Cucumis melo (muskmelon): 103500319
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Entry
103500319 CDS
T03195
Name
(RefSeq) DNA-directed RNA polymerases II, IV and V subunit 11
KO
K03008
DNA-directed RNA polymerase II subunit RPB11
Organism
cmo
Cucumis melo (muskmelon)
Pathway
cmo03020
RNA polymerase
cmo03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
cmo00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
103500319
09124 Replication and repair
03420 Nucleotide excision repair
103500319
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cmo03021
]
103500319
03400 DNA repair and recombination proteins [BR:
cmo03400
]
103500319
Transcription machinery [BR:
cmo03021
]
Eukaryotic type
RNA polymerase II system
RNA polymerase II
Core subunits
103500319
DNA repair and recombination proteins [BR:
cmo03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase II complex
103500319
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_L_2
RNA_pol_L
Tup_N
Glyco_transf_99
Motif
Other DBs
NCBI-GeneID:
103500319
NCBI-ProteinID:
XP_008461807
UniProt:
A0A1S3CG10
LinkDB
All DBs
Position
4:complement(24863838..24867413)
Genome browser
AA seq
116 aa
AA seq
DB search
MNAPDRYERFVVPEGTKKVSYERDTKIINAASFTIEREEHTIGNILRMQLHRDENVLFAG
YKLPHPLQYKIIVRIHTTSQSSPMQAYNQAINDLDKELDHLKNAFEAEFAKLSRDY
NT seq
351 nt
NT seq
+upstream
nt +downstream
nt
atgaatgcccccgacagatacgagcgcttcgtcgtcccagagggcaccaaaaaggtctca
tacgagagagacacgaagatcattaatgcggcgtcgtttaccattgaaagagaggaacat
acaattggaaacatcttgcgcatgcagctgcacagagatgaaaatgtgttgtttgctgga
tataagcttcctcatcctttgcagtataaaattatcgtccggatccataccactagccaa
tcgtcgccgatgcaagcatataatcaagccatcaacgatttggacaaggagcttgatcat
ttgaaaaatgcatttgaggctgagttcgctaagctctcaagggactactga
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