Cucumis melo (muskmelon): 103500697
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Entry
103500697 CDS
T03195
Name
(RefSeq) transcription initiation factor TFIID subunit 12b
KO
K03126
transcription initiation factor TFIID subunit 12
Organism
cmo
Cucumis melo (muskmelon)
Pathway
cmo03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
cmo00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
103500697
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cmo03021
]
103500697
03036 Chromosome and associated proteins [BR:
cmo03036
]
103500697
Transcription machinery [BR:
cmo03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
103500697
Coactivators
SAGA/TFTC/STAGA complex
103500697
Chromosome and associated proteins [BR:
cmo03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
PCAF complex
103500697
STAGA complex
103500697
TFTC complex
103500697
SAGA complex
103500697
SLIK complex
103500697
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TFIID_20kDa
Histone
CBFD_NFYB_HMF
Motif
Other DBs
NCBI-GeneID:
103500697
NCBI-ProteinID:
XP_008462314
UniProt:
A0A1S3CI72
LinkDB
All DBs
Position
1:complement(37447045..37452888)
Genome browser
AA seq
675 aa
AA seq
DB search
MADSTSSPRPVQPNPMDPSPPPPQQQPQVQPSTTAIPQNSSNPSNSSVNPPIPSPSALVQ
SPSIDHLHPLAQISSPPLSHISLPQNQQQQQQQQLSPAVGLDYQQKPIQQQQQQQQQQQQ
QQQQQLVQQPQNASAMTNFQIQQALQRSPSMSRLNQMQPQQQQQQQQQFGMMRQPSALYS
QMNFGGASTNQQQQQQQQQPNQQQQMGTGNLSRSTLIGQGNHLPMLSGAAQYNLPSQLLA
SSKQKAGLVQGPQFQSSNSHGQALQGIQAMGMMGSMNLPSQLRANGLASPYAQQRINQGQ
IRQQLSQQSSLTSPQVQNLPRMSNLAFMNQQLTNLAQNGQPTMMQNSLQQQQWLKQMPSM
STPGSPSFRLQRQQQVLLHQQLASSSQLHQNSMSLNPQQFPQLVQQQSSMGHQQLHQQQQ
QQQQQQPQSQQQPPQQQLQQQLQQQPLHQQQQLLQQASPQQSLQPVLHQHQQHSPRIAGL
AGQKSLSLTGSHPDATASGASTPGGSSSQGTEAATQVLGKRKIQDLVSQVDPHGKLEPEV
EDLLLEIADDFIDSVTTFSCNLAKHRKSSTLESKDLLLHLEKNWQLNVPGYSSDEWKNHN
KNLSSSDVHKKRLDMIRLLKEASCVETNLNSPKEMVRQGVGMSIGPNTLTRPSPSSEQLL
SQTAGSQLLQQMMRF
NT seq
2028 nt
NT seq
+upstream
nt +downstream
nt
atggcagacagtacttcgtcgcctagaccggttcaaccgaacccgatggacccttcacca
ccaccgccgcaacaacaaccgcaagttcaaccttcaaccaccgctattcctcaaaattca
tcaaatccatcaaattcctctgtaaatcctcccattccatctccttctgcacttgttcaa
tcgccttcgattgaccatttacatccgctagctcaaatctcttctcctcctctttcgcac
atctctcttccgcaaaatcaacagcaacagcaacagcaacagttgagtcctgcggttgga
ttggattaccaacagaagcctatacagcaacagcagcagcagcagcagcaacaacaacag
caacaacagcagcaattggtgcaacaacctcagaatgcgagtgcgatgacgaatttccaa
atccagcaagctttgcagcggtctccttctatgtctcggttgaaccaaatgcagccacag
cagcaacagcagcagcagcagcagtttgggatgatgagacagccatcggcgctttatagt
cagatgaattttggtggggcttctacaaaccagcagcaacaacaacagcagcaacagcct
aaccaacaacagcaaatgggaactgggaatctgtcgcggtctacattaattggtcagggt
aaccatttgcccatgttgtctggagcggctcagtataatttgccgtcacaattactggct
tcgtcaaagcagaaggctggattagtccaaggtccacaatttcagtcaagtaactctcat
gggcaagctttgcaaggaattcaagcaatggggatgatgggttcaatgaatttgccctca
caactaagagctaatggccttgcctcgccgtatgcccaacagagaataaaccaaggtcaa
ataaggcagcaattatctcaacaaagttcactcacctctccacaggttcagaacttaccg
agaatgtcaaatcttgcatttatgaatcaacaattgaccaatttggctcagaatgggcag
ccaaccatgatgcagaactctttgcaacagcaacagtggctaaagcaaatgccatcaatg
tctacccctggctcaccttcatttcgtctgcagaggcaacaacaagtcttgctacaccag
cagctggcttcatctagtcaattgcatcaaaactccatgtcgttgaatcctcaacagttt
cctcagcttgtacagcaacagtcatccatgggacatcaacagctgcatcaacaacaacag
caacagcaacagcagcaaccgcagtcacaacaacaaccaccacaacaacagctacaacag
cagctacaacagcagccacttcatcaacaacagcagctacttcaacaagcatcaccacag
cagtctctgcaaccagtattgcatcagcatcagcagcattctcctaggatagctggactt
gcgggccagaaatctcttagtttgactggatcacatccagatgccacagcatctggcgct
agtacacctgggggaagttcaagccaagggacagaggctgcaactcaagtccttgggaag
agaaagatacaagatttggtttcacaggtagatccacatggaaagctggaacctgaagtt
gaagatcttctcttggagattgccgatgattttattgattcggttactaccttttcatgc
aatttggcaaaacaccgaaaatcctcaactttagaatccaaagatttattgctacactta
gagaagaattggcagttgaacgttcctggatattcaagtgatgagtggaagaatcacaac
aaaaatttatcatcaagtgatgtccacaagaaacgtttggacatgatacgcctattgaag
gaagcctcctgtgtcgaaacaaatttaaacagccctaaagagatggtacgacaaggggtt
ggaatgtcaattggtcccaacactctaacaaggccttcaccgagttcagaacaactatta
tcacaaacggctggttcacagttgctgcagcaaatgatgaggttttag
DBGET
integrated database retrieval system
