Cucumis melo (muskmelon): 103501017
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Entry
103501017 CDS
T03195
Name
(RefSeq) uncharacterized protein LOC103501017 isoform X1
KO
K06176
tRNA pseudouridine13 synthase [EC:
5.4.99.27
]
Organism
cmo
Cucumis melo (muskmelon)
Brite
KEGG Orthology (KO) [BR:
cmo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
cmo03016
]
103501017
Enzymes [BR:
cmo01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.27 tRNA pseudouridine13 synthase
103501017
Transfer RNA biogenesis [BR:
cmo03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
103501017
Prokaryotic type
103501017
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruD
R3H_PUS7L
PUS7L_N
Motif
Other DBs
NCBI-GeneID:
103501017
NCBI-ProteinID:
XP_008462716
UniProt:
A0A1S3CHJ1
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Position
2:18864045..18907801
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AA seq
718 aa
AA seq
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MGWYRPGASSFTVLKPYFLCNSLTAPKLTNRSSSIAVMTTKSIGESDVGILSYISSLPGF
RGILKQRYSDFIVNEVDTDGNVVHLTSLDAPPEIVSESGPTIVHSTSQSYVSEIELFRSL
AGDSDAEILETFLKQINSGANDDISPIVFSPDTSKTHRTAVHNFFKKFKFLVTDTIDGPD
SSSKCVRVRVDSGVQNNRGRFSKKRKERGDKPFDSRGSDNWPEHVGKFLRFHLYKENKDT
QEALGLIGKMLGIQTRSFGFAGTKDKRSISTQRVTVFKQHASRIAALNDRLIGIKLGNFS
YIQEGLLLGQLLGNRFTITLRGVVANSEDVIKASAEALGTHGFINYFGLQRFGSGSVPTH
LVGASLLRGEWKGAVNMILDPREGETNEIAKAREYYKESDDIDGTLKQLPRYLVAERAIL
QCLKKCPGNYLQALKAIPRTLRMMYVHSYQSYLWNHAASMRVQKYGIDKVVVGDLVYCKE
NHTETAAVQNSEEYEDEDCGDANSYDSCHLEEMCKLGLPTERNKLVKAVTAEDVLSGNFT
IDDVVLPLPGSRVLYPANDIAEVYNDLATKDSISLTESVHNVKEFSITSMTGSYRRVFQR
PKDYEWELISYVDRNLPLAQSDLHKLLKSQSVEISKEEKIANKSKIEDSLDSTDQSVCCK
KDIQLEAGGNETEYGQGTPDPQMALKLSFTLPASSYATMAIRELLKTSTSVAFHKTLN
NT seq
2157 nt
NT seq
+upstream
nt +downstream
nt
atgggttggtaccggccaggtgcatcgtccttcactgtcctaaaaccctactttctctgt
aactctttaaccgctcccaaactcaccaatagatcttcttcgatcgcagtcatgacgacg
aaatccataggcgaatcagatgttggcatactcagttacatttcttctctccctggcttt
cgcggcattctcaagcaaaggtattctgatttcattgtgaatgaagttgacactgacgga
aatgttgttcatttgacgtcattggatgctcctccagagattgtttcggaaagcggacca
acgatagtccacagtacaagccagagttatgtttctgaaattgaattgtttagatctctt
gctggtgattctgatgctgagattttggaaacttttcttaagcaaatcaattctggtgca
aatgatgacatttcacctatcgtattctccccagatacaagcaaaactcatagaacggct
gtccacaatttctttaagaaatttaagttccttgtgaccgatactattgatggaccagat
tcttcatcaaaatgtgtccgtgtgagggtggattcaggggtgcagaataaccgaggtcgt
ttctctaagaaacgaaaagaaaggggtgataaaccctttgatagcagaggttcggacaac
tggcctgaacatgttggcaagtttctcaggtttcatctttacaaggagaacaaggacaca
caagaggcattaggacttataggaaagatgcttggcatccagacgaggtcttttggtttt
gctggcactaaggataagcgctccatctcaactcaaagggtcactgtttttaagcaacac
gcaagtagaatagctgctctgaatgatcggttgattggtatcaagttgggtaactttagc
tatatccaggaagggcttcttcttgggcagctcctgggtaacaggtttaccatcaccttg
cgaggtgttgtagctaatagtgaagacgtgatcaaagcatctgcagaagctttaggaacg
catgggtttattaattactttggcttacagcgttttggcagtggttctgtaccgactcat
cttgttggagcttcacttcttagaggagagtggaagggtgctgtcaatatgattctcgat
ccaagagaaggggaaaccaatgaaattgcaaaggcaagagaatactacaaggaaagcgat
gatattgatggaacgttgaaacaattacctcgatatttagtggctgaaagagcaatacta
caatgtttgaagaaatgtcctgggaactatttgcaggctcttaaagctatacctagaact
ttgagaatgatgtatgtgcatagttatcaaagctatttatggaatcatgcagcaagtatg
agagtgcaaaaatacgggattgacaaagtggttgttggagacttggtatactgtaaagaa
aaccacactgaaacagctgcagttcaaaattctgaagaatacgaagatgaggactgtggt
gatgctaactcatatgactcttgtcatttagaggaaatgtgcaagcttggtcttccaact
gaaagaaataagctagtgaaggctgttactgctgaagatgtcctcagtggaaactttact
attgatgatgttgttcttcctttgcctgggtcaagagtactctatcccgcaaatgatatt
gctgaagtgtataatgatttagcgactaaggactcgatcagcttgacggagtctgtacat
aatgtaaaggaattttcgattaccagtatgactggaagctatcggagagttttccaaaga
ccaaaggactacgagtgggaattgatctcatatgttgatcgtaatttacctctggcacag
agtgatttacataagcttttgaagtctcaaagtgttgaaattagtaaggaagaaaagata
gccaataaatctaaaattgaagattcattggattccacagatcaatcagtgtgctgtaaa
aaggatattcaacttgaagcaggtggaaatgaaactgaatatgggcaaggcactccggat
cctcagatggctctcaagctgagctttactctcccggcttcttcttatgctacgatggca
attagagaattgctgaaaacatcaacttctgttgctttccacaaaactttaaactag
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