Cucumis melo (muskmelon): 103498602
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Entry
103498602 CDS
T03195
Name
(RefSeq) autophagy-related protein 18c
KO
K22991
WD repeat-containing protein 45
Organism
cmo
Cucumis melo (muskmelon)
Brite
KEGG Orthology (KO) [BR:
cmo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cmo04131
]
103498602
Membrane trafficking [BR:
cmo04131
]
Autophagy
Other autophagy associated proteins
Others
103498602
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PROPPIN
WD40_WDHD1_1st
WD40_Prp19
WD40
Beta-prop_Vps41
WD40_CDC20-Fz
Beta-prop_EML_2
Beta-prop_IFT140_2nd
Beta-prop_WDR90_POC16_2nd
Beta-prop_EML
ANAPC4_WD40
BCAS3_WD40
WDR55
Beta-prop_IFT80_2nd
Motif
Other DBs
NCBI-GeneID:
103498602
NCBI-ProteinID:
XP_008459480
UniProt:
A0A1S4E2D3
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Position
9:1227770..1231724
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AA seq
392 aa
AA seq
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MSGDQEEPSEVGVDRNGNKELELHSVFWNQDYSCFAAGTSCGFRIYNCDPFRETFRRELG
IGGFKIVEMLFRCNILALVGTGTNSLYPPNKVLIWDDYKSECIGEFSFRSEVRAVKLKRE
HFIVVLEHKIYVYTLKDVKLLDQIETVANPKGLCCLSHHVNTFVLACPGVQRGQVHIEHF
GLNMKKLFNAHDSHIACMTLTMDGLLLATASTKGTLIRIFNTLDGTLLQEVRRGVDRAEI
FSLALSPNVQWLAAASDKGTVHVFSLRVRVAGPDSSSDTNVIQGPTPFQQNSSNSIDTLV
PLNTGSNPSSSLSFMRGVLPRYFSSEWSFAQFHLPEVTQFIAAFGPQNTIIIVGMDGSFY
KCSFDPVRGGQMLQQVCVQFLKMEIGADRIDL
NT seq
1179 nt
NT seq
+upstream
nt +downstream
nt
atgtcgggtgatcaggaggaaccctcggaagttggagttgaccgaaatggaaataaagaa
ctagaacttcattcagtgttctggaatcaagactatagttgttttgctgctggtacaagt
tgcggctttcgtatttacaattgtgatcctttcagagaaacatttagacgtgagctggga
attggtggattcaaaattgttgagatgttgtttcgttgcaacattttagcacttgtgggg
actggaactaattctttatatccaccaaacaaagttttgatatgggatgattataaaagt
gaatgcattggtgaattttcatttaggtctgaggttcgagctgtaaaactgaaacgtgaa
cactttattgttgttcttgagcataaaatttatgtttacacgctgaaggatgtcaagctt
cttgatcagattgagactgttgctaatccaaagggcctatgttgtctttcccaccatgta
aatacatttgtgctggcatgtcccggtgttcaacgtgggcaggtgcatatcgaacatttt
gggctaaatatgaagaagctattcaatgcacatgattctcatattgcatgtatgacgctg
acaatggatggtctacttcttgcaactgctagcactaagggtactttgataagaattttc
aatacattggatggaacgctcttgcaagaggtacgaaggggagtggatagagcagaaatc
ttcagtcttgctctttccccaaatgtccaatggttggcagcagcaagtgataaagggact
gttcatgttttcagccttagagttagagtggctggcccggattcatcttctgatacaaat
gtaattcaggggccaacaccgttccagcaaaattcttctaattccattgacactcttgtt
cctttgaataccggttcaaaccctagttcgtcattgtcattcatgagaggggtcctacca
agatacttcagttcagaatggtcatttgctcagttccatttgccggaggtgactcagttt
attgcagcattcggacctcaaaacactattattattgttggcatggatgggagtttctac
aagtgtagttttgatccagtgcgaggagggcaaatgttgcagcaagtatgcgtccagttc
ttgaaaatggaaataggtgcggatcgaattgatctgtaa
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