KEGG   Cucumis melo (muskmelon): 103498588
Entry
103498588         CDS       T03195                                 
Name
(RefSeq) DNA-directed RNA polymerase II subunit 4-like
  KO
K03012  DNA-directed RNA polymerase II subunit RPB4
Organism
cmo  Cucumis melo (muskmelon)
Pathway
cmo03020  RNA polymerase
cmo03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:cmo00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    103498588
  09124 Replication and repair
   03420 Nucleotide excision repair
    103498588
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:cmo03021]
    103498588
   03400 DNA repair and recombination proteins [BR:cmo03400]
    103498588
Transcription machinery [BR:cmo03021]
 Eukaryotic type
  RNA polymerase II system
   RNA polymerase II
    Pol II specific subunits
     103498588
DNA repair and recombination proteins [BR:cmo03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase II complex
      103498588
SSDB
Motif
Pfam: RNA_pol_Rpb4
Other DBs
NCBI-GeneID: 103498588
NCBI-ProteinID: XP_008459458
UniProt: A0A1S3CA78
LinkDB
Position
9:1398343..1402001
AA seq 138 aa
MSGEEEENAAELKIGDEFLKAKCLMNCEVSLILEHKYEQLQQRAEDPTNQISQVFEKSLQ
YVKRFSRYKNPDAVRQVREILSRYQLAEFELCVLGNLCPETVEEATSIVPSLKTKGRVHD
DEAIEKMLNDLSLIKKFE
NT seq 417 nt   +upstreamnt  +downstreamnt
atgtctggagaagaggaagaaaatgctgcagagcttaaaattggggatgagttcttaaaa
gctaagtgtttaatgaattgtgaggtttctttgatcctggaacacaagtatgagcagctt
caacaaagggccgaagatccaacaaatcaaatttctcaagtgttcgagaagtcactgcag
tatgtgaaacgcttcagtcgctacaagaaccctgatgctgttagacaagttcgagaaatt
ctaagcagatatcaactagctgagttcgagttatgtgttcttggcaacctttgccctgaa
actgtggaggaagctacttccatagttccatctttgaagactaaaggaagagtgcatgac
gacgaagcaatagagaagatgttgaatgatctttcattaatcaaaaagtttgagtag

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