Cucumis melo (muskmelon): 103500816
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Entry
103500816 CDS
T03195
Name
(RefSeq) cell division cycle protein 48 homolog
KO
K13525
transitional endoplasmic reticulum ATPase
Organism
cmo
Cucumis melo (muskmelon)
Pathway
cmo04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
cmo00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
103500816
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cmo03019
]
103500816
03009 Ribosome biogenesis [BR:
cmo03009
]
103500816
04131 Membrane trafficking [BR:
cmo04131
]
103500816
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
cmo04147
]
103500816
Messenger RNA biogenesis [BR:
cmo03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Ran-mediated transport factors
103500816
Ribosome biogenesis [BR:
cmo03009
]
Eukaryotic type
Pre-60S particles
Ribosome quality control proteins
103500816
Membrane trafficking [BR:
cmo04131
]
SNARE
SNARE associated proteins
Others
103500816
Autophagy
Aggrephagy
Other aggrephagy associated proteins
103500816
Exosome [BR:
cmo04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
103500816
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA
AAA_lid_3
CDC48_N
RuvB_N
AAA_16
AAA_2
CDC48_2
AAA_5
AAA_33
AAA_22
AAA_14
TIP49
NPHP3_N
RNA_helicase
nSTAND3
AAA_28
Mg_chelatase
AAA_17
ATPase_2
AAA_18
Parvo_NS1
IstB_IS21
Viral_helicase1
ABC_tran
NACHT
AAA_7
Vps4_C
NB-ARC
AAA_24
TsaE
AAA_lid_PRS2_C
DUF815
Zeta_toxin
Sigma54_activat
Sigma54_activ_2
Zot
Motif
Other DBs
NCBI-GeneID:
103500816
NCBI-ProteinID:
XP_008462466
UniProt:
A0A1S3CHI4
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All DBs
Position
8:9005240..9011470
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AA seq
807 aa
AA seq
DB search
MANQPESSDSKGPKRDFSTAILERKKAANRLVVDEAINDDNSVVALHPDTMEKLQLFRGD
TILIKGKKRKDTICIALADDTCDEPKIRMNKVVRSNLRVRLGDVVSVHQCADVKYGKRVH
ILPVDDTIEGVTGNLFDAYLKPYFLEAYRPVRKGDLFLVRGGMRSVEFKVIETDPPEYCV
VAPDTEIFCDGEPVKREDEDRLDEVGYDDVGGVRKQMAQIRELVELPLRHPQLFKSIGVK
PPKGILLYGPPGSGKTLIARAVANETGAFFFCINGPEIMSKLAGESESNLRKAFEEAEKN
APSIIFIDEIDSIAPKREKTHGEVERRIVSQLLTLMDGLKSRAHVIVIGATNRPNSIDPA
LRRFGRFDREIDIGVPDEVGRLEVLRIHTKNMKLAEDVDLERIAKDTHGYVGADLAALCT
EAALQCIREKMDVIDLEDETIDAEILNSMAVTNEHFQTALGTSNPSALRETVVEVPNVSW
EDIGGLENVKRELQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGKTLLAKAIANECQ
ANFISVKGPELLTMWFGESEANVREIFDKARQSAPCVLFFDELDSIATQRGSSVGDAGGA
ADRVLNQLLTEMDGMSAKKTVFIIGATNRPDIIDPALLRPGRLDQLIYIPLPDEDSRHQI
FKACLRKSPVSKDVDLRALAKYTQGFSGADITEICQRACKYAIRENIEKDIERERRRRDN
PEAMEEDVEDEVAEIKAAHFEESMKFARRSVSDADIRKYQAFAQTLQQSRGFGSEFRFSD
NPSSGTAAADPFATSAGGGADDDDLYN
