KEGG   Cucumis melo (muskmelon): 103497954
Entry
103497954         CDS       T03195                                 
Name
(RefSeq) DNA polymerase epsilon catalytic subunit A-like isoform X1
  KO
K02324  DNA polymerase epsilon subunit 1 [EC:2.7.7.7]
Organism
cmo  Cucumis melo (muskmelon)
Pathway
cmo03030  DNA replication
cmo03410  Base excision repair
cmo03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:cmo00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    103497954
   03410 Base excision repair
    103497954
   03420 Nucleotide excision repair
    103497954
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:cmo03032]
    103497954
   03400 DNA repair and recombination proteins [BR:cmo03400]
    103497954
Enzymes [BR:cmo01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     103497954
DNA replication proteins [BR:cmo03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   DNA polymerase epsilon complex
    103497954
DNA repair and recombination proteins [BR:cmo03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Long Patch-BER factors
     DNA polymerase epsilon complex
      103497954
SSDB
Motif
Pfam: DUF1744 POL2_thumb DNA_pol_B_exo1 DNA_pol_B zf-DPOE zf_DPOE_2 DNA_pol_B_exo2 RNase_H_2
Other DBs
NCBI-GeneID: 103497954
NCBI-ProteinID: XP_008458599
UniProt: A0A1S3C879
LinkDB
Position
11:28951660..28986022
AA seq 2217 aa
MSGESRRRGRAEKSSRSKKQRVIRSAEEEIESKLGFDLFSEGDKRLGWLLTFASSSLEDQ
DTGKVYSCIDLYFVTQDGSSFKSKYKFRPYFYAATKDKMETDVEAYLRRRYEGRIADIEI
LEKEDLDLKNHLSGLRKAYLKLSFDTVQELMNVKSELLHVVENNWAKSDAAEAYDSILFG
KREQKPQDFLECIIDLREYDVPYHVRFAIDHDLRCGQWYDVSVSSTGVTLEKRKDLLQRA
EVHICAFDIETTKLPLKFPDAEYDMIMMISYMVDGNGYLIINRECVGEDIENLEYTPKPE
YEGFFKVTNVKNELELLKLWFSHMREVKPGIYVTYNGDFFDWPFIESRAAYHGFKMSDEV
GFQCDKNQGECRSKFACHLDCFSWVKRDSYLPQGSHGLKAVTKAKLGYDPLEVNPEDMVR
FAKEKPQMMASYSVSDAVATYYLYMTYVHPFIFSLATIIPMSPDEVLRKGSGTLCEMLLM
VQAYKANVVCPNKHQSDPEKFYSNRLLESETYIGGHVECLESGVFRSDLPTSFRLDPSAY
DLLINNLDRDLQYAIQVEGKMDLESVSNYSDVKNAIMEKLIRLRDEPVREEGPLIYHLDV
AAMYPNIILTNRLQPSSIVTDEVCTACDFNRPGKTCLRKLEWVWRGEVFMAKKSDYYHLK
KQIESEFVDSGNVRLSKSFLELPKLEQQAKLKDRLKKYCQKAYKRVLDKPVTEVREAGIC
MRENSFYIDTVRSFRDRRYEYKGLNKVWKGKLSEAKSSGNSIKIQEAQDMVVLYDSLQLA
HKCILNSFYGYVMRKGARWYSMEMAGVVTYTGAKIIQNARLLIEKIGKPLELDTDGIWCA
LPGSFPENFTFKTRDSKKLTISYPCVMLNVDVARNNTNDQYQTLIDPVKKTYKTHSECSI
EFEVDGPYKAMILPASKEEGILIKKRYAVFNDDGTLAELKGFEIKRRGELKLIKVFQAEL
FDKFLHGSTLEECYSVVASVANRWLDLLDNQGKDIADSELLDYISESSTMSKSLVDYGEQ
KSCAVTTARRLADFLGETMVRDKGLRCQYIVACEPKGTPVSERAVPVAIFETDAEIMKFY
VRKWCKISSEVGIRSIIDWSYYKQRLSSAIQKIITIPAAMQKVANPVPRVVHPDWLHKKV
REKDDKFRQQKVADMFASSSRVKYSKKNSDVSCSKNAMDEDNSEDLEDFQKKTSSTNGPK
PVVRCYDVKGKKHSLTSDVEINSEMQDNFNDGGFEPSSPLDVENIDKNVDYSGWLEIKKR
