Cucumis melo (muskmelon): 103498868
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Entry
103498868 CDS
T03195
Name
(RefSeq) protein ESSENTIAL FOR POTEXVIRUS ACCUMULATION 1
KO
K18730
PERQ amino acid-rich with GYF domain-containing protein
Organism
cmo
Cucumis melo (muskmelon)
Brite
KEGG Orthology (KO) [BR:
cmo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cmo03019
]
103498868
Messenger RNA biogenesis [BR:
cmo03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
103498868
Surveillance factors
Other surveillance factors
103498868
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GYF
Motif
Other DBs
NCBI-GeneID:
103498868
NCBI-ProteinID:
XP_008459882
UniProt:
A0A1S3CCF5
LinkDB
All DBs
Position
11:complement(32362150..32371111)
Genome browser
AA seq
1635 aa
AA seq
DB search
MADGKFDLPDDLLSSRPSDHSWTPKASGGNDEEKVLSGFLDESKDSVASENSIPLSPQWL
YAKPSETKEVRAPTPVSLANSTDLNQKEGWRPDGSEDKKDWRKSTSENESGRRWREEERE
TGLLSGRRRKTERRMDNMSTKETLEGRVLPNSDRWHDGRTSGHDSRTSGHDSRTSGHDNR
TSGHDSRTSSHDARRDNKWTLRWGPDDKEKESRMDKRSDADKEDVRSDSQSVSSNRPASE
RESESRDKWRPRHRMESHSAGATSFRAAPGFSLERGRGDGGSNLGFTIGRGRGNTIGRSS
TGLIGVPHLDKIENVPGKPRYSSHAFCYPRGKLLDIYRRQKSDPSFSDMPDDMEELQPLT
QPSVVEPLAFVSPDAEEESTLGDMWKGKITSSGVVYNSHTKGKPTESVLGDVDSIDGYQA
ALDLTLESENIAETPIEDISDVGHEVTNDEAFQDAIDGSIWSHPSMRDVLDGKYVSHKEE
EIRSSAISMPDSRGLAHTVSTAASLRVMEIGSGLPGTQLNADSDHKRPQNFDEIEFANSF
DVKSKLSDDPSSIFFIPFSEQNPNRSSDVKSEELSLFYLDPQGVIQGPFIGADIILWYEQ
GFFGLDLPVRLADAPESPFCELGEVMPHLKVREGSVDCADGKSLSGQSGASGGIIETSLP
SKHPALDMNDASTTNEVHRTLAELRSLSNQHIASGMSEAEAPFQLHAKGQSFHDVVAQDE
EIVFSGRPGNDGYQFPNSPGVLPMVNSISQPSLLNELSDRSLPVQNENKLHPFGLLWSEL
EGTNMKPVEVTNSKHTKSVNNMPSSMVRTTSLVGKPEVPLNAETWLDVYRRSMHSDQGVY
QEANVAHSLPHIEQESNRFDLADQLMSHQYHQALQQRNLLSHTNEATLDHHMQQQNLIHQ
QQLLANRSTPDLDHFLNLQMQQQQQRQLQLQHQLQQQQLQQQQKLLQEQHQSQVQQALLE
QLLRRQMHDSGLGQSRIDPIRANNALDQVLMEQHLLHELQQQQSHHQQRSVDPSFEQLIK
AKFGHLPPHQEQRDLSELLSRVQHGHIQSLDNQLAHQDVLQSRQLSMALRQRASMEDKRH
VCGPIWPEDEADQQFFRGHAGTQRLPTSGFELYQHQQRQAHADQLNHLEHNLSFQDRFRL
GLYEPASLPLERSISYPDVAQGMNLDVVNAMARARALELQESSAHNPPGGQLVGQYAPGA
IPQNHHHSLVSNQFHVSHFDGAEGNWSEKNERLGNEWMESRIQQRHININAEQQKRELEA
KMISEDPTLWMSDGLNDEKSKQLLMDLLNQKSVHQPTEPLDVGSGASFNRGSSGLYSGSG
SLEQSFVLHSGKERGMNNTLPVGSYGSNAYEPLQDEHPGNLSLTSNEKVPYRSDSVSAVK
GASILSGLKANGSINSSSSSMATAGNLSMTRDVLEVEGRARGLKGEGLVKTQAFQIQESM
LDLVASGDRGEFAMDTHTLSRHSSLGSAGFHNEKIANTFPEEVAKDPVTIHNKDSTSLKR
PPVSRTSASQDGLSVLIPDPVVRGKNSDGGRPDPTSILVNQENMAAMKKEMRFRRSSSCS
DSDVSETSFIDMLKKTAPQESHLTTAGVPEPSDGMQGGKGGKKKGKKGRQIDPALLGFKV
TSNRIMMGEIQRLDD
NT seq
4908 nt
NT seq
+upstream
nt +downstream
nt
