Cucumis melo (muskmelon): 103498291
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Entry
103498291 CDS
T03195
Name
(RefSeq) vacuolar sorting protein 3 isoform X1
KO
K20177
vacuolar protein sorting-associated protein 3
Organism
cmo
Cucumis melo (muskmelon)
Pathway
cmo04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
cmo00001
]
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
103498291
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cmo04131
]
103498291
Membrane trafficking [BR:
cmo04131
]
Endosome - Lysosome transport
Tethering complex
CORVET complex
103498291
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-Vps39_C
Clathrin
Vps39_1
CNH
TPR_Vps41
PDZ_6
Motif
Other DBs
NCBI-GeneID:
103498291
NCBI-ProteinID:
XP_008459073
UniProt:
A0A1S3C9C4
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Position
12:19231053..19256043
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AA seq
1011 aa
AA seq
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MAKPERAVLEPLGEEFDISTHFRTSIRSLAVSPFSDSETLIYAGTKSGALVLFSVTPKYS
SSTALVSETASLDTPRITSSSEGLSLLRTVAVSVSSIVCLHVLRGIEKVLVLCSDGFLYI
VDSLLSLPVKRLAGLKGVSLIAKRIRSSESEFSSLYGRVDNNSGFVSPSQRLLQRLGSGM
RTNGLKIKESESPREESDFVFAALAGKRLILFEVVLGRRTGRSDRNTNDPTESLLILKEL
QCKEGFSTMVWLNDSIIAGAASGYYLFSCVTGESSLIFKLPELSSPPCLKLLRKECKVLL
LVDRVGITVNAYGQPIGGSLVFHDIPNSVAEISSYVVVASSGQLKLYHRNTGSCIQTITF
NGNGTEPCIVSDEDDGSGDVIAAAVTSKVMCYQKLPCDEQIKDLLRRKNFKEAISLAEDL
ECAGEMSKDMLYFVHAQIGFLLLFDLQFEEAVNHFLQSETMQPSEIFPFVMKDPNRWSLL
IPRNRYWAMHPPPAPFEDVIDDGLLAIQRAAFLKKVGVETAVNDDFLLNPPTRSDLLESA
VKHIIRYLEASRQKELVSAVREGVDTLLMCLYRTLNSVDKMEKLASSENNCVVEELETLL
EDSGHLRTLAFLYASKGMSSKALAIWRILGRNYPSRLLKDSSMDESTMDSNVWDISGKET
AAAEASKILEESSDQALVLQHLGWIADINQHFAIQILTSEKRESQLSPDDIITAIDSKKV
EMLQRYIQWLIEEQESCDPHFHSLYALSLAKSAVELDSTQSLDSSSDPKISDQSLNSIFE
QPIRERLQIFLQSSDLYDPEEVLHLIEGSELWLEKAILYRKLGQEALVLRILALKLEDSE
AAEQYCAEIGRSDAYVQLLDMYLDPQNGKEPMFKAAVRLLHNHGESLDPFRVLETLSPDM
PLQIASETILKLLKARFHHKCQGQIVHNTSRALDLEARLARLEERSRHVQINDESLCDSC
HARLGTKLFAMYPDDTVVCYKCYRRQGESTSVTGRNFKQDVLIKPGWLVMD
NT seq
3036 nt
NT seq
+upstream
nt +downstream
nt
atggccaagcccgaaagggctgttcttgaaccactcggtgaggagttcgatatatccact
cattttcgcacttcaattagatctctcgccgtctccccgttctctgattccgagacctta
atatacgccggaactaaatctggggcacttgttttgttctctgtaactccaaaatattca
agttctaccgctctagtttccgaaactgccagcttggatactcccagaattacctcttca
tcggagggactttcacttctgaggactgttgcggttagcgtttcctcaattgtctgtttg
catgtactccgtggaattgaaaaggttttagttctttgttccgatgggtttttgtatatt
gttgattcgcttctttcactgccagtaaagaggttggcgggtttgaaaggagtttctttg
attgcgaaacgaattaggagtagcgagtctgagttttctagtctgtatgggagggtggat
aataattctggatttgttagccctagtcaaaggcttttgcagagactgggaagtgggatg
