Cucumis melo (muskmelon): 103500677
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Entry
103500677 CDS
T03195
Name
(RefSeq) sm-like protein LSM1B
KO
K12620
U6 snRNA-associated Sm-like protein LSm1
Organism
cmo
Cucumis melo (muskmelon)
Pathway
cmo03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
cmo00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
103500677
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cmo03019
]
103500677
Messenger RNA biogenesis [BR:
cmo03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
103500677
mRNA degradation factors
5'-3' decay
Lsm complex
103500677
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LSM
Hfq
Motif
Other DBs
NCBI-GeneID:
103500677
NCBI-ProteinID:
XP_008462280
UniProt:
A0A1S3CGJ0
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Position
1:complement(37316269..37319026)
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AA seq
128 aa
AA seq
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MSWASAEDIYLSTSLANYLDKKVLVLLRDGRKLLGILRSFDQFANAVLEGSCERVIVGDL
YSDIPLGLYVIRGENVVLLGELDLEKEELPPHMTHVSAVEIKRAQKAEREATDLKGTIRK
RLEFLDLD
NT seq
387 nt
NT seq
+upstream
nt +downstream
nt
atgtcttgggcaagcgcggaagatatctacctttcaacttctcttgccaattaccttgac
aagaaggttcttgtactacttcgagatgggcggaagctattagggatactccgttcattt
gatcaatttgctaatgctgttcttgaagggtcatgtgaaagggtgatcgttggtgacctt
tacagcgatattcctttaggtctctatgtaattcgaggggaaaacgttgttttacttggc
gagctggatttggagaaggaggagctccctccacacatgactcatgtctctgctgtggag
attaaaagggctcaaaaagcagagagagaagctacagatcttaaaggcacaattaggaaa
agattggaattccttgatctggattga
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