Cucumis melo (muskmelon): 103499535
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Entry
103499535 CDS
T03195
Name
(RefSeq) uncharacterized protein LOC103499535 isoform X2
KO
K12586
exosome complex component RRP43
Organism
cmo
Cucumis melo (muskmelon)
Pathway
cmo03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
cmo00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
103499535
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cmo03019
]
103499535
Messenger RNA biogenesis [BR:
cmo03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
103499535
BRITE hierarchy
SSDB
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Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
SPRY
Motif
Other DBs
NCBI-GeneID:
103499535
NCBI-ProteinID:
XP_008460772
UniProt:
A0A1S3CD66
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Position
8:15869152..15898772
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AA seq
316 aa
AA seq
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MKKEAKKIIVQTMGLPNAASGDLSSQMEVDAFRRLFPIQFYERHLAESIRPDGRALGKAR
DTTIALGPVSSANGSALAKIGSTTMLAAIKMEVMTPSVESPDEGCIALDFHMPPVCSPIV
RPGRPAEAAPVISKQLSDTISSSGMIDLRELSLVKGKAAWMAYLDIYCLDADGSLFDAAL
LSAAAAFSHLQIPVVALNDDGRVVFVSEEEGGENFEKEPVNKEKRKLKLNSVPFSLTCLL
HKKYILADPTAEEESVMETIVTVVLDSSGQLVSFYKPGGSVLAYTSAVQDCIALTRQRSK
ELQIILDEAISGMEID
NT seq
951 nt
NT seq
+upstream
nt +downstream
nt
atgaagaaagaggcgaagaagattatagtacaaacaatgggactgccaaatgctgcttct
ggggacttgtcgtcgcaaatggaagtcgatgcttttagacgactctttcctattcagttt
tatgagcgccatcttgctgaatcaatacgtcctgatggaagagcactgggaaaagctaga
gacacaaccattgctcttggaccagtatcttctgcaaacgggtcagcccttgctaagatt
ggttcgacgacaatgttggctgctattaaaatggaagtaatgacaccttctgtagagtca
ccggatgagggttgcatagctcttgatttccacatgcctccagtatgctctccaatcgtt
aggcctgggagaccagcggaagcagcacctgtgatttcaaagcagttatctgacactatt
tcgagttctgggatgattgatctgagagaactatctcttgttaaaggaaaagctgcttgg
atggcttacttggatatttactgtttggacgctgatggttctctttttgatgctgcactt
ctttctgcagcagctgcattttctcatttgcaaatccctgttgttgctctaaatgatgat
ggaagagtagtatttgtctctgaggaagaagggggagaaaactttgagaaggaacctgtc
aataaagagaaaaggaaactgaaattgaactccgttcctttctcattaacatgcctactc
cacaagaagtacatcttggccgatcctactgcagaggaggagtccgtcatggaaactatt
gtaactgtggttttggattcatctggtcaactggtttccttctacaagccgggtggttcc
gttcttgcttatacatcagctgttcaggattgcattgccttgacaagacaaagatcgaaa
gaactacagataattttagatgaagcaatttctggtatggaaatcgactaa
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