Cucumis melo (muskmelon): 103500468
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Entry
103500468 CDS
T03195
Name
(RefSeq) CLIP-associated protein isoform X1
KO
K16578
CLIP-associating protein 1/2
Organism
cmo
Cucumis melo (muskmelon)
Brite
KEGG Orthology (KO) [BR:
cmo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
cmo03036
]
103500468
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
cmo04812
]
103500468
Chromosome and associated proteins [BR:
cmo03036
]
Eukaryotic type
Centrosome formation proteins
Microtubules and associated factors
Microtubule-associated proteins
103500468
Cytoskeleton proteins [BR:
cmo04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulin-binding proteins
Cytoplasmic linker proteins (CLIPs)
CLIP-associating proteins
103500468
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CLASP_N
CEP104-like_TOG
XMAP215_CLASP_TOG
HEAT
HEAT_2
HEAT_EZ
Vac14_Fab1_bd
Adaptin_N
Cnd1
MMS19_C
Maestro_HEAT
Sec7-like_HUS
UTP20_C
MMS19_N
Dopey_N
V-ATPase_H_N
SEN1_N
Motif
Other DBs
NCBI-GeneID:
103500468
NCBI-ProteinID:
XP_008461995
UniProt:
A0A1S3CGF1
LinkDB
All DBs
Position
1:complement(5168165..5185650)
Genome browser
AA seq
1442 aa
AA seq
DB search
MEEALELARAKDTKERMAGVERLYELLEASRKSLNSVETTSLVDCCLDLLKDNNFRVSQG
ALQALASAAVLSGDHLKLHFNALVPAAVERLGDAKQPVREAARRLLLTLMEISSPTIIVE
RAGSYAWSHKSWRIREEFARTVTSAIGLFASTELTLQRAVLPSILQMLNDPNPGVREAAI
VCIEEMYTQAGPQLRDELQRHHLPTYMVKDINARLEKITPQVRSSEGLTGSFAVADMKPV
NINSKKNSPKAKSSNREVSLFGGETDVTEKQIDPVKVYSEKELIREIEKITSILVPDKDW
SIRIAAMQRVEGLVSGGAADYPSFRGLLKQLVGPLSTQLSDRRSSIVKQACHLLCFLSKE
LLGDFEACAEMFIPVLFKLVVITVLVIAESADNCIKTMLRNCKVSRVLPRIADSAKSDRS
AVLRARCCEYALLILEHWADAPEIQRSADLYEDLIRCCVADAMSEVRATARVLYRMFAKT
WPERSKRLFSSFDLVIQRLINEEDGGIHRRHASPSVRDRGTMMSLNSQTSTGSSLPGYGT
SAIVAMDRSSSLSSGTSLSTGLLSQSKTSVDGSERSLESVLHSSKQKVNAIESMLRGLDI
SEKHNGNLRSSSLDLGVDPPSSRDPPFPQALPASNHFSNSSTADLTASNTNKVRSRQGGL
GLSDIITQIQASKGSGKLSHRSNVVNEPLSTFSSYPSKRVVDRHQERGFVEENSDIREAK
RYITPQIEKHYLDVTYRDGNYKDSHNSYIPNFQRPLLRKNAAGRMSATRRRSFDDSQLPL
GEMSSYVDSPASLSDALSEGLNPSSDWCTRVGTFNYLQSLLQQGPKGIQEVLQNFEKVMK
LFFQHLDDPHHKVAQAALSTLADIIPTCRKPFESYMERILPHVFSRLIDPKELVRQPCST
TLEIVSKTYSTDSLLPALLRSLDEQRSPKAKLAVIEFAINSFNKHVVNSEGFSNNGILKL
WLAKLTPLVYDKNTKLKEAAITCIISVYSHFEPAAVLNYILSLSVEEQNSLRRALKQYTP
RIEVDLMNFLQNKKERQRPKSLYDPSDVVGTSSEEGYVSMSKKSQFFGRYSAGSLDDESG
RKWNMNQESTLVTRSIGQATSDELRENLYHNFDSGSSNDVINMKTKDVHYLENSTQQNLG
SRTSLVDNVDSSVNIDDLSSLHLVNGENDDGQLGIAENIAYNDEAALDLESHQHKTVTVN
