KEGG   Cucumis melo (muskmelon): 103500170
Entry
103500170         CDS       T03195                                 
Name
(RefSeq) protein RDM16 isoform X1
  KO
K12843  U4/U6 small nuclear ribonucleoprotein PRP3
Organism
cmo  Cucumis melo (muskmelon)
Pathway
cmo03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:cmo00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    103500170
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:cmo03041]
    103500170
Spliceosome [BR:cmo03041]
 Complex B
  U4/U6.U5 tri-snRNP components
   U4/U6 snRNP specific factors
    103500170
SSDB
Motif
Pfam: PRP3 Prp3_C
Other DBs
NCBI-GeneID: 103500170
NCBI-ProteinID: XP_008461606
UniProt: A0A1S3CF39 A0A9I9DTC6
LinkDB
Position
10:complement(5720141..5725970)
AA seq 923 aa
MDRVSEKEKSSKRSREERDRDHKHRSRDTEDKHLSKDEKHRESDRHHRRRHHRSDRDSKR
ERSHEPREHKHRRDRSPDEREGSQDRDFKRERSYELREERERSRDRDSSKREKSNEPRGL
REGSEERGKLREVRREESDNEREREGSFEPIQNSVRSNKRKERGGSEDRFDGGEKRARAS
EVGNEVNGAEMDEKKERRRFADGEKDDGANLSGRARRDRKRFEDRVKEEDNGGNVDEKHA
KVIEYKSKGDVGDGKVQFGGTTDEKRSLGNGSMVEPTDIPSASVPQNLLHPSPFLPIKVS
SISTTNENKGVSITRSHEVHGKSSTDGTSSTAGKSGNLSLDALAKAKKALQMQKELAEKL
KKIPLMKKVGGSSSANSSVVKLEEKAKPPTGVLGQLSTTNDATTLSTGVVSSSSTFPSAA
NALDGGMNVPAGLTSIPHIEAVKRAQELAARMGFRQDPEFAPLINLFPGNIATDVAVPQK
PTKVPVLRLDALGREIDEQGNVVNITKPSNLSTLKVNINKQKKDAFQILKPELDVDPDSN
PHFDERMGINKTKLLRPKRMSFQFVEEGKWSKEAETLKLRSKFGEAQAKERKEKQAQLAK
AKAAPDINPNLIEVSERVVKEKTKDPIPEIEWWDVPLLHSSTYEGLGDGFVADDKLRKDK
ITIYVEHPRPIEPPAEPAPPPPQPLKLTKKEQKKLRTQRRLAKEKDRQEMIRQGLIEPPK
PKVKMSNLMKVLGSEATQDPTKLEKEIRAAAAEREQAHIDRNIARKLTPAERREKKERKL
FDDSNSLETFVSVYKINDLSHPQARFKVDVNARENRLTGCAVICDGISVLVVEGGSKSIK
RYAKLMLRRINWAASVKEEEEEETDDKPVNKCSLVWQGSVAKSSFNRFSIQECMTEAAAR
KIFADAGVGHYWDFAVNFSDDQI
NT seq 2772 nt   +upstreamnt  +downstreamnt
atggatagggtttccgagaaggagaaatcaagcaagcgttctcgagaagaacgcgatcga
gaccacaagcatcgaagtcgggataccgaggataagcatttatccaaggatgaaaagcat
cgtgagtccgatcgccaccatcgccggcgacaccatcgatcggaccgtgattcgaagcgc
gagcgttcgcatgagcctcgtgaacacaaacatcggcgtgataggtctcctgatgagcgt
gaaggctcccaagaccgcgattttaagcgggaaaggtcttatgaacttagggaggagaga
gaaagaagtagggatagggattcgtctaagcgagagaagtcgaatgaacctagaggattg
agagaaggcagcgaagagcgtggcaagcttcgtgaggtgaggcgcgaggaatcagacaat
gagcgtgaacgggaagggtcgttcgagccaattcagaattccgtacgttcaaacaagagg
aaggagaggggaggaagtgaggataggtttgatggcggggagaagagggctagggcttcg