cgaacaaatggcttgaaaattaaggaatcagaatcgccgcgtgaagaaagtgatttcgtt
tttgcagctctagctggtaaaaggttgattttatttgaagttgttttaggtcgtcgaact
ggcagaagtgatcgaaatacaaatgatcccaccgagtcccttctaattttgaaggagtta
cagtgtaaagaaggattttcaacaatggtgtggctgaatgattcaataattgctggtgca
gctagtggctattatcttttttcatgtgttacaggagagagtagtttaatattcaaatta
ccagagttatccagtcctccatgccttaagttgttgcggaaagagtgtaaagtgctacta
ttggtagatagggtagggattactgttaacgcttatggtcaacctattggtgggagtctc
gtgtttcatgatattccaaactctgttgctgaaatatcttcgtatgtggttgttgcaagt
agtggacagctgaagttatatcataggaatactggtagctgtattcaaactattactttt
aatggaaacggaactgagccttgcattgtttcagatgaggacgatggtagtggagatgtt
attgccgctgctgtgactagcaaggttatgtgctatcaaaaattgccttgtgatgaacaa
attaaagatttgctgagaaggaagaactttaaggaagccatctctttggctgaggaccta
gagtgtgcaggtgaaatgtccaaggatatgctatactttgttcatgctcaaattggtttt
ctcttgctttttgacttgcaatttgaggaagcggtaaatcactttttgcaatctgagaca
atgcagccttctgaaatatttccatttgtgatgaaggacccaaatcgttggtccctactg
attcccagaaatcggtactgggcaatgcatcctccccctgctccctttgaagatgttata
gacgatggcttgcttgccatccagagagccgcatttcttaaaaaagtaggagtagaaacg
gctgtaaacgacgattttctcttgaatccaccaactaggtcagatttgttggagtcagct
gtgaaacatattatcaggtacttggaggcttcccgccaaaaagaactggtatcggctgtt
agagagggagttgacactcttttaatgtgcctgtatagaactttaaattctgttgacaag
atggaaaaactggcatcttcagaaaacaattgcgttgtggaggagttggaaactttatta
gaggactctggacatttgcgtacgcttgctttcctttatgctagtaaagggatgagctca
aaggctcttgcaatttggcgtatcttggggagaaattatccatcccgccttttgaaggac
tcttctatggatgagagtactatggatagcaatgtttgggatatatctggtaaggaaacg
gctgcagcagaggcatcaaagattcttgaggagtcatctgatcaagcattagttcttcag
cacctcggatggattgcagacatcaaccagcattttgccattcagattttgacatcagaa
aaaagagaatctcaattatcaccagatgacataataacggctattgattccaagaaggta
gaaatgcttcaaaggtatattcagtggttgattgaagagcaagagtcttgtgatcctcac
ttccactcactatatgctctctcattagccaaatcagcagtcgaacttgatagtactcaa
agccttgattcgtcatcagaccctaaaatttctgatcagagccttaactcaatatttgaa
cagccaatccgagaaaggttacagatctttttacagtcttcggatttgtatgatccagaa
gaggttttacacttgattgaaggatcagaattatggttggaaaaggctattctataccgg
aaactagggcaagaggcattggtgctccggattttagccttgaaacttgaagacagtgaa
gctgctgagcagtactgtgctgaaattggcagatcagatgcctacgtccagttactcgat
atgtatttggatcctcaaaatggtaaggagcctatgtttaaagctgccgttcgccttctc
cacaaccatggagaatcattggatccattccgagtcttagagactttgtccccagatatg
ccgcttcaaattgcttcagaaacaatattgaaactattgaaagctcgatttcatcataaa
tgtcaaggacagattgtacataatacctcccgtgctctagaccttgaggcgaggttggcc
agattggaggaaagatcaagacatgttcagatcaatgatgagagcctctgtgattcttgt
catgcacgccttggaactaaattgtttgcaatgtaccctgatgacacagttgtctgttac
aagtgctaccgtcgtcagggagagtcgacatcggtcacgggtcgcaacttcaaacaagat
gtcctgatcaaacctggttggctagtgatggactaa
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