KEGG   Cucumis melo (muskmelon): 103500677
Entry
103500677         CDS       T03195                                 
Name
(RefSeq) sm-like protein LSM1B
  KO
K12620  U6 snRNA-associated Sm-like protein LSm1
Organism
cmo  Cucumis melo (muskmelon)
Pathway
cmo03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:cmo00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    103500677
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:cmo03019]
    103500677
Messenger RNA biogenesis [BR:cmo03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    P-body specific factors
     103500677
  mRNA degradation factors
   5'-3' decay
    Lsm complex
     103500677
SSDB
Motif
Pfam: LSM Hfq
Other DBs
NCBI-GeneID: 103500677
NCBI-ProteinID: XP_008462280
UniProt: A0A1S3CGJ0
LinkDB
Position
1:complement(37316269..37319026)
AA seq 128 aa
MSWASAEDIYLSTSLANYLDKKVLVLLRDGRKLLGILRSFDQFANAVLEGSCERVIVGDL
YSDIPLGLYVIRGENVVLLGELDLEKEELPPHMTHVSAVEIKRAQKAEREATDLKGTIRK
RLEFLDLD
NT seq 387 nt   +upstreamnt  +downstreamnt
atgtcttgggcaagcgcggaagatatctacctttcaacttctcttgccaattaccttgac
aagaaggttcttgtactacttcgagatgggcggaagctattagggatactccgttcattt
gatcaatttgctaatgctgttcttgaagggtcatgtgaaagggtgatcgttggtgacctt
tacagcgatattcctttaggtctctatgtaattcgaggggaaaacgttgttttacttggc
gagctggatttggagaaggaggagctccctccacacatgactcatgtctctgctgtggag
attaaaagggctcaaaaagcagagagagaagctacagatcttaaaggcacaattaggaaa
agattggaattccttgatctggattga

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