Cucumis melo (muskmelon): 103501436
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Entry
103501436 CDS
T03195
Name
(RefSeq) nuclear pore complex protein NUP88
KO
K14318
nuclear pore complex protein Nup88
Organism
cmo
Cucumis melo (muskmelon)
Pathway
cmo03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
cmo00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
103501436
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cmo03019
]
103501436
Messenger RNA biogenesis [BR:
cmo03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
103501436
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nup88
Motif
Other DBs
NCBI-GeneID:
103501436
NCBI-ProteinID:
XP_008463229
UniProt:
A0A1S3CIR9
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Position
10:complement(9517169..9523575)
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AA seq
820 aa
AA seq
DB search
MRYNFDLNEADSDPPRSLTPKRDVDWLPLKTHPVFTPAAAASTSTSSVDDYGVSVSPPLR
NLLVSDGASRLYFWDSTKLCLHRISIRLGEPEPTSVLASSPSKVLQPDVQLDFVVQKISI
NQNGSALALVGSGGLCIMYLYGHSSTRDNNTVICRTVRIGPQIYCGGHDVIRTLQVSWHP
YSNFHLGVLSSDSVFRLFNLSTDIVQPEQEYYLQPVEPGQSKNATSICPVDFSFGEDHLW
DKFSVFVLFSDGSVYILCPVVPFRSVYKCESILEIYNDAQSFGQKSPNPTAMNSSLAISW
LEETFPNLVQATDGGDAYVIVAQPCALFDASLALQGPLRRACNNGDEGDISIKGAECEGR
AVSLLYNLISKDSVLVTAWSGGQLQIDALADEIQPVWNLGSPPRVRVDPNDNILGLAMIC
EVVTRKLTNVKLDQPLDHTVWSGLPPPLLRLAIVDLALPKKMEKDSLITMFADKLMDQRI
YALHNGGIDSIILHFLPFTSQSRGQNQTMRTPSVHPVLNTCQGDTSSPFPLCGFASLSDS
LGYSWILGVTISHECIVLEMKTWNLLVPVQVSNFQYEGKSATAATGEKNESERPEIISKD
LLGGPKVVLLPQPSSTMRSVTADSIEGRSMLHQYFKLFHENYVEYAHAVYYELKQHEPKL
KRLIEDQQTRLKEAQQKLIKVEGKQQLLDERIECAIKLHNVLENRIHRLKNLPGAHKKPL
SKAEREFKSTLDHFTDVELDALHTSIDTLTARLRRFTNSSKNNNLVNQQQKMYRRNTYIQ
GSQISQLKSSLEKLSLLNAENTKKVKLVESRIQSKERNRS
NT seq
2463 nt
NT seq
+upstream
nt +downstream
nt
atgagatacaacttcgacctgaacgaagctgattctgatccccctcgttccctaacccca
aaacgggatgtcgattggcttcctctcaagacccaccccgttttcactcccgccgccgcc
gcctccacttccacctcctccgtcgacgactatggcgtttctgtttctccgcctctccga
aaccttctagtgtccgacggcgcctctcgtctctatttctgggactccaccaaactctgc
ttgcaccggatttctatccgccttggagaacccgaacccacctccgtcctcgcctcttct
ccttctaaagtattgcaaccggatgtccaacttgactttgtggtgcagaagatttctatt
aatcagaatggatcggcattggcccttgtgggttcaggcgggttgtgtataatgtacctt
tatggtcatagttctactagagataacaacactgtcatctgtaggactgttagaattggt
ccgcaaatctactgtggtggtcatgatgtcatacgcacgcttcaagtttcttggcacccg
tatagcaacttccatcttggagtcctttcatctgattctgttttcaggcttttcaatttg
tctacagatattgtgcaaccagagcaagaatattatctacagccagtggaacctggtcaa
tctaaaaatgccacatcaatctgccctgttgatttttcatttggggaagatcacttgtgg
gacaagttcagtgtgtttgttttattcagtgatggttcagtttacatcctctgcccagtt
gttccatttagaagtgtttacaagtgtgaatctatattggagatttataacgatgctcag
tcctttgggcaaaaatcacccaatccaacagctatgaattccagtcttgcaatttcttgg
ttggaagaaacttttccaaatttagttcaagcaacagatggaggagatgcatatgtgata
gtagcccagccttgtgctttatttgatgcgtcacttgcattgcaggggcctttgaggagg
gcatgtaataatggagatgaaggagatatatcaattaaaggtgcagaatgtgaaggccgt
gcagtaagtttattgtataatttaatcagcaaagactcagttcttgtgacagcttggagt
ggtgggcaactgcagattgatgcccttgcagatgaaattcaacctgtctggaatcttggt
agtcctccacgtgtacgggttgatccaaatgacaatattctcggtcttgctatgatatgt
gaagtggttacaaggaagctcaccaacgtgaagcttgatcagccacttgatcataccgtt
tggtcggggctcccaccccctttgctgaggctggctatagtagatctagcccttccaaag
aaaatggaaaaagattctcttataacaatgtttgctgataaacttatggatcaaagaatt
tatgctcttcataatggaggtatagactcgattatattgcattttctccccttcacaagt
caaagcagaggacagaaccaaactatgagaactccctctgtgcatcccgttctgaatacc
tgccagggagacacttccagcccttttcctctttgtggttttgcctcattatctgattcg
ttaggatattcttggattctgggagttaccatttctcacgaatgcattgttctagagatg
aaaacttggaaccttctagtcccagttcaggttagcaattttcaatacgagggaaaatct
gctacagcagcaacaggagagaaaaatgaaagtgaaagacctgaaattataagcaaagat
cttcttggtggacctaaggtggttctccttcctcagccatcatcaactatgcgttctgtg
actgctgattcaattgaaggtcggtccatgcttcatcagtatttcaagctcttccatgaa
aattatgtggagtatgcgcatgcggtgtactacgagctcaagcagcatgagcccaagttg
aagaggttaatcgaggaccagcaaactcgtttgaaagaggcacaacaaaaactcataaaa
gtagaggggaaacagcaattattggacgagaggatagaatgtgcaatcaaactgcacaat
gtcctggaaaatcggatacataggttgaagaacttgccaggagctcacaaaaagccgttg
tccaaagcagaaagagagttcaagtctacacttgaccactttacagatgttgagttggac
gcgttgcatacttcgatcgacacactaactgcaagactaaggagattcacaaattcttca
aagaacaacaatttagtgaaccaacaacaaaaaatgtacaggagaaacacttatatccaa
ggctctcagatctcccaactcaaatcatcacttgagaaactctccctcctcaatgctgag
aacactaaaaaggttaagctagttgaatctaggatacaaagcaaggagaggaacagatcc
tga
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