Cucumis melo (muskmelon): 103499711
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Entry
103499711 CDS
T03195
Name
(RefSeq) coatomer subunit alpha-1-like
KO
K05236
coatomer subunit alpha
Organism
cmo
Cucumis melo (muskmelon)
Brite
KEGG Orthology (KO) [BR:
cmo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cmo04131
]
103499711
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
cmo04147
]
103499711
Membrane trafficking [BR:
cmo04131
]
Endoplasmic reticulum (ER) - Golgi transport
Retrieval pathways
Coat protein complex I (COP-I)
103499711
Exosome [BR:
cmo04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
103499711
Exosomal proteins of bladder cancer cells
103499711
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
COPI_C
B-prop_COPA_B_2nd
WD40
WD40_Prp19
WD40_WDHD1_1st
WD40_CDC20-Fz
WDR55
Beta-prop_EML_2
TPR_COPA_B
EIF3I
Beta-prop_TEP1_2nd
Beta-prop_WDR90_POC16_2nd
Beta-prop_CAF1B_HIR1
Beta-prop_TEP1_C
Beta-prop_EML
Beta-prop_WDR75_1st
Beta-prop_EIPR1
WD40_MABP1-WDR62_2nd
WD40_MABP1-WDR62_1st
ANAPC4_WD40
Beta-prop_DCAF4
Beta-prop_SCAP
Beta-prop_SPT8
WD40_RFWD3
Beta-prop_IFT122_1st
NBCH_WD40
Beta-prop_WDR19_1st
Beta-prop_RIG_2nd
Beta-prop_IFT140_1st
Zn_ribbon_19
Motif
Other DBs
NCBI-GeneID:
103499711
NCBI-ProteinID:
XP_008460997
UniProt:
A0A1S3CEY0
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Position
11:3529827..3535209
Genome browser
AA seq
1219 aa
AA seq
DB search
MLTKFETKSNRVKGLSFHSKRPWILASLHSGVIQLWDYRMGTLIDRFDEHEGPVRGVHFH
KSQPLFVSGGDDYKIKVWNYKTHRCLFTLLGHLDYIRTVQFHHEYPWIVSASDDQTIRIW
NWQSRTCISVLTGHNHYVMCASFHPKEDLVVSASLDQTVRVWDIGALRKKTVSPADDILR
LSQMNADLFGGVDAVVKYVLEGHDRGVNWAAFHPTLPLIVSGADDRQVKLWRMNDTKAWE
VDTLRGHMNNVSCVMFHAKQDIIVSNSEDKSIRIWDATKRTGLQTFRREHDRFWILSAHP
EMNLLAAGHDSGMIVFKLERERPAFAISGDSLFYVKDRFLRYYEFSTQKDTQVVPIRRPG
STSLNQSPRTLSFSPTENTILVCSDLDGGCYEFYTIPKDSFGRSDSLQDAKRGLGGSAVF
VARNRFAVLDKSHNQVLLKNLKNEIVKKVPIPITADAIFYAGTGNLLCRAEDRVVIYDLQ
QRIILGDLQTPFVKYVVWSNDMESVALLSKHAIIIANKKLVHQCTLHETIRVKSGAWDDN
GVFIYTTLNHIKYCLPNGDSGIIRTLDVPIYITKVSGNTLFCLDRDGTVRSLIIDATEYI
FKLSLLKKRFDHVMSMIRNSQLCGQAMIAYLQQKGFPEVALHFVKDERTRFNLALESGNI
QIAVASATAIDEKDHWYRLGVEALRQGNAGIVEYAYQKTKNFERLSFLYLITGNTAKLSK
MLKIAEVKNDVMGQFHNALYLGDVRERVKILENVGHLPLAYITASTHGLHDVAERLAAEL
GDDIPSLPEGKTASLLLPPTPVMCGGDWPLLRVMKGIFEGGLDNVGAGHAEEDDDEVADG
DWGEELDVVDVDGLQNGDVTAILEDEEGAEENEEEGGWDLEDLELPPEADTPKVSVSSRN
SVFVAPTPGLPANQVWTQRSSLAAEHAAAGNFDTAMRLLNRQLGIKNFAPLRPIFLDLHA
GSQTYLRAFSSAPIISLAVERGFSESSNTNAKGSPALIYSFSQLEEKLKAGYKATTTGKF
SDALRLFLSILHTIPLIVVESRREVDEAKELIIIVKEYVLGLQMELKRRELKDNPVRQME
LAAYFTHCNLQLPHLRLALLNAMTVCYKAKNLASAANFARRLLETNPSIENQAKTARQVL
QAAERNMTDASQLNYDFRNPFVTCGATYVPIYRGQKDVSCPYCSSRFVPSQEGQLCSVCD
LAVVGAHASGLLCSPTQNR
NT seq
3660 nt
NT seq
+upstream
nt +downstream
nt
atgctgacgaagtttgaaaccaagagtaatagagtcaaagggttgagtttccatagtaag
aggccatggatccttgcaagtcttcacagcggagtgatccagctatgggattaccggatg
ggcacgcttattgatagatttgatgagcatgaagggcctgttcgtggtgttcactttcac
aagtctcagcctctttttgtgtctggaggggatgattataagataaaagtgtggaactat
aagactcatagatgtctatttactcttcttggacacctggattatatacgtactgtgcaa
tttcaccatgagtatccatggattgtgagtgctagtgatgatcaaactattcgtatatgg
aactggcaatcacgtacatgtatctccgttttgacgggccacaatcactatgtaatgtgt
gcttcatttcaccctaaggaagatcttgttgtgtcagcttcccttgatcagaccgttcgt
gtttgggacattggtgccttgaggaagaagactgtgtctccagcagatgatatcttgcgg
