Cucumis melo (muskmelon): 103501063
Help
Entry
103501063 CDS
T03195
Name
(RefSeq) nuclear pore complex protein NUP98A-like isoform X1
KO
K14297
nuclear pore complex protein Nup98-Nup96
Organism
cmo
Cucumis melo (muskmelon)
Pathway
cmo03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
cmo00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
103501063
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cmo03019
]
103501063
03036 Chromosome and associated proteins [BR:
cmo03036
]
103501063
Messenger RNA biogenesis [BR:
cmo03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
103501063
Chromosome and associated proteins [BR:
cmo03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
103501063
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nucleoporin2
Nup98_GLEBS
Motif
Other DBs
NCBI-GeneID:
103501063
NCBI-ProteinID:
XP_008462776
UniProt:
A0A1S4E3X5
LinkDB
All DBs
Position
11:7209337..7219755
Genome browser
AA seq
1035 aa
AA seq
DB search
MFGSPNPFGQPSTSPFASQPVFGQTANASNNPFAPKPFGSTSPFGSQTGNTVFGGTSTGV
FGAAQSSSPFPSTTTFGGSSSPAFGATPSTFGSSSTPAFGSSSSSSFGGSSIFGQKPLFG
GFGSTPAQTNPFGSTNQQSQPAFGSNVFGSSSPFGAPSQSAFGATSTPAFGATSTPAFGA
TSTPAFGAASTPAFGATSTPAFGATSTPAFGATSTPAFGAASTPAFGATSSPAFGSTSTP
AFGSTGNAFGSLSTPVFGSGGGFGASSTPAFGASSTPAFGASSAPAFGASSTPSFSFGST
PAFGQSTSGFGSSTFGTNTSPFGAQSSPFGAQSTSTFGTSGFGQAGFGGQRGGSRVTPYA
PTPEPDPGSGSTQAAGKLESISAMPVYKDKSHEELRWEDYQLGDKGGPLPAGQSASGVGF
GVSGGQPNPVASSTFSQSSPNPFSTSTQTNPFAPKPSGFGTFGPSTTFSFNSSAFAPSTP
SNPFASTTAASTSAFLSSTTSQFGSSSLFSSSNTQSLASQSAFSSTTSPGTNLTFPSSLN
FGNTQSSSLFQSTTPAIGQTGSAFGAPFSQSSLFSQPSSGVGGNLFSSSPSLLTSSNPMG
FGQTSAPFSMPFQPAQQQAPTSFFSNLGQAQPIGSSGFAGTSSIFGQSNFGQSPITQTPA
VQPAPATNPFGTLPAMPQMSISRPGAAPSIQYGISSMPVVDKAAPVRISSFLTPRHLSHR
RMRLPVRKYNPKNDGSPRVPFFSDDEETPSTPKADALFIPRENPRALVIRPTDQWPSKAN
LDKSLPSKDTSVRENGKIAERTSSAVNNLKDTNGNVVENGINKESIHLNKVNQKPNGVHE
DHSAPKEELYRTFAGHRAGEAAIVYEHGADIEALMPKLRHSDYYTEPKIQELAAKERAEP
GFCRHVKDFVVGRHGYGSIKFFGETDVRRLDLESIVQFNNREVIVYLDESKKPPCGQGLN
KPAEVTILNIKCVDKQTGHQYTEGPKVEKYKELLRKKTEAQGAEFISYDPVKGEWKFKVE
HFSRYNMEDNEEDWE
NT seq
3108 nt
NT seq
+upstream
nt +downstream
nt
atgtttggttctcccaacccttttgggcaaccatctactagcccttttgcatctcaacca
gtttttgggcaaactgccaacgcaagtaataatccttttgcaccaaagcctttcggcagt
acatccccatttggctcacagacaggaaatacagtatttggtggtacatcaacaggagta
tttggggcagcccagtcttcttctccctttccttccaccacaacatttggcggttcatca
tcaccagcttttggagctactccatccacttttggatcgtcatcaactcctgcatttggt
agttcatcatcttcttcatttggaggttcttccatttttgggcagaaaccactgttcgga
ggctttgggtctactcctgcccaaacaaatccgtttggaagtaccaaccagcaatctcag
ccagcattcggaagcaatgtctttggttcttcatcaccttttggtgcccctagccagtct
gcatttggagctactagcactcctgcctttggtgctacaagcacccctgcctttggtgcc
