Cucumis melo (muskmelon): 103497727
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Entry
103497727 CDS
T03195
Name
(RefSeq) DNA mismatch repair protein MSH7
KO
K08737
DNA mismatch repair protein MSH6
Organism
cmo
Cucumis melo (muskmelon)
Pathway
cmo03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
cmo00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
103497727
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cmo03400
]
103497727
DNA repair and recombination proteins [BR:
cmo03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
103497727
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
MutS_V
MutS_III
MutS_I
MutS_II
AAA_29
Motif
Other DBs
NCBI-GeneID:
103497727
NCBI-ProteinID:
XP_008458258
UniProt:
A0A1S3C7K0
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Position
5:complement(29488330..29496370)
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AA seq
1094 aa
AA seq
DB search
MQRQKSLLSFFQKSPSDYRSSDGGASSIGERLTCFPPKPSAAGLEQPAIQTTAHSSLEIR
GTDTPPEKVPRQILPAIEKNRGSSLFSSIMHKFVRVDDKRKANERDGVQEDSSQNEVGKD
SPQLPSIYGKVNDPTEFSKLDVASRRHGKFDIANLNGHRGPVLNIESDEDIAGPETPGMR
PSISRLKRSQEVSLVNCSGDSLQDSTKRIKLLQDSINLKKIHNEISDATSKFEWLNPSQV
RDANRRRPGHPLYDKKTLYIPPDVLKKMSASQKQYWNVKCQYMDILLFFKVGKFYELYEQ
DAEIGHRELDWKMTLSGVGKCRQVGVPESGIDEAVQKLVALGYKVGRVEQLESADQTKSR
GANSVIPRKLVQVTTPSTKADGDIGPDAVHLLAIKEESCGLDNNSISYGFAFVDCAALKF
WTGSIKDDASCAALGALLMQVSPKEIIYEARGLSKETHKVLKKYSPTGFTALEFTSGSPV
TNFLEASEVKLLVQSKAYFKGSLNLWNQTIESTVHDDIALCALGGLINHMSRLMLDDVLR
NGDLLPYQVYRGCLRMDGQTMVNLEIFRNNDDGGLSGTLYKYLDNCMTSSGKRLLRLWIC
HPLKDVEEINNRLNVVEELMAQSEIMVLLGTTYLRKLPDLERLLGQIKATVQSSASLALP
LIRKKLQKRRVKLFGSLVKGLSTGLDLLIQVQKEGLIISLPKVVKLPQLSGNGGLDQFLT
QFEAAIDSEFPDYQNHDVTDSGAERLSILIELFVEKATEWSKVIHALNCIDVLRSFAIIA
HSSRGSMSRPLILPQSSNSMLSPEKQGPVLKINGLWHPYALVESGETPVPNDIILGPDQH
GYHPRTLLLTGPNMGGKSTLLRSTCLAVVLAQLGCYIPCETCTLSVVDTIFTRLGATDRI
MTGESTFLVECSETASVLQHATQDSLVILDELGRGTSTFDGYAIAYAVFRHLIEKVNCRL
LFATHYHPLTKEFASHPHVMLQHMACTFNDQELIFLYRLRSGACPESYGLKVATMAGIPG
RVVEAASRASQMMKQTIKENFKSSEQRSEFSTLHEEWLKTLITISEFKGNDLDENDAFDT
LFCLWYELKKSYNC
NT seq
3285 nt
NT seq
+upstream
nt +downstream
nt
atgcagcgccagaaatctttgttatccttcttccaaaaatctccgtccgattatcggagc
tccgatggcggtgcttcctccatcggcgagcggctcacttgctttccgccgaaaccaagc
gcagccggtttggagcagccggctatccagaccactgcgcattcctccctggagattaga
ggaaccgacactccgccggagaaggtgcctcgccagattttgccggctattgagaagaac
agaggttcttctctcttttcaagcatcatgcataaatttgtgcgagtcgatgataaacgt
aaggcgaacgagagggacggagttcaagaagattcctctcagaatgaggttggaaaagat
tctcctcagttaccttccatttatggtaaggtaaatgatccgacagaattttcgaaacta
gatgtagcttctagacgtcacggtaaatttgacattgcaaatttaaacggacatagagga
cctgtattgaatattgaaagcgatgaggacattgctggaccagaaacacctggcatgcga
ccttctatctcacgtttgaagagatctcaagaggtttctcttgtgaattgtagcggtgat
tctttgcaagatagtaccaaaagaatcaaactccttcaggactcgattaacttgaaaaag
