Cucumis melo (muskmelon): 103500170
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Entry
103500170 CDS
T03195
Name
(RefSeq) protein RDM16 isoform X1
KO
K12843
U4/U6 small nuclear ribonucleoprotein PRP3
Organism
cmo
Cucumis melo (muskmelon)
Pathway
cmo03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
cmo00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
103500170
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
cmo03041
]
103500170
Spliceosome [BR:
cmo03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6 snRNP specific factors
103500170
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Gene cluster
GFIT
Motif
Pfam:
PRP3
Prp3_C
Motif
Other DBs
NCBI-GeneID:
103500170
NCBI-ProteinID:
XP_008461606
UniProt:
A0A1S3CF39
A0A9I9DTC6
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Position
10:complement(5720141..5725970)
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AA seq
923 aa
AA seq
DB search
MDRVSEKEKSSKRSREERDRDHKHRSRDTEDKHLSKDEKHRESDRHHRRRHHRSDRDSKR
ERSHEPREHKHRRDRSPDEREGSQDRDFKRERSYELREERERSRDRDSSKREKSNEPRGL
REGSEERGKLREVRREESDNEREREGSFEPIQNSVRSNKRKERGGSEDRFDGGEKRARAS
EVGNEVNGAEMDEKKERRRFADGEKDDGANLSGRARRDRKRFEDRVKEEDNGGNVDEKHA
KVIEYKSKGDVGDGKVQFGGTTDEKRSLGNGSMVEPTDIPSASVPQNLLHPSPFLPIKVS
SISTTNENKGVSITRSHEVHGKSSTDGTSSTAGKSGNLSLDALAKAKKALQMQKELAEKL
KKIPLMKKVGGSSSANSSVVKLEEKAKPPTGVLGQLSTTNDATTLSTGVVSSSSTFPSAA
NALDGGMNVPAGLTSIPHIEAVKRAQELAARMGFRQDPEFAPLINLFPGNIATDVAVPQK
PTKVPVLRLDALGREIDEQGNVVNITKPSNLSTLKVNINKQKKDAFQILKPELDVDPDSN
PHFDERMGINKTKLLRPKRMSFQFVEEGKWSKEAETLKLRSKFGEAQAKERKEKQAQLAK
AKAAPDINPNLIEVSERVVKEKTKDPIPEIEWWDVPLLHSSTYEGLGDGFVADDKLRKDK
ITIYVEHPRPIEPPAEPAPPPPQPLKLTKKEQKKLRTQRRLAKEKDRQEMIRQGLIEPPK
PKVKMSNLMKVLGSEATQDPTKLEKEIRAAAAEREQAHIDRNIARKLTPAERREKKERKL
FDDSNSLETFVSVYKINDLSHPQARFKVDVNARENRLTGCAVICDGISVLVVEGGSKSIK
RYAKLMLRRINWAASVKEEEEEETDDKPVNKCSLVWQGSVAKSSFNRFSIQECMTEAAAR
KIFADAGVGHYWDFAVNFSDDQI
NT seq
2772 nt
NT seq
+upstream
nt +downstream
nt
atggatagggtttccgagaaggagaaatcaagcaagcgttctcgagaagaacgcgatcga
gaccacaagcatcgaagtcgggataccgaggataagcatttatccaaggatgaaaagcat
cgtgagtccgatcgccaccatcgccggcgacaccatcgatcggaccgtgattcgaagcgc
gagcgttcgcatgagcctcgtgaacacaaacatcggcgtgataggtctcctgatgagcgt
gaaggctcccaagaccgcgattttaagcgggaaaggtcttatgaacttagggaggagaga
gaaagaagtagggatagggattcgtctaagcgagagaagtcgaatgaacctagaggattg
agagaaggcagcgaagagcgtggcaagcttcgtgaggtgaggcgcgaggaatcagacaat
gagcgtgaacgggaagggtcgttcgagccaattcagaattccgtacgttcaaacaagagg