gaagttgggaatgaagtgaatggagctgagatggacgagaaaaaggagcggaggagattt
gctgacggtgaaaaagacgatggagcaaacttgagtggtagggcaaggagggaccggaag
cggtttgaggatcgagtgaaggaagaagataatggtggaaatgttgatgagaagcatgcg
aaagtgattgaatacaagtccaaaggagacgtgggggatgggaaagttcagtttggaggc
accactgatgaaaaaaggtcactggggaatggatctatggtggaacctaccgatatacca
tcagcaagtgtgccccagaatttgttacatcctagtcctttccttcctatcaaggtatct
tcaatttctaccacaaatgaaaataagggagttagtattaccagatctcatgaggttcat
ggaaaatctagtacagatgggacatcctcaactgctgggaaaagtggaaatctctctctt
gatgctttagcaaaagctaagaaagctttacagatgcagaaagaattagcggagaagttg
aagaaaattcccctgatgaagaaggttgggggttcaagttctgctaatagctcagttgtg
aaattggaggagaaagctaaacctcccactggtgtattgggtcaactgtcaactaccaat
gatgctacaactctttcaactggggtggtgtctagttcgtcgacattcccttctgctgcc
aatgctcttgatggtggtatgaatgttcctgctggccttacctctataccccatattgaa
gctgtcaagcgagctcaggagcttgctgccaggatgggatttcgccaggatccagagttt
gctcctcttataaatttgtttccagggaacatagcaactgatgttgctgttccacagaag
ccaaccaaggtccctgttcttcgtcttgacgcacttggtagggaaattgacgaacaagga
aatgttgtcaatataaccaaacccagcaaccttagcactcttaaggttaacatcaacaag
caaaaaaaggatgcatttcagatccttaaacctgaacttgatgtggatccagattcaaac
cctcattttgatgagagaatgggtataaataaaactaaactgctgaggccaaagagaatg
agtttccagtttgttgaggaagggaaatggtcgaaggaggccgaaaccttaaaattgagg
agtaaatttggagaggcacaagccaaagaacgaaaagaaaagcaggcacagttggccaag
gcaaaggctgcacctgatataaatccaaatttgattgaggtatcagagagagtggtgaag
gaaaaaacaaaagacccgattcctgaaattgagtggtgggatgtcccacttttgcattcc
agcacatatgagggtttgggagatggttttgtggccgatgacaaattaaggaaggacaag
attaccatatatgtggagcatcctcgtcctatcgaacctcctgccgagccagctcctccc
cctcctcaacccctaaagctaacaaagaaggagcagaaaaaactccgtacacagcgtcgt
ctagcaaaggagaaagatagacaggaaatgattagacaaggcctgatagaaccacctaaa
ccgaaagttaaaatgagcaatttaatgaaagttcttggctccgaagcaacccaagatccc
actaaacttgagaaagagattcgtgctgcagctgctgagagggagcaagctcacatagat
cgaaatattgcaagaaaacttacccctgcagagcgccgtgagaagaaagaacgtaaacta
tttgatgattcaaattcacttgagacatttgtgtctgtttacaagatcaacgatctatca
cacccacaggcccggtttaaagttgacgttaatgctagagagaaccgattgacagggtgt
gctgtgatatgcgatggcatcagtgttctggttgttgaagggggaagcaagtccatcaag
aggtacgcaaaacttatgctcaggcgtataaactgggctgcttctgtgaaagaggaggaa
gaggaggaaactgacgataagcccgttaacaaatgttcattggtatggcaaggaagtgtt
gccaaatctagcttcaatagattttctatccaggagtgcatgactgaggcagctgctagg
aagattttcgctgatgctggtgttggtcattactgggattttgccgttaacttttccgat
gatcaaatataa

DBGET integrated database retrieval system