDSSQGSDTILEVLKCVCQRLCEEMD
PKELEVIWKCLFEEITAAISTDYMVYINHLLMLLASVAQNLDWKKLHDYKPMLELVDLLV
MKFATTPSLPVDDDLSSIIDTILQLMLVILEGLKNSEDFLCISGCSLRWAPIFQLNNSSL
LIFVREVMEKDSRVLCAFRTNILRVMNELLESSPEEVIYLLLSFCERLPTEVLCTSEEEI
PRINSFILKILRQWIKEITDLLQCSSSTIDINESKLAIFWGVVRCCPYILKFQASSSLLV
ELINALDRLCTLEGDIFGIPKEKLESIIGATIGSYLKLLSSEKAGLEELSRLVYLAKRYS
SCSQVLVAVADYLDFIYGPALEADISKRIYSEEFQADKVEDAVQVFADNLRHSDKGVRLS
TLRILCHYEPLQSANLAKESSIDNEMEAENFALYSDDLVGSEVLRLLLSVESTSTSISTS
RKIILLISGVQKALLAERIPEAYLLVALNGIIGIFQNRFSYIWDQASECLASLIRKHSGF
VWDKLICYFQKWLCLLDQPGRDTSESSDELNDLVRCFRSFVVPSPDSTPLFTLLSLVLQS
LQKIPTIVESQSQRMLPLFLTFLGYSIGHVDSVDSFKQYACKSKEWKCVLKEWLNLLRKI
RNLKSFHKSDFLKEVLEQRLLDDNDAEIQSKVLDCLLMWKDDFLIPHEQHLKNMISPKTL
REELTRWSLSKEKNQIDESHRPKLVPLVTRLLMPKVRKLKVLGSRKQASVNLRKAVLQFI
AQLDTVELPLFFALLLKPLNIIPREADASANWFSNLHLVSMKASATNILKYFSTESIVAL
SWKKKYGFMHVVEEILAVFDEMLISPFLNVILGCVVRILASCTSSLHAARKNEASLSEIG
KTYNKNSLDMNKEAALPSLTCTAVKQHKDLRSLCLRVISFVLYKYEDFDFEMEFWDLFFT
SVKSSIESFKHEGSSSEKPSSLFSCFLAMSRSHKLVPLLARERNLVPDIFFILTISTASQ
PIILFVLQFIENLLTIDGELDGNDSAVRSILLPNLDSLIQSLHVLFQSGDAKKRKLVEHL
NGPMIRIFKLLSKLVRDQLHAKKFVEIILPCLSQAGRSSESHADTLQVVQNVVPLLGSES
TTKILKAVSPLLISVEQDLRLLVCDLINALAEVDSSILCVAQIIRGLNATSATEIGGLDF
DTIVNSYEKISVDFFCATPEEHALVVLSQCMHDMSSEELILRHSAYRCLLSFVEFSSSVL
GQGGISHQETIDNITLYDSSWSKESVMRLTNKFIFKHMGEAMNRETSVKKEWINLLREMV
LKFPDVANLSSLKALYSKDAEVDFFSNITHLQKLRRAKALIRFKNTIPTVNMPEVITKNV
FLSLFFNMLFDLQEGKAENIRVACIEALASISGQMEWKSYFALLRRCLRDITKHPDKKKV
LMRLICSILDNFHFQENISEVGSTQLYGSMVVMNNMQACLSKDVFPKIQKFMNSQSERVD
IYVHLAAVKLLKLLPENAMDSQLLSIIQHIVNFLKNRLESVRDEARSALAACLKELGSEY
LQVVVKVLRGSLKRGYEMHVLGYTLNFLLSKLFTGPATGKIDYLLDDLISVAEKDILGEV
AEEKEVEKLASKMKETRKQKSFETLKLVAQSITFKSHALKLLKPVTDHMKKHLTPKAKTK
LENMLSSVAAGFESNPSVNQTDLLIFNYGLIEDGIKVENGQGGISSLVDANKHSRDVSRG
KNFSCQTILAKAPCSHLIMVFALKLLHGYMKKMQLGKGDAQLLAMLDPFVPLLGDCLTSK
YEDVLSLTLRCLTLLLRLPLPSVKSQADKIKGVVLLIAQSSVDPCNPLVESCLRLLTVLL
RNEKVTLSTDQLHLLIQFPLFVDIDKNPSFVALSLLKAIVRRKLVVSEIYDLAIRVAELM
VTSQVEPIRKKCSKILLQFLLDYHLSEKRLQQHLHFLLSNLRYEHSTGREAVLEMLHATV
VKFSKSVVDSISETLFFHLVACLANDQDHHVRSMAGLVIKCLIDRISPGPQHNILESSLS
WYLEGKQQLWSVAAQVLGLLVEVEALKEAFERRIQTVLLVARGILQCVVDVTMNEQIDIS
AESTITFWKEAYYSLVMLEKLMHQFPQLFFENDFEDIWEMISHLLLYPHMWIRSISNRMI
ASYFRKIVIENSGRTSERSLGAYTLMKPSRLFFIATSFCCQLKSQLTDKDADLIEQNLVF
AIRGLHSVIGEVENVDSCPFWSTLEESEQRLFLKAFQLLDSEKGKSMLLPHMTGVFNQND
AGPEQIRRLLISNLIKQMGKVALQTDTIQMKAVFNVFRNISSQISVEDCERYVFEILLPL
YRVREGFSGKVIPESMVQLAQEVCDKIQNCLGIQKFVQVYSQIKKSLKTKRDKRKQEEKR
MAVINPMRNAKRKLRIAEKQRASKRRKITTMRMSRRML
NT seq
8037 nt
NT seq
+upstream
nt +downstream
nt
atggcgacggcttctcacgcacaagctgtcaagtctctcaacaagtcccctggtcgccga
cgttttgtcttccagacgttctcccagagagtacaagaaattgacattgacgtatacaga
agccttgataaagttaagtctgagccgtccgagggatcctccttctttcgagactgcctt
