Cucumis melo (muskmelon): 103500131
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Entry
103500131 CDS
T03195
Name
(RefSeq) transcription elongation factor SPT4 homolog 2
KO
K15171
transcription elongation factor SPT4
Organism
cmo
Cucumis melo (muskmelon)
Pathway
cmo03250
Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:
cmo00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
103500131
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cmo03021
]
103500131
03019 Messenger RNA biogenesis [BR:
cmo03019
]
103500131
Transcription machinery [BR:
cmo03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription elongation factors
103500131
RNA polymerase I system
103500131
Messenger RNA biogenesis [BR:
cmo03019
]
Eukaryotic type
mRNA processing factors
3' end processing
DRB sensitivity inducing factor (DSIF) complex
103500131
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Spt4
Motif
Other DBs
NCBI-GeneID:
103500131
NCBI-ProteinID:
XP_008461561
UniProt:
A0A1S3CFH1
LinkDB
All DBs
Position
6:complement(26194072..26200190)
Genome browser
AA seq
116 aa
AA seq
DB search
MASAPAQIPTSFGHELRACLRCRLVKTYDQFRESGCENCPFFKMDEDHERVVECTTPNFN
GIISVMDPARSWAARWLRIGRFVPGCYTLAVSEALPEDLQNLCEEERVQYAPPKRV
NT seq
351 nt
NT seq
+upstream
nt +downstream
nt
atggcaagcgcacctgctcaaattcctaccagcttcgggcatgagctccgagcttgtctt
cgttgtcgtcttgtcaaaacttacgatcagtttcgagaatcaggctgtgagaattgcccc
tttttcaagatggacgaagaccatgagcgtgttgtagaatgcacaacccctaattttaat
gggataatttcagtcatggatcctgccagaagttgggctgctagatggctgcgaattgga
agattcgttccaggttgttacactcttgcagtctcagaggctctccccgaggatttgcag
aatttatgtgaagaggagcgcgtgcaatatgcaccaccaaaacgtgtttaa
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