KEGG   Cucumis melo (muskmelon): 103501154
Entry
103501154         CDS       T03195                                 
Name
(RefSeq) LOW QUALITY PROTEIN: uncharacterized protein LOC103501154
  KO
K12828  splicing factor 3B subunit 1
Organism
cmo  Cucumis melo (muskmelon)
Pathway
cmo03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:cmo00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    103501154
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:cmo03041]
    103501154
   03036 Chromosome and associated proteins [BR:cmo03036]
    103501154
Spliceosome [BR:cmo03041]
 Complex A
  U2 snRNP components
   U2 snRNP specific factors
    103501154
 Complex B
    103501154
 Complex C
   U2 SnRNP specific factors
    103501154
Chromosome and associated proteins [BR:cmo03036]
 Eukaryotic type
  Chromatin remodeling factors
   B-WICH complex
    103501154
SSDB
Motif
Pfam: SF3b1 PPP2R1A-like_HEAT TOR1L1_N HEAT_EZ HEAT HEAT_EF3_N HEAT_ECM29 Htt_N-HEAT_1 HEAT_2 Cnd1 XMAP215_CLASP_TOG Vac14_Fab1_bd Adaptin_N IFRD TIP120
Other DBs
NCBI-GeneID: 103501154
NCBI-ProteinID: XP_008462876
UniProt: A0A1S3CHY1
LinkDB
Position
7:complement(18545839..18550295)
AA seq 1266 aa
MDLEIAKTQEERRKMEQQLASLNSVTFDTDLYGGNDKAGYVTSIPVNEDDENLESQVNVV
GRKLASYTAPKSLLKEMPRGVDEDDDLGYKKPQRIIDREDDYRKRRLNRVISPERHDAFA
AGEKTPDPSVRTYAEVMREEALKREREETLRAIAKKKEEEEAAKASGEKPKESVASAAAP
QKRRNRWDQSQDDGGAKKAKTSDWDLPDTTPGRWDATPGRVGDATPGVGRRNRWDETPTP
GRLADLDATPAGGVTPGATPAGMTWDATPKLAGMATPTPKRQRSRWDETPATMGSATPMP
GATPAAAFTPGVTPVGGVELATPTPGAINLRGPMTPEQYNLMRWERDIEERNRPLTDEEL
DAMFPQEGYKILDPPASYVPIRTPARKLLATPTPMGTPLYAIPEENRGQQFDVPKEAPGG
LPFMKPEDYQYFGALLNEEDEEELSPEEQKERKIMKLLLKVKNGTPPQRKTALRQLTDKA
REFGAGPLFNRILPLLMQPTLEDQERHLLVKVIDRVLYKLDELVRPYVHKILVVIEPLLI
DEDYYARVEGREIISNLSKAAGLATMIAAMRPDIDNIDEYVRNTTARAFSVVASALGIPA
LLPFLKAVCQSKKSWQARHTGIKIVQQIAILIGCAVLPHLRSLVEIIEHGLNDENQKVRT
ITALSLAALAEAAAPYGIESFDSVLKPLWKGIRSHRGKVLGKVLAAFLKAIGFIIPLMDA
LYACYYTKEVMYILIREFQSPDEEMKKIVLKVVKQCVSTEGVEADYIRNDILPEFFRNFW
VRRMALDRRNYKQLVDTTVEIANKVGVADIVGRVVEDLKDESEPYRRMVMETIEKVVANL
GASDIDARLEELLIDGILYAFQEQTSDDANVMLNGFGAVVNSLGQRVKPYLPQICGTIKW
RLNNKSAKVRQQAADLISRIAVVMKQCQEEQLMGHLGVVLYEYLGEEYPEVLGSILGALK
AIVNVIGMTKMTPPIKDLLPRLTPILKNRHEKVQENCIDLVGRIADRGAEFVPAREWMRI
CFELLEMLKAHKKGIRRATVNTFGYIAKAIGPQDVLATLLNNLKVQERQNRVCTTVAIAI
VAETCSPFTVLPALMNEYRVPELNVQNGVLKSLSFLFEYIGEMGKDYIYAVTPLLEDALM
DRDLVHRQTAASAVKHMALGVAGLGCEDALVHLLNYVWPNIFETSPHVINAVMEAIEGMR
VALGAAVVLNYCLQGLFHPARKVREVYWKIYNSLYIGAQDALVASYPALEDGENNVYSRP
ELAMFI
NT seq 3801 nt   +upstreamnt  +downstreamnt
atggatttagagattgccaagacccaggaggaaaggaggaagatggagcagcagttggct
tctctcaattcagtgaccttcgatactgatctttatggtggtaatgataaagcgggttat
gtcacctccatccccgttaatgaggatgatgagaatcttgaatcccaagttaacgtggtt
ggtcggaagttggcatcctatacggccccgaagtctctgttaaaggagatgcccagaggt
gtggatgaagatgatgatttgggttataagaagccgcagaggattattgatagagaggat
gattataggaaacgtaggttgaatagggtgatttcacctgagcgccatgatgcgtttgct
gcgggtgagaagacgccggatccctctgtgaggacttatgcagaggtgatgagagaggag
gcgttgaagagggagagagaggagacgttaagggctatagctaagaagaaggaggaagag
gaagccgctaaggcatcgggagagaaaccgaaggagtcagttgcatctgctgcagctcct
cagaagaggaggaataggtgggatcaatcgcaggatgatggtggagcaaaaaaagcaaag
acctcagactgggatttgccagatacaacacccggaaggtgggatgctacaccaggccga
gttggggatgccactcccggtgtggggagaagaaataggtgggatgagaccccaactcct