SMVDTSPSIPQILHLISTGNSESPSASKCSALQQLIETSISSDPSIWTKYFNQILTVTLE
VLDNSDSSVRELALSLITEMIKNQRDSMEDSVEIVIEKLLHVTNDIFPKVSNDAEHCLTI
VLSQYDPFRCLSVIAPLLVTEDEKTLVTCINCLTKLVGRLSQEELMSQLPTFLPALFEAF
GHQSADVRKTVVFCLVDIYIMLGKQFLPHLEGLNSTQLRLVTIYANRISQARTGTTIDGS
HD
NT seq
4329 nt
NT seq
+upstream
nt +downstream
nt
atggaggaagccttggaactcgctcgtgccaaagacaccaaggagcgcatggctggtgtt
gaacgcctctatgaacttcttgaagcttctagaaagagcttgaattccgttgagactact
tccttggttgactgctgtctcgatcttctcaaggataacaactttagggtttcccagggt
gctctccaggctttggcttctgctgctgtcctctctggtgaccatctcaagctgcatttc
aatgctcttgtccctgctgctgttgagcgattgggtgatgctaagcagcctgtcagagaa
gctgctaggaggctcttgctcactctcatggagatttcttcacctacaatcattgttgaa
agagctggctcttatgcatggtcacataagagttggagaatacgagaagagttcgcaaga
actgttacatcagccattggtttatttgcatcaactgagctaacacttcagcgggccgtg
ctaccttcgattttgcagatgttgaatgatccaaatcctggagttagggaagcagctata
gtttgtattgaggaaatgtatacacaggctgggccacagttgcgtgatgagcttcagcgc
caccaccttcctacttatatggtgaaagatattaatgcccggctagaaaaaattacacct
caagttcggtcctcggaaggactgactgggagttttgcagttgcggacatgaagcctgta
aatattaactcaaagaaaaatagtccaaaggctaaaagttcgaacagagaggtttctctt
tttggaggagaaactgatgtaacagaaaaacagatagatcctgtaaaagtgtattcggag
aaggagctcattagagaaattgagaagataacttctatccttgttccagataaagattgg
tctattcgcatagcagccatgcagagagtagagggccttgtttctggaggtgctgctgac
tatccaagttttaggggattgttgaaacaactggttggacctctcagtactcaattatct
gatagaaggtctagcatagtgaagcaggcttgccatttgttatgctttttatccaaggaa
cttttgggagattttgaagcctgcgccgaaatgtttattcctgttcttttcaagctggtg
gtcatcactgttcttgtaattgcggagtctgcagataattgcataaaaacgatgctacgt
aactgtaaagtttcacgtgtgcttcctcgcatagctgatagtgcaaaaagtgatcgaagt
gctgtactacgtgcacggtgttgtgaatacgcacttctcattcttgagcattgggctgat
gcacctgagatacagcgatctgctgatttgtatgaagatctaatcaggtgttgtgtggct
gatgcaatgagtgaggttcgagccactgcacgagtattgtataggatgttcgcgaaaact
tggccagagcgttccaaacgtttattttcctcctttgaccttgtgattcaaagattaatt
aatgaagaggatgggggtatacataggcgacatgcatctccatctgttcgtgatagaggt
acaatgatgtcactcaactctcaaacatctactggttcaagcttacctggatatggaact
tctgctattgttgcaatggatagaagttcgagtttatcatctgggacatcactctctact
ggacttctgtctcagtcaaagacttctgttgatggttctgaacgtagtctggagagtgtg
ttgcactcaagcaaacagaaggtcaatgcaattgaaagcatgctcagaggcttggatata
tctgagaaacacaacggaaatcttcgatcatctagtttggatctaggagttgaccctcca
tcatctcgtgatccaccctttcctcaagctttacccgcatctaatcatttcagtaactct
tctacagctgatctaactgcgtcaaatacgaataaagtaaggagccgccaaggtggattg
ggtttatctgatatcatcactcaaattcaagcttccaaaggttctggtaaattgtcacat