ttgagtcaaatgaatgctgatctatttggtggggtcgatgctgttgttaaatatgtattg
gaaggtcatgatagaggggttaattgggcggcattccatcccaccctgccgttgatcgtg
tcaggggctgatgatcgacaagtgaaattgtggcgaatgaatgacacaaaagcatgggaa
gtggacactctaagggggcacatgaataatgtttcatgtgtgatgttccatgcgaaacaa
gatattattgtttccaattcagaggataaaagtattcgaatttgggatgctacaaaacga
actggacttcagacatttcgtagggagcatgatagattttggattctttctgctcatccg
gagatgaatttattggcagcagggcatgacagtggcatgattgtctttaagttggagaga
gaaagaccagcctttgctattagtggtgattctttattttatgtgaaggaccgctttttg
cgctattatgagttctccactcaaaaagatacacaggtcgttccgattcgccggcctggt
tcaactagcttgaatcagagcccaagaaccctttcatttagccctacggaaaacacaatt
ctagtttgctcagatctggatggggggtgttatgaattttacaccatacccaaggatagc
tttggtagaagtgatagcttgcaagatgcaaagagaggacttggaggatcagcagtgttt
gtagctcggaataggtttgctgtgctcgataaaagtcacaaccaagtcttgttaaaaaac
cttaagaatgaaattgttaagaaggtccctattcccattactgcagatgcaatattttat
gctggaactggtaatttattgtgccgagcagaagatagagttgttatttacgatcttcaa
cagagaataattcttggtgatcttcaaaccccttttgtcaagtacgttgtttggtccaat
gatatggagagtgtagcattgctgagcaaacatgcaattattattgctaacaagaagctt
gttcaccagtgcacacttcatgaaacaattcgcgtaaagagtggagcatgggatgataat
ggcgtttttatttacacaaccctaaaccacattaagtattgcctcccgaatggagatagt
ggtataatcagaaccctcgatgttccaatatatattacaaaggtgtctggcaatactctt
ttttgcttggatagggatggaacagttcgatcgttaattattgatgcaacagaatacata
ttcaaactttctctcttgaagaagagatttgaccatgtcatgagcatgataaggaactca
cagctctgtgggcaagcaatgattgcatatttgcaacaaaagggatttccagaagttgca
cttcacttcgtgaaggatgagagaaccaggttcaatttggctcttgagagtggaaatatt
cagattgcagttgcatctgctacagcaatcgatgaaaaagatcattggtataggctgggt
gtggaggctcttcggcaaggcaatgcaggcatagtcgaatatgcctaccagaagacaaaa
aattttgagaggttatcgttcctttatctcataactggcaacacagcaaaactatccaag
atgttaaagatcgctgaagttaagaatgatgtcatgggtcaatttcacaatgctctatat
cttggtgatgttcgtgagcgcgtaaagatcctggagaatgttggccacttacctcttgcg
tacatcacagcttctacccatggtttacatgatgtagctgaaaggctagctgctgaattg
ggagatgacattccatctttaccagaaggcaagaccgcatcccttctcttgcctcctact
ccagtcatgtgcggtggtgattggccacttctgagagtcatgaaaggaatatttgaaggt
gggctcgataatgtgggtgctggtcatgctgaagaagacgatgatgaagttgcagatggt
gattggggtgaggagctggatgtggttgatgttgatggcttacaaaatggagatgtgaca
gcaattttggaagatgaggaaggtgcggaagaaaatgaggaagaagggggatgggacctt
gaagatttggagctcccacctgaagctgacactccaaaagtatcggtcagttctcgcaac
tcagtttttgtggccccaactcctggcctgcctgccaaccaggtttggacacagaggtcg
tcccttgctgcagaacatgctgcggcaggtaattttgatactgcaatgcgcttgcttaac
aggcaactgggaattaaaaactttgctcctttgaggcccatatttcttgatcttcatgct
gggagtcaaacctatcttcgtgccttttcatctgctcccataatatcattagcagttgaa
cgaggattcagtgaatctagtaatacgaatgcaaagggatctccagcacttatttacagt
ttctctcagttggaagagaagcttaaagctggttacaaggccacaacaacagggaagttc
tctgatgctcttcgtctttttctttctattcttcataccatccctttgatcgtggtcgag
tctaggagggaagtggatgaggcgaaggagttaattattatcgttaaggagtatgttctg
ggtttgcaaatggaattgaagaggagagaactcaaggacaatccagtacgtcagatggag
cttgcagcctattttacgcactgcaaccttcagttgccacatttgaggcttgctctatta
aacgccatgactgtctgttacaaggctaagaacctcgccagtgcggcaaacttcgctcgc
agacttcttgagactaatccctcaattgagaatcaagctaagacagccaggcaagtactg
caggcagcagagaggaatatgacggatgcctcccaactgaactatgacttcagaaaccct
tttgtgacctgtggtgcaacttatgtaccaatttaccgaggtcagaaggatgtttcttgc
ccttactgtagttccaggtttgtgccaagtcaggaaggacaactttgctctgtttgtgat
ctagctgttgtcggagcacatgcatctggtttactttgttctcccacccaaaatcgatga
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integrated database retrieval system