gggaggttggctgatttggatgcaactccagcaggcggtgttacgcctggtgcaacaccc
gctggaatgacttgggatgcaactcctaaacttgcagggatggctacacctactccaaag
aggcagcgatcgcgatgggatgagaccccagcaacaatgggaagtgccactcctatgcct
ggagcaacccctgctgctgcatttactcccggtgtaactcctgttggaggggttgagctg
gctactccaacacctggggctatcaatttgcgtggcccgatgacccctgagcagtataat
ttgatgaggtgggagagagatattgaggagaggaaccgcccgttgactgatgaagaactt
gatgccatgtttccacaagagggatataagattctggaccctcctgcttcctatgttcca
attcgaacacctgcaaggaagttactcgccacacctactccaatgggaactcctctttat
gccatcccagaggagaatcgtggccagcagtttgatgttccaaaggaagcacctggtggc
ttgccattcatgaagcctgaggattaccaatactttggggcattgttgaatgaggaagat
gaagaggaattgtctccagaagaacagaaagagcggaagattatgaagctcttgctcaag
gttaagaatggaacacctcctcagaggaaaacggctttaaggcagcttactgataaagct
cgtgagtttggtgcaggcccattgtttaaccgcattctgccactccttatgcagcctacg
ctggaggaccaggagaggcatcttctggttaaggttattgacagagtgctttataaattg
gatgaattggttcgcccctatgtgcacaaaattcttgttgtgattgagccattgttgatt
gacgaagattactatgcacgtgtagaaggtagagaaattatatccaatcttagtaaggca
gctggtttggctactatgattgctgcaatgcgtccagatattgacaacattgatgagtac
gttaggaataccactgcaagggctttcagtgtcgttgcttctgccctaggaattcctgct
cttcttccatttttaaaagctgtgtgtcagagtaaaaaatcatggcaagcacggcatact
ggaattaagattgttcagcagattgctattctcattggttgtgcagtgctaccacatctt
aggtctcttgtagaaattatagaacacggtcttaatgatgagaaccagaaggtgaggaca
attactgcattgtctttagctgctcttgctgaggctgcagccccatatggtattgaaagc
tttgattcagtcttgaagccactgtggaagggtattagatcacaccgtggtaaggttttg
ggtaaggttttggctgctttcctgaaggcgattggttttattattcctttgatggatgcg
ttgtatgcctgctactatacaaaggaagtgatgtacattctgattcgagagttccagtca
cccgatgaagaaatgaaaaagattgttctcaaagtggttaagcagtgtgtgagtactgag
ggagtagaggctgattatatccgcaatgatattctgcctgaattctttaggaatttctgg
gttcgcagaatggcattagatcgaagaaattacaagcaacttgtggacacaactgttgag
atagcaaataaagtaggcgttgctgatatcgtaggtagagttgttgaagatctcaaggat
gaaagtgaaccttatagaagaatggttatggaaacaattgagaaagttgttgcaaacctg
ggtgcatctgatatcgatgctaggttagaagagctattgattgatggtattctttatgcc
ttccaagagcagaccagcgatgatgctaacgtgatgcttaatgggtttggcgcagttgtc
aactctcttgggcagagagtaaaaccgtatcttcctcagatttgtggtaccataaagtgg
cgattgaataacaagagtgcgaaggtgagacagcaagcagcagatcttatttcaaggatt
gcagttgttatgaaacagtgccaagaggaacagctcatgggccatcttggcgttgtcttg
tatgaatatttgggagaagaatacccggaagtcctgggttcaattttgggagctctcaag
gctatagttaatgttattggtatgacaaagatgacacctcctatcaaggatttgcttcct
agattaacaccaattttgaagaacagacatgagaaagtgcaagagaactgcatcgacctt
gttggtcgtattgctgatcgtggtgctgaatttgttccagcaagagaatggatgaggatc
tgctttgagttgcttgagatgcttaaagctcacaagaagggtatccgtcgagctactgtg
aacacttttggttatattgcgaaagccattgggccgcaagatgttttggcaacattgttg
aacaatctaaaagtgcaggagcgtcagaatcgtgtttgcactactgttgccattgctata
gttgcagaaacctgttctccattcactgttctacctgcattgatgaacgagtatcgtgtg
ccagagcttaatgtgcaaaacggcgtgttgaagtctctctctttcctttttgagtacatt
ggtgaaatgggaaaggattatatatatgctgtgacgccattgcttgaggatgctcttatg
gaccgagatttggtccacagacaaactgcagcctctgctgtgaaacatatggctctaggg
gtagccggtttaggttgtgaggatgccttagtccacttgctgaactacgtatggccaaac
atttttgaaacatcaccacatgtcataaacgctgtgatggaagccatcgaaggaatgagg
gtggcattgggtgcagccgttgtgctcaactactgcctgcaggggcttttccacccagct
cggaaagttcgagaagtatactggaaaatctacaactcactgtacattggtgctcaggat
gctcttgttgcatcttatccagcattagaggatggagaaaacaatgtgtacagccgacca
gaactggcaatgtttatctga

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