aaggagaggggaggaagtgaggataggtttgatggcggggagaagagggctagggcttcg
gaagttgggaatgaagtgaatggagctgagatggacgagaaaaaggagcggaggagattt
gctgacggtgaaaaagacgatggagcaaacttgagtggtagggcaaggagggaccggaag
cggtttgaggatcgagtgaaggaagaagataatggtggaaatgttgatgagaagcatgcg
aaagtgattgaatacaagtccaaaggagacgtgggggatgggaaagttcagtttggaggc
accactgatgaaaaaaggtcactggggaatggatctatggtggaacctaccgatatacca
tcagcaagtgtgccccagaatttgttacatcctagtcctttccttcctatcaaggtatct
tcaatttctaccacaaatgaaaataagggagttagtattaccagatctcatgaggttcat
ggaaaatctagtacagatgggacatcctcaactgctgggaaaagtggaaatctctctctt
gatgctttagcaaaagctaagaaagctttacagatgcagaaagaattagcggagaagttg
aagaaaattcccctgatgaagaaggttgggggttcaagttctgctaatagctcagttgtg
aaattggaggagaaagctaaacctcccactggtgtattgggtcaactgtcaactaccaat
gatgctacaactctttcaactggggtggtgtctagttcgtcgacattcccttctgctgcc
aatgctcttgatggtggtatgaatgttcctgctggccttacctctataccccatattgaa
gctgtcaagcgagctcaggagcttgctgccaggatgggatttcgccaggatccagagttt
gctcctcttataaatttgtttccagggaacatagcaactgatgttgctgttccacagaag
ccaaccaaggtccctgttcttcgtcttgacgcacttggtagggaaattgacgaacaagga
aatgttgtcaatataaccaaacccagcaaccttagcactcttaaggttaacatcaacaag
caaaaaaaggatgcatttcagatccttaaacctgaacttgatgtggatccagattcaaac
cctcattttgatgagagaatgggtataaataaaactaaactgctgaggccaaagagaatg
agtttccagtttgttgaggaagggaaatggtcgaaggaggccgaaaccttaaaattgagg
agtaaatttggagaggcacaagccaaagaacgaaaagaaaagcaggcacagttggccaag
gcaaaggctgcacctgatataaatccaaatttgattgaggtatcagagagagtggtgaag
gaaaaaacaaaagacccgattcctgaaattgagtggtgggatgtcccacttttgcattcc
agcacatatgagggtttgggagatggttttgtggccgatgacaaattaaggaaggacaag
attaccatatatgtggagcatcctcgtcctatcgaacctcctgccgagccagctcctccc
cctcctcaacccctaaagctaacaaagaaggagcagaaaaaactccgtacacagcgtcgt
ctagcaaaggagaaagatagacaggaaatgattagacaaggcctgatagaaccacctaaa
ccgaaagttaaaatgagcaatttaatgaaagttcttggctccgaagcaacccaagatccc
actaaacttgagaaagagattcgtgctgcagctgctgagagggagcaagctcacatagat
cgaaatattgcaagaaaacttacccctgcagagcgccgtgagaagaaagaacgtaaacta
tttgatgattcaaattcacttgagacatttgtgtctgtttacaagatcaacgatctatca
cacccacaggcccggtttaaagttgacgttaatgctagagagaaccgattgacagggtgt
gctgtgatatgcgatggcatcagtgttctggttgttgaagggggaagcaagtccatcaag
aggtacgcaaaacttatgctcaggcgtataaactgggctgcttctgtgaaagaggaggaa
gaggaggaaactgacgataagcccgttaacaaatgttcattggtatggcaaggaagtgtt
gccaaatctagcttcaatagattttctatccaggagtgcatgactgaggcagctgctagg
aagattttcgctgatgctggtgttggtcattactgggattttgccgttaacttttccgat
gatcaaatataa
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