Cucumis melo (muskmelon): 103499508
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Entry
103499508 CDS
T03195
Name
(RefSeq) ABC transporter A family member 1 isoform X1
KO
K05643
ATP-binding cassette, subfamily A (ABC1), member 3
Organism
cmo
Cucumis melo (muskmelon)
Pathway
cmo02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
cmo00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
103499508
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
cmo02000
]
103499508
Transporters [BR:
cmo02000
]
ABC transporters, eukaryotic type
ABCA (ABC1) subfamily
ABCA1, 2, 3, 4, 7, 12, 13 subgroups
103499508
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
ABC2_membrane_3
AAA_21
R1_ABCA1
RsgA_GTPase
AAA_29
Motif
Other DBs
NCBI-GeneID:
103499508
NCBI-ProteinID:
XP_008460746
UniProt:
A0A1S3CCN6
LinkDB
All DBs
Position
8:complement(16521996..16599772)
Genome browser
AA seq
1901 aa
AA seq
DB search
MRPAWRQLKVMLRKNWLLKIRHPFITSAEILLPTVVMLLLIAVRTQVDNTVHPPQPHIQK
GMFVEVGKGISPSFQEVLVSLQKNGEYLAFAPDTVETKTMLHLMSLKFPLLEVVTRVYKD
EQELEAYIRSDLYGNCNVAKNLNCSNPKIKGAVVFHEQGPELFDYSIRLNHTWAFSGFPN
VRSIMDMNGPYLNDLEPGATNIPTMQYSFSGFLTLQQVMDSFIIFASQEMETNILHVNSK
HTLSNFSSRTSLLNMPWTQFSPSKIRIAPFPTREYVDDEFQSIVKKVMGVLYLLGFLYPI
SRLISYYAFEKEEKIKEGLYMMGLKDWIFHLSWFISYAVQFSISAGIITFCTMHNLFKYS
DKTVVFIYFFSFGLSAIMFSFLISTFFNRAKTAVAVGTLSFLGAYFPYYTVNDETVSMIV
KTTASLFSPTAFALGSINFADYERARVGLRWSNLWRASSGVNFLVCLLMMFFDALLYCAV
GLYMDKVLLRENGFGCSWRCFLRNFFSKKRTIVENQTPVECKIADAEIANASRNDAFDSV
VEAISLEMKQQELDGRCIQIRNLHKVYDTKMGKFCAVDNLQLTLYESQILALLGHNGAGK
STTISMLVGLFPPTAGDALVLGKNIITDMEEIRKGLGVCPQNDILFPELTVREHLEIFAT
LKGVKEDFLERTVVDMVNEVGLADKINTPVNALSGGMKRKLSLGIALIGDSKVIVLDEPT
SGMDPYSMRLTWQLIKKIKKGRIILLTTHSMDEADELGDRIAIMANGSLKCCGSSLFLKH
QYGVGYTLTLVKSAPTVSVAADIIYRHIPSAVCVSEVGTEVSFKLPISSSSSFESMFREI
ENYMRRSVSNSAINYSLETSTDVQKDHLGIDSYGISVTTLEEVFLRVAGCDLDVAPCEQK
ESSLLTGSVVTDISVHHVPSKISGSQHFWKSEKSGFLALAVKRACGLIFSTVFSIINFLN
LGCCECDLLWRSKFWQHTKALFIKRAITARRDRRTVVFQLLIPVLFLFVGLLFLKLKPHP
DQQSVTLTTSEFNPELIGGGGGGPIPFDLQWHISKQVAHYIEGGWIQKYKPSAYKFPDTE
KALSNAIEAAGETLGPTLLSMSEYLMSSFNKSYQSRYGAIVMDDQNSDGSIGYTVLHNCS
CQHSAPTFINIVNAAILRLATGDQNMTIQTRNHPLPMTKSQRLQRHDLDAFSAAIIINIA
FCFIPASFAVSLVKERETKAKHQQMISGVSMLSYWISTYLWDAISFLVPTCLALVLFYIF
GMDQFIGKGRFLATAIIFLEYGLAIASSTYCLTFFFLDHTVAQNVVLSVHFFTGLILMVI
SFIMGLIETMAKTNSFLKNFFRISPGFCFADGLASLALLRQGMKDKTSEGVYDWNVTGAS
ICYLGIQFLCYFLLTLGLELLPLHKLTAITVKEWWMKCWRNNLINLKAETSSPSLEPFLA
PSSNYVIPDFDLDVDVAAERNRVLSGSIDNAIIYLSNLRKVYPGENYLHKKIAVDSLTFS
VQEGECFGFLGTNGAGKTTTLSMLTGEESPSEGTAFIFGKDIRTNPKAARCDIGYCPQFD
ALLEFLTAKEHLELYARIKGVPELQIDDVVLEKLVDFDLLKHANKPSYSLSGGNKRKLSV
AIAMIGDPPVVILDEPSTGMDPIAKRFMWDVISRISTRRGKTAVILTTHSMNEAQALCTR
IGIMVGGRLRCIGSPQHLKTRFGNHLELEVKPHEIHSEDLYNFCQHIREGFFDFPSHPRS
LLNDIEVCIGAIEPITPENQSVSEITLSRQMLTIIGRWLGNEERIKTLVSSSTAPGVFGE
QLTEKLFRDGSIPLPIFSEWWLATEKFSEINSFILSSFSGATFHGCNGLSMKYQLPYGED
GLSLADAFGHIERNRKQLGIAEYSLSQSTLETIFNHFASDS
NT seq
5706 nt
NT seq
+upstream
nt +downstream
nt
