Cucumis melo (muskmelon): 103501720
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Entry
103501720 CDS
T03195
Name
(RefSeq) heterogeneous nuclear ribonucleoprotein 1
KO
K14411
RNA-binding protein Musashi
Organism
cmo
Cucumis melo (muskmelon)
Pathway
cmo03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
cmo00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
103501720
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cmo03019
]
103501720
Messenger RNA biogenesis [BR:
cmo03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
103501720
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_7
RRM_PARP14_3
Nup35_RRM_2
Motif
Other DBs
NCBI-GeneID:
103501720
NCBI-ProteinID:
XP_008463611
UniProt:
A0A1S3CK54
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All DBs
Position
12:complement(14472269..14476938)
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AA seq
476 aa
AA seq
DB search
MDPGKLFIGGISWDTDEDRLREYFRNFGEVVEVMIMRDRTTGRARGFGFVVFADPVAAAR
VVLEKHVIDGRTVEAKKAVPRDDQNILSRNNTGILGSPGPTRTKKIFVGGLASTVTESDF
KKYFDQFGTIVDVVVMYDHNTQRPRGFGFITYESEESVEKVLYKTFHELNGKMVEVKRAV
PKESSPVPNRNQLAGYPYNFGRVGSYLNGYNQGYNPTSVGGYGLRSDGRFSPVTVGRGGL
SPISPGYGMGINLDTGLNPNYGTGPSSNLSYGRVMSPSYGGNLNRYGSPNPMVYGGGGGG
NGSILSSSVQNLWGNVSNSAGTNSSHLRTFPGSGGVHTGTNSLNNIGGLWGTSASLGHGE
NGGSPFNTANLDFGNGDASFTSGTTVGYARSIGTNVSSASLYSAPNIYDEVHGNNDEGNT
FYGHSSWQSLPTELEDSSSIGFGLGNAASDVISRNNAGYTVGYGVSNRQSNRGIAA
NT seq
1431 nt
NT seq
+upstream
nt +downstream
nt
atggatcctggcaagcttttcattggtggtatttcgtgggacacggatgaagatcgtctt
cgagagtactttcggaactttggagaagtggtggaggtgatgatcatgagggatcggacc
accggccgtgcccggggctttggattcgttgtctttgctgaccctgttgctgcagcgaga
gttgtgttagaaaaacatgtaattgatggaagaactgttgaagcaaagaaggcggttcct
cgagatgatcagaacattttgagcaggaataatactggtattcttggatcacctggtcct
actcgcacaaagaagatatttgttggaggattggcatcaactgttacagagagtgacttc
aaaaagtattttgatcagtttggaacaatcgttgatgtcgttgtgatgtatgatcataat
actcagagaccaagaggttttggatttatcacttacgagtcagaggaatcggtggagaaa
gtgttatacaaaacttttcatgaactcaatggtaaaatggttgaggttaagagggctgtt
ccaaaggaatcatcaccggtgccaaatcgaaatcaattagctggatatccttacaatttt
ggtagagttggtagctatttaaatggctataatcaaggatataatccaacctcagttggg
gggtatggattgagatctgatggtagatttagtcctgttacagtcggtcgaggtggactt
tctccaattagtcctggttatggaatggggataaatcttgatacagggttgaacccaaac
tatgggacaggtcccagctctaacctcagctatggacgagtaatgagcccctcgtatggt
ggaaatttaaataggtacggtagcccaaaccccatggtatatggtggtggtggtggaggt
aatggttctattttaagctcgtcagttcagaatctgtggggaaatgtcagtaactctgct
ggtacgaattcctcacacttgaggacttttcctggctctggtggtgtgcatacaggaact
aattcattaaacaatatcggagggctttggggtacttctgcaagtttaggtcatggggaa
aatggtggttctccattcaatactgctaatcttgacttcggaaacggagatgccagcttt
acatcaggaacaactgtaggttatgctagaagcattggaactaatgtttcctcagcatct
ttgtactctgcaccaaatatttatgatgaggttcatgggaataatgatgaaggaaacaca
ttttatgggcattccagttggcagtcgttgccaacagagcttgaggattcttcctcaatt
ggttttggtcttggcaatgcagcttcagatgttattagtagaaacaatgctggttatact
gttggatacggtgtttctaatagacaatctaatagaggaattgctgcttag
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