Cucumis melo (muskmelon): 103500344
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Entry
103500344 CDS
T03195
Name
(RefSeq) structure-specific endonuclease subunit slx1
KO
K15078
structure-specific endonuclease subunit SLX1 [EC:3.6.1.-]
Organism
cmo
Cucumis melo (muskmelon)
Pathway
cmo03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
cmo00001
]
09120 Genetic Information Processing
09124 Replication and repair
03460 Fanconi anemia pathway
103500344
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cmo03400
]
103500344
DNA repair and recombination proteins [BR:
cmo03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Other HR factors
103500344
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GIY-YIG
T5orf172
Motif
Other DBs
NCBI-GeneID:
103500344
NCBI-ProteinID:
XP_008461838
UniProt:
A0A1S3CFH5
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All DBs
Position
4:24557364..24560807
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AA seq
169 aa
AA seq
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MRLLSQTFRCQKPPISNPRLPKSSSSSTKGPTLIVKSEETKPKQWCVYLIISSNSPIKTY
VGVTLDFDRRLKQHNGEIKGGAKATQAGRPWICACTIHGFKDQSQACEFESKWKKVSRKI
SYEKKEDDVGKQLDNQTLRLLKHRQRALGKVKCLFDCSHFEFDWKLDPF
NT seq
510 nt
NT seq
+upstream
nt +downstream
nt
atgagactgctctctcaaacatttcgttgccaaaaaccccctatttcaaatccacgacta
cccaaatcttcttcttcctcaaccaagggtccaacactgatcgttaaatcggaggagacg
aagcctaagcaatggtgtgtttatctcatcatctcctccaattcccccatcaaaacctat
gtaggggtcacccttgacttcgatcgacgtttgaaacagcataatggtgaaataaaaggt
ggtgcaaaagcaactcaagcgggacgaccctggatttgtgcgtgcacaattcatggtttt
aaagaccaaagtcaagcttgtgagtttgaatcaaaatggaaaaaagtttcaaggaaaata
tcatatgagaagaaggaggatgatgtgggaaagcaattagataatcaaacattaagatta
ctcaagcacaggcaaagagctttaggaaaagtgaagtgtctgtttgattgcagtcatttt
gagtttgattggaaattagatcctttctga
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