atagaatggagggaattaaatactgctgaggattttatttcttgttacgaggaaattatt
ccattggtacaaacattaccactggtgatactgcacaaggagtctatattctcaaatctt
ctttctagagtacagataaaagcaaggttatctcttgagcctatattgaggttgattgcg
gctttagcaagagatctgttggaggactttttgccatttctgtctcaattagctgatgca
ttggtgtctcttctagaaggtggtgcagctagggagccagaaattattgagcagattttt
acatcatggtcatatataatgatgtacttgcaaaaatatcttacacgaaatattaccgat
ttgctaagggttacagtgtccttgagatattactctaaagattacattcaagatttcatg
gccgaggcgacatcattcttgctaaggaatgcaccagttgatcagctaaaaaatggaatt
aaacggataatattggaagttgttaaaaaacctcttgctacaagagaatatggcactagt
gctctgctatttcacaccatgagaggaacctcatcaaggtttcattcaagagcagagctg
gtgtttcgctttttgattagtggtccaacatttgaaattggccgagactccagtcaaggt
tcagacaccattttagaagtgttaaagtgtgtgtgtcagagattatgcgaagaaatggat
cccaaggaattggaggtgatatggaaatgcttgtttgaggaaataacagctgccatttct
actgattacatggtttatataaatcacctgttgatgcttcttgcttcagtagctcagaat
ttggattggaaaaaacttcatgattataaaccaatgctcgaacttgtagacttacttgtg
atgaagtttgccacaactccaagccttccggtggatgatgatttatccagtatcattgat
acaattttgcagttaatgttagttatccttgaaggtcttaaaaattctgaggactttcta
tgtatttctggttgctcattgcgttgggctccaatatttcaattaaacaacagtagttta
ttaatttttgtacgagaagtaatggagaaggactctagggtactatgtgcattcagaact
aacattttaagagtgatgaatgaattgttagaatcttcacctgaagaagttatttatctt
ctgctttccttttgtgagagattaccaacagaagtgttatgtacatctgaagaggaaatt
ccaaggattaatagttttattctaaaaatccttcggcagtggattaaagagatcactgat
cttttgcaatgcagttcgtcaacgattgatattaatgaatctaaattggctattttttgg
ggtgttgttcgttgttgcccatatattttaaaatttcaagccagttcatccttactagtg
gagttgattaatgcacttgaccggctttgtactcttgaaggtgacatttttggaatccct
aaggaaaagttggaaagcataattggtgccaccataggttcttatcttaagttgctctct
agtgagaaggctgggcttgaagaattaagcagacttgtgtaccttgccaaaagatatagc
tcatgttcacaagtcttggtagctgtagctgattatttggattttatttatgggcccgca
ttggaagctgacatcagcaaaagaatctattctgaagagtttcaagcagacaaggttgag
gatgcagtacaggtgtttgcagataatttgcgtcactcagataaaggggttcgtttatct
actctcagaatattgtgtcactatgagcctttgcagtctgctaaccttgcaaaggaatct
tccattgataatgagatggaagctgaaaattttgcattgtattctgatgatttagtaggc
agtgaggtccttcgtctacttctctctgttgaatcgacatctacttcaatatctaccagc
cgaaagattatattattgatctctggagtgcagaaggccttgttggctgaaaggatacct
gaggcttacttattggttgctttaaatgggattattggcattttccaaaatcgctttagc
tatatttgggatcaagcatctgaatgtcttgcctctttaatcagaaaacactcgggattt
gtgtgggataaactgatctgttattttcagaagtggttatgtctacttgatcaaccaggc
agagatacttctgaatcatctgatgaattaaatgatctagtcagatgtttccgctcattc
gttgttccttcaccagacagtacaccactctttactctgttatccttggtgcttcaatca
ttacaaaagattccgaccattgttgaatctcagtctcaacggatgttgcctttgttctta
acatttttaggctacagcattggtcatgtggatagtgtggattcgttcaaacaatatgca
tgcaaaagcaaagagtggaaatgtgttctgaaggagtggttaaacttgctgaggaaaatc
cggaacctgaagtcttttcacaagagtgactttcttaaagaagttttggagcaaaggctt
ttggacgataatgatgctgaaatacaaagcaaggtccttgattgcctcttaatgtggaaa