KWKDTLDRRKKQRLVSSRTPLATNNITRELNGATNNKDGPRTGVGSYFKRHEGSVTRCHW
QILQLVHSSQSGQYFAWAVVEGVMLKIPINVPRVFYLNSKVPITDEFVGRRVNKTLPHGR
HSYNLYEVVTDEGQFRTQRNKLAALLADPEVEGIYESKVPLEFKSIFQIGCVCKVDKTAK
KRNIQDGWSLDELQMKTTTECSYLEKSISFFYVYHSISEGRAIFITFFPSTRSIFVVVVN
PYQNKDLSSTFLERQFREACQMLSGESQPPKSGITYKVDYVVNIKEAEVILQRSIAEHRS
LNHGPTLAVIQCPSVQRLKSGVRVLDDFPCVTIPSNARDNQYQVLGWQQTAAKIGMQRCA
ASSQWLNERISLARYAHVPLGNFGLDWLIFTADIFFSRALHDQQQVLWISDDGVPDIGGI
NIEDVCFADEVQQPILTYPGAYRKVSVEFKIHHLAVNALLKGNQVNEMEGGSLFGFEHDM
QCGAQFSNEESGFDEAASCAPAFRVLKQLIQRCLTDAVTSVNVYADAILQHLYRWICSPQ
SKLHDPALHRLLHKVMQKVFALLLSELRKLGATIIFANFSRIIIDTGRFDLSSAKAYCDS
LLKTMQTRDLFEWIELEPLQFWHSLLFMDQYNYGGIRANDDERTDIESQVDIEANWNIAE
YLPEKIQDHFLFIISQFLYMPWNYATKQAAARASLQRDDTCTPSITVLAAESFELHVTEH
LKEKLSSYFSDKMLGIVRDIVLHMKGKENTQDVLPERPSGNIHKGDAALEFIKLVCSVLA
IDQNVHHDVLVMRKNLLKFVRVREFAPEAEFSISSPSVVLPNVICSYCEDCRDLDLCRDS
ALLAQEWRCAVPQCGQPYDQEEMENALLQIVRQRERLYHMQDLVCVRCKQVKAAHLLEQC
GCAGSFKCKEDASEYYSKMLVLLNVANRQKFQLLEEFTTWILENSSIPGIETQGKKG
NT seq 6654 nt   +upstreamnt  +downstreamnt
atgagcggcgaaagccgacggcgaggccgtgccgaaaagagtagtaggtcgaagaagcag
agggtaattcggtcagctgaggaggagatcgaatcgaaacttggatttgatctcttctct
gaaggcgataaaaggcttggatggttgctcactttcgcttcttcatctttggaggatcag
gatactggaaaggtctatagttgtattgatctttattttgtgacacaggatgggagcagt
ttcaagtcaaaatataaatttcgtccttatttctatgcagccacaaaggataaaatggaa
actgatgtggaggcatatttgagacgccgttatgaaggtcgaatagctgatattgagatt
ttagaaaaagaagaccttgatcttaagaatcatttgtcaggattgcgcaaggcatatttg
aaactatcatttgacactgttcaagaattgatgaacgtgaagagtgaactattgcatgtt
gttgaaaacaactgggcaaagtctgatgctgcagaagcatacgattctattttatttggt
aaaagggaacaaaagccacaagattttctagaatgcattattgatcttcgagagtatgac
gttccttaccatgttcgctttgctattgatcatgatttacgctgtggacaatggtatgat
gttagtgtttcaagtactggtgttacattggagaagagaaaagatcttctgcaacgtgcc
gaagttcacatatgtgcatttgatattgaaaccacaaagctaccattgaaattcccagat
gctgaatatgatatgataatgatgatttcctatatggttgatggaaatgggtacttgatt
atcaatagagagtgtgttggagaagatattgagaatttggagtacactccaaaaccagaa
tatgaagggttctttaaagtcaccaacgtaaaaaatgagttagagcttctcaaactgtgg
ttttcccatatgcgagaggtgaaacctggaatctatgtcacttataatggtgattttttt
gactggccattcattgaaagcagagcagcttatcatggctttaagatgagtgatgaagta
ggatttcaatgtgacaagaatcagggggaatgccgttcaaaatttgcttgtcatttggat
tgcttttcctgggtaaagcgtgatagttatctaccccaaggtagccatggtttgaaggct
gtcacaaaagctaaattgggttatgatcctcttgaagtgaatcccgaggatatggtgcgg
tttgcaaaggaaaagcctcagatgatggcttcctattctgtttcagatgctgttgctaca
tactacttgtacatgacctacgttcatcctttcatattttctttagcaaccattattcca
atgtcaccagatgaggtgttgcgcaagggaagtgggacactttgtgaaatgcttctaatg
gttcaggcttacaaggctaatgtcgtgtgtcctaacaaacatcaatcagatccagagaag
ttctacagcaaccggcttcttgaaagtgagacatacattggtggtcacgtagaatgcctt