acgagcacccctgcctttggtgccgcgagcacccctgcatttggtgccacaagcactcca
gcatttggtgccacgagcaccccagcctttggcgcgacaagcaccccagcctttggtgca
gcaagcacccctgcctttggtgctacaagcagtcctgccttcggttcaacaagcacacct
gcttttggtagtactgggaatgcatttggttcgctaagcacccctgtttttggatctgga
ggtggatttggtgcttctagtactcctgcttttggagcttcaagtactcctgcttttggg
gcttccagtgctcctgcttttggagcttctagcactccatcctttagctttgggtctact
ccagcttttgggcaatctacttctggatttggtagtagtacttttggtaccaatacatct
ccttttggtgcccaaagttctccttttggagcacaatctacatctacatttggaaccagc
ggttttgggcaagctggttttggtggtcagcgaggtggcagtagagtcactccttatgca
ccaacacctgagccagatcctggaagtggcagtacgcaagcagctggaaagttggagtct
atatcagccatgcctgtctacaaagataaaagtcacgaagagttgagatgggaggattat
caattgggggacaaaggtggacctcttccagctggtcaatctgctagtggtgttggcttt
ggtgtttctggtggacagcctaaccctgtagcttcttccacgtttagtcaatcaagtccg
aatcctttttctacatctacacaaaccaatccatttgcccctaaaccttctggttttggt
acttttggaccttcaacaacgttttcatttaattcttcggcatttgctccttccactccg
tcaaacccctttgcatcgacaacagcagcatcaacatcagcttttttatcatcaacaacc
tctcagtttggcagctcatctttattcagttcatctaacactcaatcccttgcttcacaa
tctgcttttagttcaactacatctccaggaacaaatcttacatttccttccagcttaaat
tttggtaacactcaatcatcttcgctcttccaatccacaacacctgcaattgggcagaca
ggttcagcctttggcgctcccttttcacaatccagcttgtttagtcaaccttcgtctggg
gttggtgggaatcttttctctagctcgccatcactcttaacttcaagcaatccaatgggt
tttggtcaaacatctgcccctttctccatgccttttcaaccagcacaacaacaggcaccc
acttccttctttagcaacttgggtcaggctcaaccaattggttcaagtggttttgcagga
acttcaagcatttttggccagagtaattttggacaatcgcctatcacccagacccctgca
gtacaaccagcacctgctaccaatccatttgggacactccctgcaatgccacagatgtca
attagtagaccaggagcagcaccttctattcaatatggaatttccagcatgccggttgtt
gataaagcggctccagtcagaatatcatctttcttgacgcctcgccacctatctcacaga
cggatgagattgcctgtgagaaaatataatcctaagaatgatggcagtccaagggttcca
tttttcagtgatgatgaagaaacacctagcactccaaaggccgatgctctttttattccc
agagagaatcctagagcattggttattcgtcccacggatcagtggccttcaaaagccaat
ttagataaaagtttgccatcgaaggacacctcagtgcgtgaaaatgggaagattgctgaa
cgtacttcctcggccgtcaacaatttgaaggataccaatggaaatgttgttgagaatggt
attaacaaagaaagcatccatctcaacaaagttaaccaaaaacccaatggggtccatgag
gatcactctgctccaaaggaggagttgtataggacatttgcagggcacagagctggtgag
gctgccattgtttatgaacatggggcagatattgaggcattaatgccaaagcttcggcat
tcagactattataccgagccaaagattcaagaattagctgccaaagaaagggccgaacct
gggttttgccgccatgttaaagattttgtggtgggtcgccatggttatggaagcattaaa
ttctttggtgaaacagacgtgcgaaggctcgatctagagtccattgttcagtttaacaat
cgtgaggtgattgtttacctcgatgagagtaaaaaacctccttgtgggcaaggtctgaat
aagcctgctgaagtaacaatactcaacatcaaatgtgtagacaagcaaactgggcatcaa
tataccgaagggcctaaagttgagaagtacaaggagttgctaaggaagaagacagaggct
caaggcgctgagttcatatcgtacgatccagtgaaaggggagtggaaattcaaggttgaa
cacttcagcaggtataatatggaagataatgaagaagattgggaatga
DBGET
integrated database retrieval system