gatgatttcttgatcccacatgaacaacatctaaaaaacatgatctcccccaagactttg
agagaagaacttacaaggtggagcttgtcaaaagaaaagaatcaaattgatgaaagtcac
agacctaagcttgtacctttagttactcgcttattgatgccaaaagttagaaaattgaag
gttcttggttcccgcaagcaagcgagtgtaaatcttcgaaaagccgtccttcagttcatt
gcacaacttgatacagtagagcttccacttttctttgctctgttattgaagcctttgaac
attattccaagggaagctgatgcaagtgctaactggttttctaacttgcacctagtttca
atgaaagcgtcggcaactaacatcttgaagtacttctcaacagaaagtatagtagcattg
tcatggaagaagaaatatggttttatgcatgttgttgaagaaattcttgctgtttttgat
gaaatgcttatcagtccatttctcaatgtaatattgggctgtgttgtccgaattttggca
agttgcacatcaagtcttcatgcggcaaggaaaaatgaagcgtctttatctgaaattgga
aagacatacaacaagaattcacttgatatgaataaagaagcagcactccccagtctgacc
tgtacagctgtgaagcagcacaaagatttaaggtctttatgtctcagagtcatttcattt
gttctttacaagtacgaggattttgattttgaaatggaattctgggacctattttttacg
tctgtgaaatcttcaatcgaaagtttcaagcatgagggctcaagcagtgaaaagccaagt
tcacttttctcttgctttcttgccatgagtagaagccacaaacttgtgccactgttggct
agagagaggaatctagttcctgatattttcttcatcctcactatctcgacagcatctcaa
cccatcatattgtttgtacttcagtttattgaaaacttgttgactattgatggtgagttg
gatggcaatgatagtgcggtgagaagcattttacttccgaatcttgattcccttattcaa
agcttgcatgttcttttccaaagtggtgatgcgaaaaagaggaaattggtagaacacctc
aatggaccaatgataagaattttcaaattactctcgaagctcgtaagggaccaattgcat
gctaagaagtttgtagaaatcatactcccatgcttatctcaggctggtcgtagttctgaa
tctcatgctgatactctgcaagtggtacaaaatgtggttccccttctagggagcgagagt
acaacaaaaatcttgaaagcagtttctccgttactgatttctgttgagcaagatctgcgt
ttgcttgtatgcgatcttatcaatgctcttgcagaagttgattcttccatcctctgtgtg
gctcaaatcatccgtggtttaaatgcaacctctgctacggaaattggtggacttgatttt
gacacaattgtcaatagttatgaaaaaattagtgttgattttttctgtgctaccccagaa
gaacatgcattagttgttctatcgcagtgcatgcatgatatgtcatcggaggaactaatc
ctaagacatagtgcttataggtgtttgctctcttttgtcgaattttcttcttcagttctt
ggtcaaggagggatcagtcaccaagaaacaattgacaatatcacattgtacgacagtagt
tggtcaaaagaaagtgtcatgcggctaacaaacaaatttatttttaagcacatgggggaa
gcaatgaacagggagacctcggttaaaaaggagtggataaatttattgcgagaaatggtg
ttgaaatttcctgatgtagcaaacttaagttcgctgaaggctttatacagtaaagatgct
gaagttgattttttcagtaacattacccacttgcagaaacttagaagagcaaaggcatta
attcgcttcaaaaatacaattcctactgtcaacatgcctgaggttatcacaaagaatgtc
tttctgtcactgttcttcaatatgctgtttgatttacaagagggtaaagcagagaatatt
agagttgcttgcatagaggcgcttgcttcaatttctggtcaaatggaatggaagtcatat
tttgctctattaagaagatgcttacgggacattactaaacatcctgataaaaaaaaggtt
ctgatgagattgatatgctctattttggacaacttccattttcaagagaatatttcagaa
gttgggtcaacacaattatatggcagtatggttgtgatgaacaatatgcaagcatgcctt
agtaaagatgtgttcccaaagatacaaaaatttatgaactctcagtcggaaagagttgat
atttatgtccatcttgctgccgtaaagctgttgaaattacttcctgaaaatgctatggat
tcacaacttttgagtatcatccagcatattgtgaactttttgaagaatcgcttagaaagt
gtacgtgatgaagctagatctgcgctggctgcttgtttgaaggaacttggatctgaatac
ttgcaggttgtagtgaaggttttgagaggatccttaaaacgtggttacgagatgcatgtg