cgcagcaatgtggttaatgaacctttgtctactttttcatcttacccatcaaagcgggtt
gttgaccgacaccaggaaaggggttttgtcgaggagaatagtgatattagagaagctaag
cggtatattaccccacaaattgagaagcattacttggatgtaacttatagggatgggaat
tacaaggattctcataacagttatattcccaatttccagagaccactattgagaaagaat
gcagctgggcgaatgtctgcaactaggcgtaggagttttgatgatagccagctaccactt
ggggaaatgtcaagttacgttgacagtccagcatctcttagtgatgctcttagcgagggt
cttaatccatcttctgactggtgcactagggttggcacctttaattatcttcagtctctg
ctgcagcagggtccaaaaggaatacaagaagtgcttcaaaattttgagaaggtaatgaag
ttgtttttccagcacttggacgatccacatcataaagtagcgcaggcagcactttcaaca
ctggctgatataattccaacctgccgaaagccatttgagagctatatggagaggatcttg
ccccatgttttctctcggttgattgatccaaaggagttagtaaggcaaccctgttcgaca
actttggaaattgttagtaaaacttacagtacggattctctcttacctgctctactccgt
tctttggatgaacagcgatccccaaaggcaaaactggctgttattgagtttgctatcaat
tcttttaataagcatgtagtgaattctgagggctttagtaataatggcatcctaaagtta
tggcttgcaaaattgacaccgttggtttatgataaaaacaccaaattgaaggaagcagcc
attacatgcattatatctgtttattcacactttgaaccagcagctgtcttgaattatata
cttagcctatcagttgaagaacagaattccttgagacgagcacttaaacaatatacacct
cgcattgaggtggacttgatgaacttcttacagaacaagaaagaacgtcaacgaccgaag
tccttgtatgacccatctgatgtagttggaacatcttctgaggaaggttatgttagcatg
tccaaaaagagtcaattctttggtaggtattcagctggttctcttgatgatgagagtggt
aggaagtggaatatgaaccaggaatcaaccctagtaacaaggagcattggtcaagctact
tctgatgaacttcgcgagaatttgtaccacaattttgattctggttccagcaatgatgtt
attaatatgaaaaccaaagatgtgcattatttggaaaattccacacaacagaacctggga
tcacggacaagtctggtggataatgttgatagtagtgttaatattgatgatttgtcttcc
ctgcatttggttaacggtgagaatgatgatggccaattaggaattgctgaaaacattgca
tacaacgacgaggctgctctagacctggaatctcatcaacacaaaactgtaactgtcaac
tccatggtggacacatcccctagcattcctcaaattcttcacctgatcagtactggcaat
agtgaaagcccttctgcaagcaaatgcagtgcgcttcaacagttaattgaaacttctata
agtagtgatccatccatttggaccaagtacttcaatcaaattttgacagtgacactggaa
gtgttggataattctgattcctctgtacgtgagctagctctttcattgataactgaaatg
attaagaaccagagggattctatggaagattctgttgaaatcgtgattgagaaactgctt
catgttaccaacgacatttttcccaaagtatcaaatgatgcggaacattgcctgactatt
gtgttatctcagtatgatccattcagatgcttaagcgtaattgctcctttgttggttact
gaggacgagaaaactcttgttacctgcatcaattgcttgacaaagcttgtaggacggctc
tcacaagaagagttgatgtcacagttacccacatttttgcctgctctctttgaagcattt
ggacatcagagtgctgacgtaaggaagactgttgtcttctgtcttgttgacatctacatt
atgcttgggaaacaatttttgccacatttggaaggactcaacagcactcaactacgtttg
gtcacaatttacgccaatcgaatttcgcaagctaggacgggaacaaccattgatggcagt
cacgattag
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