atggccgacggcaagttcgatctccccgacgatcttctttcctctcgcccttctgatcac
tcctggacccccaaagcttctggagggaatgatgaggagaaggtgctctcgggtttcctt
gatgagtctaaagactctgtggcttcagagaacagcatacctttgtcccctcaatggcta
tatgccaaaccaagtgaaactaaggaagtgcgtgctccaacaccagtatctcttgctaac
tcaactgatctcaatcagaaagagggttggcgccctgatgggtctgaggacaagaaggat
tggaggaagagtacatctgaaaatgaaagtggccgccgttggagagaggaagagcgagaa
actggcttacttagtggtcgccgcaggaaaactgagagacgcatggataacatgtcaact
aaggagacattggagggtagagtcctccctaattcggacagatggcacgatggtcgcact
tctgggcatgatagtcgcacttctggtcatgacagtcgtacttctggacatgataaccgt
acttctgggcatgacagtcgtacttctagtcatgatgcacggcgtgacaacaaatggacg
ttgagatgggggcccgatgacaaagaaaaggaatcacggatggacaagcgatcagatgct
gataaggaagatgttcgcagtgacagtcaatcagtgagtagtaatcgccctgcttctgag
cgtgaatctgaatcgcgtgataaatggaggcctcgccataggatggaaagccattctgct
ggcgcaacttcctttcgtgctgcacccggattttcacttgagagagggcggggagatggg
gggtctaatttgggatttacaattggaagaggaagaggaaataccattgggagatcgtct
actggtctcattggagtaccacacttggataagattgaaaatgttcctgggaaaccaaga
tactcatctcatgctttttgttaccctaggggtaagcttctcgacatatataggaggcag
aaatctgatccatcgttctcggatatgcctgatgatatggaagaattgcagcctttgact
caacctagtgttgtagaaccattggcttttgtttctccggatgctgaagaggagagtacc
cttggtgacatgtggaaggggaaaatcaccagtagcggggttgtttacaattcacatacg
aaggggaagcctactgaatctgttttaggagatgtagactccatagatggatatcaggct
gcgctggatttgactttagagtccgagaatatagcagaaactccaattgaagatatttct
gatgtgggtcatgaagttacaaatgatgaagcattccaagatgccattgacgggagcatt
tggagtcatccttcaatgagagatgtcctagatggaaaatatgtgagccataaggaagag
gaaataaggtctagtgccatttctatgccagactctcgtggattggcccacacagtttct
acagcagcctcgctacgtgtgatggagattggcagtgggctacctggtactcagctaaat
gcagattctgatcataaaaggcctcagaactttgatgaaattgagtttgccaattcgttt
gatgtcaaatccaagctttctgatgatcctagttctattttctttattcccttctctgag
caaaatccaaacagaagttctgatgtgaaatctgaggagctgagtttgttctatcttgat
cctcaaggggttatacaggggccttttattggggctgacatcatcttgtggtatgaacaa
ggtttctttgggttagacctgcctgttcggttggcagatgcccctgagtccccattttgt
gagttgggggaggttatgccacatttgaaagttagagagggaagtgttgattgtgctgat
gggaaatctctttcaggccagtctggtgcctcaggaggaataatagagaccagtttacct
tctaagcatccggcacttgatatgaatgatgcgtctacaacaaatgaggttcatcgaaca
ctcgctgaattacgtagcctgtccaatcaacacatagcatctggaatgtctgaagctgaa
gcaccatttcaattgcatgccaagggtcaaagctttcatgatgttgttgctcaggatgaa
gaaattgtgttttctggaagacctggaaacgatggttaccaatttcccaactctcctggg
gtgctgcctatggtgaattctatcagccagccttctcttttgaatgagttaagtgatcgc
agcctgcctgttcagaatgaaaataagttgcacccttttggattgctgtggtctgagttg
gaaggtacaaatatgaaaccagttgaagtcacaaattcgaaacataccaagtcagttaat
aacatgccttcaagtatggtaagaaccacatcgttagttgggaagccggaagtacctctt
aatgcagagacttggcttgatgtatacagaagaagtatgcattctgaccagggtgtatac