ctagggtatacactcaattttttattgtctaagctctttactggcccagccactgggaag
atagattatcttttggatgatctcatttctgtagcagagaaagacatccttggagaggtt
gccgaggaaaaagaggttgaaaagttggcctcgaaaatgaaagagacaaggaaacagaag
tcctttgaaaccctgaaattggtagctcaaagcataacatttaaaagtcacgcacttaag
ctccttaaacctgttactgatcatatgaagaagcatctgaccccaaaagctaaaaccaaa
ttggaaaatatgctatctagtgtagctgctggttttgaaagtaatccttccgtcaatcaa
actgacctgttaatcttcaactatggtctcattgaagatggaataaaagttgaaaatgga
cagggtggaatctcctcgttggttgatgcaaacaaacattcaagagatgtctctaggggg
aagaatttttcgtgtcagacaatacttgctaaggcaccatgttcacaccttattatggtg
tttgcacttaagcttctgcatgggtacatgaagaagatgcaacttgggaaaggtgatgct
cagttgctagcaatgctcgacccttttgttcccttgttaggagactgcttgacttctaaa
tatgaggatgttttatcattaactcttcgatgtctcaccctattgctaagattgcctttg
ccatctgtcaaatcccaagctgacaaaatcaagggagtagtgttgcttattgctcagagt
tcagtagacccatgcaatccgttggtggaatcatgtttgagattgttaactgtgcttctg
cgaaatgagaaagttacactctccacagatcagctacacttattaattcagtttccgctg
tttgttgatattgacaagaatccatcttttgttgccctttcacttctgaaggcaattgta
cgtcgcaagcttgttgtctctgagatatatgatcttgctattcgggtagcagaattgatg
gtgacaagtcaagtcgaaccaattcggaagaaatgcagcaaaatcttactacaattcctg
cttgattaccatctttcagaaaagcggttgcagcaacatttacattttttgctctcaaat
ttaaggtatgagcattcaacaggtagagaagctgttttggagatgcttcacgcaactgtg
gttaaattttcaaaaagtgtggtggatagtatttctgagacattattttttcatttggtg
gcttgcttggctaatgatcaggatcatcatgttcggtctatggctggtcttgtaataaag
tgcctgatagatcgcataagcccaggtcctcaacataatatacttgaatccagtctatcc
tggtacttggaaggaaagcagcaactatggagtgtcgcagcacaggtgttgggattacta
gttgaagttgaagctttaaaggaagcttttgaaagacgtatccaaactgtgttgcttgtt
gccaggggaattttgcagtgtgttgttgatgttaccatgaatgagcaaatagacatttcc
gcagagagtaccattaccttttggaaggaggcatattattccttagtgatgctagagaag
ttgatgcaccaattccctcagttattctttgagaatgattttgaagatatatgggaaatg
attagtcacctgcttctttatccacacatgtggatacgtagcatctcaaatcgcatgata
gcatcatatttcaggaagattgtgattgagaatagtggaaggacatcagaaagatcgctt
ggagcctatactcttatgaagccaagtagactcttctttattgctacctccttttgctgc
cagttgaagtcacaacttacggataaagatgctgatttgatcgaacaaaaccttgttttt
gctattcgtggtttgcattctgtcatcggagaagtggagaatgttgactcctgtccattc
tggtctacgctggaagaatccgagcaacgactttttctcaaagcattccaattgcttgac
tctgaaaaaggaaaaagcatgcttttacctcatatgactggggtatttaaccaaaatgat
gccggtcctgagcagatccgtcgccttctcatctcaaacttgatcaaacagatggggaag
gttgctcttcaaacggatactatacagatgaaagctgttttcaatgtctttcggaatata
tcatcacaaatcagtgtagaagattgtgaacgatatgttttcgaaatcttgttgccttta
tatagagtccgtgaaggattttctggaaaagtgatcccagaatcaatggtacagttggcc
caagaagtgtgtgataaaatacagaattgtttggggattcagaaatttgtacaggtgtac
agccagatcaagaagagtctgaagaccaaaagggacaagaggaagcaagaagagaagcgg
atggctgtcattaatcctatgcgaaatgcgaaaaggaaactacgaattgcggaaaagcaa
cgtgccagcaagagaaggaagataacaacaatgagaatgtcaagaagaatgttgtag
DBGET
integrated database retrieval system