atgagacctgcatggaggcagctcaaggttatgctccgcaagaactggctcctcaaaatt
cgccaccctttcatcacctctgcagagattttacttccgactgtggtgatgttgttactg
atagccgtaaggacgcaagttgataacacagtccatcctccgcaaccgcatatacaaaaa
ggaatgttcgtagaagttggcaaaggcatatctccaagtttccaagaagttttggtgtca
ctgcagaaaaatggagaatatttggcttttgcaccagacacagtcgagacaaagaccatg
ctacatttgatgtcattaaaatttcctcttttagaggtagttactagagtttacaaagat
gaacaagagctcgaagcctacattcgttctgatctatatggaaactgcaatgtagctaag
aacttgaattgttcaaatcccaaaattaaaggagccgtggttttccatgagcaaggtcca
gagttatttgattatagcattcgtctcaatcatacttgggctttctcaggatttccgaat
gttagatccatcatggacatgaatggtccgtatctcaatgacttggaaccgggtgcaact
aatataccaacaatgcaatatagcttcagtggatttttaactcttcagcaagtcatggat
tcatttataatatttgcttcccaggaaatggaaactaatattctccatgtaaatagtaaa
catactttatcaaacttctctagtagaacttcattgctgaacatgccctggactcaattt
agcccttcaaaaatacgaattgcccctttccctactcgggagtatgttgatgatgaattc
caatctattgtcaagaaagtgatgggtgtgttgtatctgttgggatttctgtacccaatt
tctcgccttatcagctattatgcatttgagaaggaagagaagatcaaagaaggcctctac
atgatgggtctgaaagattggatatttcatctctcttggtttatttcatatgctgtgcag
ttttcaatatctgctggaattatcactttctgcacgatgcataaccttttcaagtacagt
gataagacagtggtcttcatctatttcttttcatttggattaagtgcaatcatgttttca
tttttgatctctacattcttcaatcgagcgaaaactgctgtggcagtgggaacactttca
tttctaggtgcctattttccttactataccgtaaatgatgaaactgtgtccatgatagtg
aagacaactgcttcattgttttcaccaacggcctttgctctaggttctattaactttgca
gattatgaacgtgctcgtgttggacttcgatggagcaacctgtggagggcatcctctgga
gtaaactttttggtgtgtcttttaatgatgttctttgatgcgctgttgtactgtgcagtt
ggtctttacatggataaggttcttttaagggaaaatgggtttggttgttcatggagatgc
tttctccgcaatttcttctcgaaaaaaaggactattgtagaaaatcagactcctgtagaa
tgtaaaattgctgatgcagaaattgctaatgcgtctagaaatgatgcctttgattctgta
gtggaggctataagtttggaaatgaagcaacaagagctcgatggcagatgcatccagata
agaaatcttcataaagtttatgatacaaagatggggaaattttgtgctgtggacaattta
caactcaccctctatgaaagtcagattctagcgcttttagggcataatggagctgggaag
agtacgacaatatccatgcttgtaggtctctttcctcctactgctggggatgctcttgtg
cttggcaagaatattataacagatatggaagagatacggaaagggctgggtgtgtgtccc
caaaatgatattctcttcccagagttgactgtacgagaacatttggaaatatttgccaca
ttgaaaggagtaaaagaagattttttggaaaggactgtcgttgatatggttaatgaagtt
ggcctggctgataaaattaacactcctgtcaatgctctttctggtggcatgaagcggaaa
ctatccctaggaattgcgttgataggggacagcaaggttatcgtgcttgatgagcctaca
agtggaatggatccatattctatgcgcttgacatggcaattaattaaaaagataaaaaaa
ggtaggatcatattgctaacaacacactcgatggatgaagctgatgaactgggagatcgg
atagccattatggctaacggatctctaaaatgttgtggaagttctcttttcttaaagcat
cagtatggagtcggttatactcttactctagtgaagtctgcacctactgtctctgttgct
gcagatatcatctatcgccacattccatcagcagtttgtgtgagtgaggttgggaccgag
gtctcctttaagcttccaatatcatcctcttcttcatttgagagcatgtttcgggaaatt
gaaaattacatgcgaagatcagtttctaattctgcaattaattattctttggagactagt
actgatgttcaaaaagaccatcttggaattgatagttacggtatatctgttaccactctt
gaggaagtattcctaagagttgctggatgtgatttggatgttgcaccctgtgagcagaaa
gaaagctccctccttacgggttctgtggttacagatatttctgttcatcacgtgcctagc
aaaatctctgggtcccagcatttttggaaatctgaaaagtctggtttcttggctcttgca
gtaaaaagagcgtgtggtttgatattttcaacagttttcagtattattaactttctgaat