attcacaatgaaatttctgatgcaactagcaaatttgagtggctcaatccctctcaagtt
agagatgccaatcgtagaaggcctggccatcctctttatgataaaaaaacactatacata
ccacctgacgtgctgaagaaaatgtcagcatcgcaaaaacaatactggaatgtgaaatgt
caatatatggacatcttgctcttcttcaaagtggggaagttctatgagctatatgaacaa
gatgctgaaattggtcacagggagcttgactggaaaatgacattaagtggtgttgggaag
tgtaggcaggttggtgtacctgagagtggaattgatgaagccgttcaaaaacttgttgct
cttgggtataaagttgggagagttgagcagttggaatctgcagatcaaacaaaaagcaga
ggtgcaaattctgtgatacctaggaaattggtacaggtgactactccatcaaccaaggct
gacggtgacattgggcctgatgccgttcatttgcttgccatcaaagaggagagctgcggg
ctggataataattcaatttcatatgggtttgcttttgttgattgtgctgctttaaaattt
tggactggttctatcaaagatgatgcttcctgcgctgctctgggtgctctcttgatgcaa
gtgtccccaaaggaaataatatatgaagctagaggactatctaaagaaacacataaagtt
ctcaagaagtactcgcctactggcttcactgctctagaattcacatcagggtcgccagtt
acaaattttctagaagcttcagaggttaaacttttggtccagtctaaagcatactttaaa
ggctccttgaatttgtggaatcaaacaatcgaaagcacagtccatgatgacattgctcta
tgtgcgcttgggggacttatcaatcacatgtcaaggctgatgttagacgatgtcttgcgg
aatggagatttactgccataccaagtatacagaggctgcctaagaatggatggacaaaca
atggttaatcttgaaattttcagaaacaatgatgacggtggtctgtcaggtacactgtac
aagtatcttgataactgcatgacatcatcgggaaagcggcttttaaggttatggatctgt
catcctcttaaagatgttgaagagataaacaacagacttaatgtggttgaagaactgatg
gcgcaatctgaaattatggtacttctaggtaccacctatcttcgcaagcttccagacttg
gagaggttgcttgggcagattaaggctactgtccagtcatctgcttctcttgcattacca
ttgattcgcaaaaagttacagaaacgacgggtgaaactatttgggtctctggtgaagggc
ctcagtactggattggatctattaattcaagtccagaaggaaggtctcattatttctcta
ccaaaagtagttaaacttccacagctcagcggcaatggtgggcttgatcaattcctcact
caatttgaagcagctatagatagcgagtttccagattatcagaaccatgatgtaacggat
tccggtgctgaaagactctctatactgatcgagttatttgtagaaaaagctactgaatgg
tctaaagtaattcatgccctcaattgtatcgacgtcctgagatcatttgcaatcattgct
cattcatctagagggtccatgtctaggcctctaattttgcctcaatcgagcaattcgatg
ttaagtccagaaaagcaagggccagttcttaaaataaatgggctatggcatccatatgcc
cttgtggagagtggagaaacaccagtccctaatgatataatccttggtcccgatcaacat
ggctaccatcctcgtactctacttctaacaggaccaaacatgggcgggaaatccacactt
cttcgttccacttgtctagctgttgttcttgcacagttgggttgctacataccttgtgag
acatgcacactgtcggttgtcgataccatctttacgcgacttggggccactgatcgaatc
atgacaggagaaagtacgttccttgttgaatgttcggaaacagcttcagttctccaacat
gcgactcaggactctcttgttattcttgatgaactcggccgaggaaccagcacctttgat
ggctatgccattgcatatgctgtgtttcgccatttgatagaaaaggtgaactgtagactt
ctatttgctactcactaccatcctctaacaaaagagtttgcttcccatcctcacgtcatg
cttcaacacatggcctgcacattcaacgaccaggagctcatatttctatatcgtcttcgc
tccggagcttgcccggagagctatggcctaaaagtagcaaccatggctggaatcccagga
cgagtcgttgaagcagcttcaagagctagccaaatgatgaagcaaaccatcaaagagaac
ttcaaatcgagcgagcaacgatcggagttctcaacacttcatgaagagtggttgaaaact
ctaatcacaatctcggagtttaaaggtaacgatctcgatgaaaatgatgctttcgataca
ttattttgtttatggtatgagcttaagaaatcgtataactgctag
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