KEGG   Cucumis melo (muskmelon): 103499918
Entry
103499918         CDS       T03195                                 
Name
(RefSeq) sm-like protein LSM2
  KO
K12621  U6 snRNA-associated Sm-like protein LSm2
Organism
cmo  Cucumis melo (muskmelon)
Pathway
cmo03018  RNA degradation
cmo03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:cmo00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    103499918
  09123 Folding, sorting and degradation
   03018 RNA degradation
    103499918
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:cmo03019]
    103499918
   03041 Spliceosome [BR:cmo03041]
    103499918
Messenger RNA biogenesis [BR:cmo03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    P-body specific factors
     103499918
  mRNA degradation factors
   5'-3' decay
    Lsm complex
     103499918
Spliceosome [BR:cmo03041]
 Complex B
  U4/U6.U5 tri-snRNP components
   LSm proteins
    103499918
 Complex C
  U2 snRNP components
    103499918
SSDB
Motif
Pfam: LSM SM-ATX DUF150_C
Other DBs
NCBI-GeneID: 103499918
NCBI-ProteinID: XP_008461281
UniProt: A0A1S3CDX8
LinkDB
Position
1:complement(34530073..34532059)
AA seq 93 aa
MLFFSYFKDLVGREVTVELKNDLAIRGTLHSVDQYLNIKLENTRVVDQDKYPHMLSVRNC
FIRGSVVRYVQLPPDGVDVELLHDATRREARGG
NT seq 282 nt   +upstreamnt  +downstreamnt
atgttgtttttctcgtacttcaaggatttggtgggcagagaggtgacagttgagttgaag
aacgacctagcaattagaggaaccctgcattctgtagatcagtatctcaacatcaaactg
gaaaacaccagggttgttgatcaagacaaataccctcacatgctctctgtgagaaactgt
ttcatcaggggatcagtggtgagatatgttcaacttccaccagatggtgttgatgtcgag
ttgttgcatgatgccaccagacgcgaggctcgaggtggctaa

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