NT seq
2424 nt
NT seq
+upstream
nt +downstream
nt
atggcgaatcaacctgaatcctccgactccaagggtcccaagagggattttagtaccgcg
attctagaacgcaagaaagctgccaaccggcttgttgtcgatgaggccattaatgatgat
aactcggtggttgcgcttcaccctgatactatggagaagcttcaactcttccgtggcgac
acgatcttgatcaaggggaagaaaaggaaggatacaatctgcattgctcttgctgatgac
acatgtgatgagccaaaaataagaatgaacaaggttgtgagaagcaaccttcgcgtcagg
cttggagatgttgtttccgtgcatcaatgtgctgatgttaagtatggaaagcgggtacac
attcttccagtagatgatactattgaaggtgtcaccgggaatctttttgatgcatacttg
aaaccatatttcttggaagcctatcgcccagtgaggaagggtgatctcttccttgtgagg
ggaggaatgagaagtgttgagttcaaggtcattgaaactgatcctcctgaatattgtgtg
gttgcccctgatactgaaattttctgtgatggggagcctgttaaaagagaggatgaagat
agattagatgaggttggttatgatgacgttggtggtgttagaaaacaaatggcacaaatt
cgtgaattggtagaacttcctctgagacatccacagctttttaaatccattggagtaaag
ccaccaaagggaattctgctttatggaccccctggatctggaaagactttgattgccaga
gccgtagctaatgaaactggggctttctttttctgtatcaatggaccagaaattatgtca
aagttggctggagagagtgaaagcaaccttaggaaagcttttgaggaggcagaaaagaat
gctccatctatcatctttattgatgagattgattccattgctcctaagcgtgaaaaaact
catggagaagttgagagaaggattgtgtctcagctcttgacactaatggatgggttaaaa
tctcgtgcccatgtcattgttattggagctacgaatcgtccaaacagcattgatccagct
ttgagacgatttggaaggtttgatagggaaatagatattggggttcctgatgaagttggg
cgtcttgaggttcttcgtatccataccaagaacatgaagcttgctgaagatgttgacttg
gaaagaattgccaaggatacgcatgggtatgttggagctgacttggcagctctttgtacc
gaggctgcacttcaatgcattagagagaaaatggatgttattgatttggaagatgaaaca
atcgatgcagagattctgaactcaatggcagtcacaaatgagcacttccaaactgctctt
gggactagtaatccgtctgctctacgtgaaactgttgttgaagtgcctaacgtcagctgg
gaagacattggaggtcttgagaatgtcaagagagaacttcaagagactgtacaatatcca
gtggagcatcctgagaagttcgagaaatttggaatgtcaccctcaaagggagttcttttc
tatggccctcctggatgtggaaaaactcttctggccaaagctattgcaaatgagtgccag
gcaaacttcatcagtgtcaagggtcctgaattgcttacaatgtggtttggagaaagtgaa
gccaatgttcgtgaaatttttgacaaggctcgccagtctgcaccttgtgttctgttcttt
gacgagcttgactctattgccactcagagaggcagcagcgtgggagatgctggaggtgct
gctgatcgagttttgaaccaacttctgacggaaatggatggaatgtcagcaaagaaaact
gtctttataattggggcgaccaacagaccagatattatagatcctgcacttcttcgtcca
ggacgtttagatcaattgatttatattcctcttcctgacgaggattctcgtcaccaaatt
ttcaaggcttgcttgaggaagtccccagtatcaaaagatgtagaccttagagcccttgcc
aagtacactcaaggttttagtggtgctgatattacagagatctgtcagcgtgcttgcaaa
tatgctataagagagaatattgagaaagatattgagagggagaggaggagaagagacaat
cctgaggctatggaagaggatgtagaggacgaggtggcagagattaaggctgctcatttt
gaggagtcaatgaagtttgctcgcagaagtgtgagcgacgccgatattcgtaaataccag
gcatttgctcaaacactgcagcagtcgagagggtttggttcggaattcaggttctcagac
aacccttcttctggaactgcagcggctgacccgtttgcaacatcagctggtggtggggct
gatgatgatgatctttacaactag
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