gagagtggtgtatttagatctgatcttcctaccagttttaggcttgatccatctgcatat
gatctattgataaacaatttggatagagatctgcaatatgccatacaagtagaaggaaag
atggacttggagtctgtatcaaattatagcgatgtgaagaatgctatcatggaaaagctc
attagattgcgggatgagcctgtacgcgaagagggccctctgatatatcaccttgatgtg
gcggcgatgtatcctaatattattttaacaaatagacttcagccatcatcaatagtcaca
gatgaggtttgtactgcatgcgatttcaatcgtcctgggaaaacttgcctacggaaactt
gaatgggtttggcgtggagaggtattcatggctaaaaaaagtgactattatcatctgaag
aagcaaattgagtctgagtttgttgatagtggcaatgttcggttgtcaaaatcatttctt
gaacttccgaagttggagcagcaagcaaagctcaaagatcgtttaaagaaatactgtcag
aaggcttataaacgagtacttgataagccggtcactgaagttcgagaagcagggatttgc
atgagagaaaactctttctatatcgacactgttcgtagttttcgagatagaaggtatgaa
tacaaagggctcaataaagtatggaagggaaaattatctgaagctaaatcaagcggaaat
tcaatcaagatccaggaagcccaagacatggtagttctttatgattctctacaactagct
cataaatgtatcctcaactccttttatggatatgtgatgcgaaagggcgctcgatggtat
tcgatggaaatggctggggtagttacatatacaggagcaaaaatcattcagaatgctcgt
ctgttaattgagaaaattggaaaaccactggagttggacactgatggtatctggtgtgct
ctacctggatcgttcccagagaattttaccttcaaaacaagagattcgaagaagttgaca
atttcatatccatgtgttatgcttaatgttgatgtggcaaggaacaacacgaatgatcaa
taccagacgcttattgaccctgtgaagaaaacatataaaacacacagtgaatgctcaatt
gaatttgaagtagatggaccatataaggcaatgatccttcccgcttccaaggaagaaggc
attttgataaagaagagatatgctgtcttcaatgatgatggaacacttgcggagctaaaa
ggctttgagatcaagcgtaggggggagttaaagctcatcaaagttttccaggcagaactt
tttgacaagtttcttcatggttccacattagaggaatgctattcagttgttgcatctgtt
gcaaatcgatggcttgatcttctagataatcaaggaaaagatattgcagatagtgagttg
cttgattatatatctgaatcaagtaccatgagcaagtctttggtagactacggggaacaa
aagtcttgtgctgttaccactgccagacgtcttgcagattttcttggtgaaacaatggtc
agggacaaaggcctacgttgtcaatacatagttgcatgtgaacctaagggtactcctgta
agtgagcgtgctgttccagtggcaatctttgagactgatgcagagataatgaaattttat
gtacgtaaatggtgcaaaatttcatctgaagttggcatccgatccatcattgactggtcc
tactacaagcaacgcttaagctcagccattcaaaagattataacaattccagcagccatg
caaaaggttgcaaatcctgttcctagggtggtccatcctgattggttacataagaaagtt
cgagagaaggatgataaatttcgccaacagaaagtagctgatatgtttgcatcctcgagc
agggttaaatattcaaagaagaatagtgatgttagctgcagcaaaaatgctatggatgaa
gataattctgaagatttagaagattttcaaaagaaaacaagttctacaaatggccccaaa
ccagttgtccgatgttatgatgtcaaaggcaagaaacattcacttacgagcgatgttgaa
ataaactcagagatgcaggataattttaatgatggaggatttgagccttcttcacccttg
gatgttgaaaacatagacaaaaatgtagattacagtggatggcttgaaattaagaagcga
aaatggaaggatactttagacaggaggaagaagcaaaggttagtaagttcaaggactccg
cttgctactaataacattacaagggagttaaatggtgctacgaataataaagatggtcct
agaacaggagttggttcatattttaagaggcatgaaggatctgtaactcgctgccattgg
cagattttacaacttgttcatagttcacagagtggccaatattttgcttgggctgttgtc
gaaggagttatgctaaagatccctattaatgttcctagagttttttaccttaattctaaa
gtacctattacagatgaatttgtgggcaggcgtgttaataaaactcttccccatggaagg