caggaggccaatgttgctcattccttgccacatatagaacaagaatctaataggtttgat
ttggcagatcaactcatgtcccaccaatatcatcaggcacttcaacagcggaatttattg
tctcacactaacgaagctactttagatcatcatatgcaacaacagaatcttattcaccag
cagcagctgttggctaatagaagtacacccgatcttgatcatttcttgaacctgcagatg
caacagcaacaacaacggcagctgcagttacagcatcagttacagcagcagcagttgcag
cagcagcaaaagcttttgcaggaacaacatcagtctcaagtccagcaggcactgcttgaa
cagttgttgcgtcgacaaatgcatgattcgggccttgggcagtcacgtattgatccaatt
agagccaataatgctcttgatcaggtgttaatggagcaacatcttttacatgagctacag
cagcaacaatctcatcatcaacaaagatctgttgatccatctttcgagcagcttatcaaa
gcaaagtttggtcacttgccaccacaccaagaacaaagagatttgtctgaattattatct
cgggttcagcatgggcacattcaatcattggataatcaacttgcccaccaggatgtgcta
cagtcgagacaattgtctatggcattaaggcagagggccagtatggaggacaagagacat
gtttgtggtcctatctggccagaggatgaggccgatcagcagtttttcagaggacatgct
ggcacacaacgtttaccaacgtcaggatttgaattataccagcatcaacagaggcaagct
catgcagaccagttgaatcaccttgagcacaacctttcctttcaagatcggtttaggcta
ggtctttatgagcctgcttcacttccactcgagagatcaatatcctatcctgacgttgct
caggggatgaatctggatgtagttaatgctatggctcgtgctcgggctttagaattgcaa
gaatccagtgcacataatccacctggcggtcaactggtggggcaatatgcacctggtgcc
attccacagaatcatcatcactctctagtcagtaaccagtttcatgtttcacatttcgat
ggagctgaaggcaactggtctgagaaaaatgagcgacttggaaatgaatggatggagtct
cggattcaacaaaggcatatcaatatcaacgctgagcaacagaaaagggagttggaggct
aaaatgatttctgaggatccaactttatggatgtcagatggacttaatgatgagaagtca
aagcagttattaatggacctactcaatcagaaatctgttcatcaacccacagaacccctg
gatgtaggaagtggagcatctttcaatagaggatcatctggcctctattctggatcaggc
tctcttgaacagtcgttcgttcttcattcaggcaaggaaagaggtatgaacaacacattg
ccagtggggtcttatggttctaatgcttatgaaccactgcaagatgagcatcctggcaac
ttgagcttgacaagcaatgagaaggtcccatacaggtcggattctgtatctgctgtcaag
ggagcatcgattttgtctggtcttaaagccaatggttcaattaacagctctagttctagc
atggctaccgctggtaacctttctatgactagagacgtcttggaggtggagggtagggca
cgaggattgaaaggtgagggtttggtgaaaactcaagcctttcaaattcaagaaagcatg
cttgacctagtagcatctggtgatcgtggggaatttgcaatggatactcatacccttagt
cggcattcgtctcttggttctgctggctttcacaatgaaaaaattgctaatacgtttcca
gaagaggttgctaaagacccggtgaccattcacaacaaagatagtacttcgttgaaacgc
cctcctgtctcacgcacttcggcatcccaggatggattgtctgtcctgattcctgatccg
gttgttagaggaaagaactcagatggtggaagaccggacccaactagtatcttggtgaac
caagaaaacatggcagccatgaagaaagagatgcgtttccggcgctcttcttcttgtagt
gacagcgacgtgtcagagacttcttttatcgatatgctgaagaagacagctccacaagaa
tcccatttgacaacggcgggagttccagagccatctgatggaatgcagggagggaaaggt
gggaaaaagaaagggaagaaggggagacagatagatcccgcactactcggattcaaagtc
accagcaaccgaattatgatgggtgaaatccaacgcttagacgattga
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integrated database retrieval system
