Cucumis melo (muskmelon): 103498255
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Entry
103498255 CDS
T03195
Name
(RefSeq) chaperonin 60 subunit alpha 2, chloroplastic isoform X1
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
cmo
Cucumis melo (muskmelon)
Pathway
cmo03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
cmo00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
103498255
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cmo03019
]
103498255
03110 Chaperones and folding catalysts [BR:
cmo03110
]
103498255
03029 Mitochondrial biogenesis [BR:
cmo03029
]
103498255
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
cmo04147
]
103498255
Enzymes [BR:
cmo01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
103498255
Messenger RNA biogenesis [BR:
cmo03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
103498255
Chaperones and folding catalysts [BR:
cmo03110
]
Heat shock proteins
HSP60 / Chaperonin
103498255
Mitochondrial biogenesis [BR:
cmo03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
103498255
Exosome [BR:
cmo04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
103498255
Exosomal proteins of other body fluids (saliva and urine)
103498255
Exosomal proteins of breast cancer cells
103498255
Exosomal proteins of colorectal cancer cells
103498255
Exosomal proteins of bladder cancer cells
103498255
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
Motif
Other DBs
NCBI-GeneID:
103498255
NCBI-ProteinID:
XP_008459023
UniProt:
A0A1S3C9C2
A0A9I9DQ19
LinkDB
All DBs
Position
12:complement(18394148..18400585)
Genome browser
AA seq
587 aa
AA seq
DB search
MEFSARLSSPAPFPQTLLFPLMKHGGSRRLSGYARNSWNIRNFVVRAGPKRISFGKECRG
ALLAGIDKLADAVSVTLGPKGRNVILSEQGTLKVVNDGVTIAKAIELSDAIENAGVVLIQ
EVASKMNDLAGDGTTTAIILAREMIKSGLLAVSFGADPVSLKKGMDKTVKELIKVLKKKS
TPVRGKDDIKAVAMISSGNDEYVGNLIAEAIEKIGPDGVISIESSKSSETSVIIEEGMKI
DKGYMSPQFITNQDKSIVEFDNAKVLVTDQRISSVKEIVPLLEKTVQLSLPLLIIAEDIS
RQVLETLVLNKIQGLVNVAVVKCPGLGERKKALLQDIALMTGADFLSGDLGLGLEGATSD
QLGIARKVVITSNSTTIVADPSTKDEIQARISQIKKDLLETDNSNLSRKLSERIAKLSGG
VAVIKVGAHTEVELEDRKLRIEDAKNAVFAAMNEGIVAGGGATYVHLYELLPTIKQSMEN
QDEQIGADIVGKALLAPAKLIASNAGDDGIVVVEKTQACDWRHGYNAMANKYEDLFNAGV
VDPCLVSRCALQIAASVTGIVLTTQAIIVEKTKKPKPPIPLVPGISP
NT seq
1764 nt
NT seq
+upstream
nt +downstream
nt
atggaattctctgcccgtctctcctcaccggctccctttccccaaactctactcttccct
ctaatgaagcacggtgggagtcgaaggctgtctgggtacgcgagaaattcatggaatatc
agaaattttgtcgttagggccggtcctaagaggatatcttttggtaaagaatgcagaggg
gccttgctagctggtattgataagttggctgatgctgtttcggtcactttaggacctaaa
ggccgcaatgttattctctctgaacagggaacacttaaagtggttaatgatggggttaca
attgcgaaagctatcgagctttctgatgcaattgagaatgcaggagtggttctgatccaa
gaggttgctagtaaaatgaacgacttggctggcgacggaaccaccaccgcaataattttg
gcacgtgaaatgatcaaatccggattattggcagtttcctttggggctgatccagtttca
ttaaagaaaggaatggataagactgtaaaggagttgatcaaggttttaaagaagaaaagt
actcctgtacgaggaaaagatgatattaaagctgttgcaatgatatcttctggaaatgat
gaatatgtggggaacttaattgctgaagcaattgaaaagattggccctgatggtgtgatc
tcaatcgagtcatcaaaatcctctgaaacttctgttataatagaggaaggaatgaagatt
gataaaggttatatgtcgcctcagtttattacaaaccaagataagtctattgtggagttt
gacaatgcaaaggtcctagtaaccgatcaaaggatttcttctgtcaaagaaattgttcct
ttgttggagaagaccgtacagctaagtcttcctctactgataattgcggaggacatctca
agacaagttctagagaccctagtgctgaacaagatacagggtttagttaatgtggctgtt
gtaaaatgtcctggccttggtgaaagaaagaaggctctattgcaagatattgcactaatg
acaggtgctgattttctctctggagatttgggtctaggacttgaaggtgcaacttcagat
cagcttggaattgctaggaaagtagttataacatctaattcaacaacaatagttgcagat
ccctctactaaagatgaaattcaagcaagaatttcacagattaagaaggatcttcttgaa
acagataattccaacctctcaagaaagctgtcggagaggattgctaaactttctggtgga
gttgctgtcatcaaggtgggagcacatacagaggtggaacttgaagacagaaaacttaga
attgaggatgcaaagaatgctgtatttgctgccatgaatgaaggcattgttgctggtgga
ggtgccacctatgttcatttgtatgaattgcttccgaccataaaacagtcaatggaaaat
caagatgagcagattggtgctgatattgtgggcaaggcacttcttgctcctgcaaaactc
attgctagtaatgcaggggatgatggaatagttgttgtggagaaaactcaagcatgcgat
tggcgacacggctataatgcaatggcaaacaaatatgaagatcttttcaatgctggtgta
gtagatccttgccttgtttccagatgcgcgcttcagattgcagcctcagttactggaatc
gttttaacgactcaagccataattgtagagaaaacaaagaagccaaagccacccattcct
cttgttcctggaatatctccatga
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