cacagttataacttgtatgaggttgtgactgatgagggtcaatttaggacacagaggaat
aaacttgcagccctacttgcagatccagaagtagagggaatctatgaaagcaaggtacca
ttagaattcaagtccatctttcagattggctgtgtctgtaaagttgataaaactgctaaa
aagcgaaacattcaagacggatggagtctggatgaactgcaaatgaagactacaacagaa
tgcagttatcttgaaaagtcaatctctttcttctatgtgtatcatagcatttctgaagga
agagctatcttcattaccttttttccctccacaagatcaatatttgtggtggtggttaat
ccttaccagaacaaagacttgtcatcaacttttctcgaaaggcaatttcgtgaagcttgt
caaatgctgtctggtgaatcacaacctcctaagagtggtataacttacaaggtagactat
gttgttaacatcaaagaagctgaagtgattttgcaaagatcgatagcagaacacaggagc
ttaaaccatggacctactctagctgtaattcaatgcccaagtgttcaacggctgaagtca
ggtgtgagagtattagatgattttccatgtgtgaccatcccttctaatgctcgtgataac
caatatcaggttcttggttggcaacaaacagctgcaaagattggaatgcaacgatgtgct
gcatcatcccaatggttgaatgagagaatctctcttgcaagatatgcccatgtaccatta
ggaaattttggacttgattggttaatttttacagcagatatatttttttcaagagcatta
catgatcaacaacaggtactttggatatcggatgatggtgttccagacataggaggcatt
aacatagaagatgtgtgttttgctgatgaggtccaacaacctattctgacgtaccctgga
gcatatagaaaagtttctgtggagtttaagatccatcatttggctgtcaatgctctgctg
aagggcaaccaagtgaatgaaatggaaggaggcagtttgtttggctttgaacatgatatg
caatgtggggctcaattttctaatgaagaaagtggctttgatgaggctgcttcatgtgct
ccagccttccgtgtcctgaaacaattgatacagaggtgtcttacagatgcagttacatct
gtgaatgtatatgctgatgcaattttgcagcatctgtacagatggatttgcagcccccaa
tcaaaacttcacgacccagctcttcatcgtttgctccacaaggttatgcaaaaggtgttt
gctcttttgttgtctgagctacgcaaattaggtgccaccattatatttgcaaacttctca
agaattattatagacacgggaaggtttgatctctcttctgccaaagcatactgtgacagc
ttgctgaaaacaatgcaaacaagggatctgttcgagtggattgagctggaaccattacag
ttttggcattccctgttgtttatggatcagtataactatggtggaatccgggcaaacgat
gatgagagaacagatattgaatctcaagttgatatagaggccaactggaacattgccgag
tatctgcccgagaagattcaggatcactttctttttatcatctcccagtttttgtatatg
ccatggaattatgcaaccaagcaagctgcagcaagagcatcattgcagcgtgatgacaca
tgtaccccatccattactgttttagctgctgaatcgtttgaattacacgtgacagaacat
ctgaaagaaaagctaagctcttacttcagtgacaaaatgttgggaattgttcgggacatt
gttcttcatatgaaagggaaggagaacacccaggatgttttgccagaacgaccttctggt
aatatccacaaaggagatgctgctttggaatttattaagctcgtctgctctgttttggct
attgatcaaaatgtccatcatgatgtcctggtaatgaggaaaaatttactgaagtttgtg
cgtgtaagagagtttgcacccgaagctgagttttctatttccagcccgtccgtagtcttg
cccaacgttatttgcagctattgcgaagattgtcgagatctggacttgtgccgcgactca
gctttactagcacaagaatggcgctgtgctgtgccacaatgtggacaaccatatgatcaa
gaagagatggagaatgcgctgcttcaaatcgtgcgacagagggagcgtctctatcacatg
caggatctggtatgcgttcgttgcaaacaagtcaaagcagctcatttattggaacaatgt
ggctgtgccggttcatttaaatgcaaagaagatgcatcagaatattacagcaagatgctg
gttcttcttaatgtagccaatcgtcagaagtttcaactactggaagagttcaccacgtgg
atcttagaaaactcgagcattcctggaattgaaactcaagggaagaagggatga

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