ttaggatgctgtgagtgtgatttgctatggagatcaaagttctggcaacatacaaaagca
ttatttattaagagggccataactgctcgtagagaccgcagaacagttgtattccaactt
ttgattcctgttctgttcttgtttgttggtcttctctttcttaaactcaagccacatcca
gaccagcagtcggtgactttgacaacttcagaatttaatccagaattaattggtggtggt
ggtggtggtccaattccttttgatctgcagtggcatatttccaagcaggttgcacattat
attgaaggtggttggattcaaaaatataaacctagtgcttataagtttcctgatactgaa
aaagcattgtccaatgcaatagaagcagcaggagaaacgcttggaccaactctactatcc
atgagcgaatatctgatgtctagcttcaacaaatcctaccaatcaaggtatggagcgatt
gtaatggatgatcagaatagtgatggcagtataggatatacagtactgcacaattgttct
tgtcagcattctgctccaacctttatcaatatagtgaatgctgcaattctaaggcttgct
actggtgaccagaatatgactattcaaacacgaaatcaccctctccccatgacaaaaagc
cagcggttgcagcgacatgatctggatgctttttctgctgctatcatcattaatatagca
ttctgtttcattcctgcatcgtttgctgtctctcttgtgaaggaacgtgaaacaaaagct
aaacaccagcaaatgatcagtggggtttcaatgctttcatactggatatctacttaccta
tgggatgcaatcagtttcttggttcctacttgtttagcacttgtactcttttacatcttt
ggtatggatcaattcattggtaaaggtagatttcttgcaacggctattatatttttggaa
tatggactggccattgcatcatcaacatattgccttacatttttctttttggaccatact
gtggctcagaatgtggttttgtcggtgcactttttcactggacttattcttatggttatt
tcattcattatggggcttattgaaactatggcaaaaacaaattcttttcttaagaatttt
ttcagaatatcacctgggttttgtttcgctgatggacttgcttcattggctcttcttcgg
caggggatgaaagataaaacaagtgagggggtttatgattggaatgttaccggtgcctca
atttgttatctcggtatacagttcctgtgttactttctcttaacccttggtctcgaactg
ttgcctctccataaattgactgccattacagtcaaggaatggtggatgaagtgttggagg
aacaatctcataaatcttaaagctgaaacttcatctcccagcttggaaccttttcttgca
ccttcttcgaattatgttattcctgactttgatctcgatgtagacgtggcagcagaaaga
aatagagtcctatcaggctctattgacaatgccattatctacttgagtaatcttcggaag
gtatatcctggagaaaattatctccacaagaaaattgcggtggattctttaactttttca
gttcaagagggagaatgctttgggtttttaggcacaaatggtgcggggaagacaacaact
ctgtcaatgcttactggagaagaatctcccagtgagggaactgctttcatttttggaaaa
gatatacgaaccaatcctaaggctgctcgttgtgatattggatattgcccacagtttgat
gctttattagagttccttactgcaaaggaacacctagaactttatgctagaataaaaggt
gttccagagttgcagatagatgatgtcgttttggaaaaattggtggactttgacttgctg
aagcatgccaataaaccatcttattcactcagtggtggaaacaaacgtaaactctccgtt
gcaattgcaatgattggagatccacctgtcgttattcttgatgagccatccacagggatg
gatcctattgccaaacgattcatgtgggatgttatatcccgaatatctaccaggagagga
aagacagctgttatcctcaccacacatagcatgaatgaagctcaagcactttgcactcgt
attgggataatggttggaggacggctacgctgcataggaagtccccaacacttgaaaaca
cgatttggcaatcatcttgagctagaggtcaaacctcatgaaatccactcagaggacctg
tataacttttgccaacatattcgtgaggggttttttgattttccttcacacccgagaagc
ttattgaatgacattgaagtttgtatcggagctattgaacccatcacaccagaaaaccaa
tcagtgtcagagattactttgtctaggcaaatgttaaccataatcggacgttggcttgga
aatgaagaaaggataaaaacacttgtatcctcgtctactgctcctggagtttttggtgaa
cagttaacagagaaattgtttcgagatggcagcataccgttgcctatattttccgaatgg
tggttagcgacagagaagttctcggagattaactcgtttattctctcttcattttcgggt
gcaacattccatgggtgcaatggattaagtatgaaatatcagttgccttatggggaggat
ggcctctcgcttgcagatgcttttggacacatagagagaaaccgaaagcagcttggaatt
gccgaatacagtctcagccaatcaacgttagagacgatttttaatcactttgcatcggat
tcttaa
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